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Search the MarkerSeek catalogue

Find pre-computed candidate plastid markers and reference plastome collections by genus, then open the full genus report for ranked markers, primers, figures, and downloads.

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Type a genus prefix, then review matching genera directly below.

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Detailed genus table

Showing 251–297 of 297 matching genera.

Genus Family Order Species Markers Primers Genome length Top marker Action
Crocus primer-ready Iridaceae Asparagales 3 18 95 151–151 kb trnR-UCU-atpA 69.3 View
Croomia primer-ready Stemonaceae Pandanales 3 15 85 154–155 kb ndhD-ccsA 75.8 View
Crotalaria primer-ready Fabaceae Fabales 4 13 65 152–153 kb trnK-UUU-rbcL 83.5 View
Croton primer-ready Euphorbiaceae Malpighiales 6 18 90 150–177 kb trnK-UUU-rps16 85.2 View
Crowea primer-ready Rutaceae Sapindales 3 22 110 156–156 kb accD-psaI 64.0 View
Crucihimalaya primer-ready Brassicaceae Brassicales 4 19 95 155–155 kb ndhK-ndhC 80.8 View
Cryptocarya primer-ready Lauraceae Laurales 5 21 110 156–157 kb ccsA-ndhD 69.2 View
Cryptocoryne primer-ready Araceae Alismatales 2 19 95 173–173 kb rpl32-ycf1 86.0 View
Cryptomeria primer-ready Cupressaceae Cupressales 2 14 75 132–132 kb ccsA-petA 70.9 View
Cryptospora primer-ready Brassicaceae Brassicales 2 18 90 153–154 kb trnH-CAC-psbA 81.0 View
Cryptotaenia primer-ready Apiaceae Apiales 2 21 105 153–154 kb trnH-GUG-psbA 76.1 View
Ctenium primer-ready Poaceae Poales 6 22 115 134–135 kb rpl32-ndhF 76.3 View
Cucumis primer-ready Cucurbitaceae Cucurbitales 11 14 70 155–156 kb ycf1 56.6 View
Cucurbita primer-ready Cucurbitaceae Cucurbitales 5 15 75 157–158 kb trnL-trnF 81.6 View
Cunninghamia primer-ready Cupressaceae Cupressales 2 15 75 135–135 kb trnI-psbA 64.2 View
Cuphea primer-ready Lythraceae Myrtales 7 20 100 159–160 kb trnC-GCA-petN 88.4 View
Cupressus primer-ready Cupressaceae Cupressales 4 13 70 128–129 kb accD-rpl23 80.1 View
Curcuma primer-ready Zingiberaceae Zingiberales 21 21 105 159–164 kb ndhF-rpl32 68.6 View
Cuscuta primer-ready Convolvulaceae Solanales 19 15 75 61–87 kb accD 83.8 View
Cyananthus primer-ready Campanulaceae Asterales 2 17 85 166–168 kb trnQ(UUG) 76.4 View
Cyanea primer-ready Campanulaceae Asterales 2 15 75 164–165 kb ORF243 80.4 View
Cyanophora primer-ready Cyanophoraceae Cyanophorales 2 16 80 131–150 kb mntA 83.5 View
Cyanotis primer-ready Commelinaceae Commelinales 2 19 95 169–171 kb trnE-UUC-trnT-GGU 87.4 View
Cyathodium primer-ready Cyathodiaceae Marchantiales 2 13 65 117–119 kb rps12 82.0 View
Cyathula primer-ready Amaranthaceae Caryophyllales 2 17 90 152–152 kb trnR-UCU 60.5 View
Cycas primer-ready Cycadaceae Cycadales 53 21 105 162–162 kb trnH-GUG-psbA 79.0 View
Cyclamen primer-ready Primulaceae Ericales 4 20 100 152–153 kb trnS-GCU-trnS-CGA 75.7 View
Cyclea primer-ready Menispermaceae Ranunculales 2 20 100 160–160 kb psbI-trnS-GCU 77.7 View
Cyclocodon primer-ready Campanulaceae Asterales 2 17 85 165–167 kb trnG-GCC-trnfM-CAU 75.5 View
Cyclopogon primer-ready Orchidaceae Asparagales 2 25 130 154–155 kb clpP-psbB 85.3 View
Cyclorhiza primer-ready Apiaceae Apiales 4 20 105 155–156 kb 5S ribosomal RNA-trnR-ACG 79.0 View
Cyclostephanos primer-ready Stephanodiscaceae Stephanodiscales 2 17 85 129–129 kb ycf89-rns 83.3 View
Cyclotella primer-ready Stephanodiscaceae Stephanodiscales 6 17 85 127–134 kb rpl6 84.5 View
Cymatocarpus primer-ready Brassicaceae Brassicales 3 24 120 155–155 kb trnL-UUA-trnF-UUC 91.7 View
Cymbaria primer-ready Orobanchaceae Lamiales 2 15 75 149–152 kb trnK-UUU-accD 86.3 View
Cymbidium primer-ready Orchidaceae Asparagales 44 13 65 150–168 kb rpoB-trnC-GCA 79.3 View
Cymbopogon primer-ready Poaceae Poales 10 18 90 140–140 kb matK-rps16 62.0 View
Cynanchum primer-ready Apocynaceae Gentianales 8 14 70 158–161 kb ndhF-rpl32 83.4 View
Cynara primer-ready Asteraceae Asterales 5 17 90 153–153 kb ndhC-trnV-UAC 52.1 View
Cynodon primer-ready Poaceae Poales 2 18 90 134–134 kb trnS-UGA 90.8 View
Cynometra primer-ready Fabaceae Fabales 4 21 105 158–160 kb ndhF-rpl32 69.9 View
Cyperus primer-ready Cyperaceae Poales 8 14 70 177–188 kb trnN-GUU-rps15 80.4 View
Cyphostemma primer-ready Vitaceae Vitales 2 16 80 159–159 kb psbC-trnS-UGA 85.1 View
Cypripedium primer-ready Orchidaceae Asparagales 9 19 95 189–246 kb trnE-UUC-trnT-GGU 89.0 View
Cyrtanthus primer-ready Amaryllidaceae Asparagales 2 20 100 159–160 kb petG-trnW-CCA 85.6 View
Cyrtomium primer-ready Dryopteridaceae Polypodiales 6 17 85 151–152 kb trnP-GGG-trnL-UAG 69.0 View
Cytisus primer-ready Fabaceae Fabales 3 20 110 151–153 kb trnG-trnS 76.8 View

Alphabetical index

Browse genera by initial letter.

What is here

Each entry combines a deduplicated reference set (one GenBank record per species) and, when available, a MarkerSeek output drop with candidate markers, hotspot detail pages, and primer pairs.

Reference set

Per-species plastome GenBank files curated upstream. Use the genus page to inspect species, genome length and GC distribution, and download individual records.

Analysis results

Where present, candidate marker tables, primer rankings, Pi and similarity figures, hotspot detail pages with alignment viewers, and packaged downloads.