primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 ACAATCTCAGCAAGTAGGCG GAGCTTAGTTTCCGTCTGGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.027276 312 661 1240-1240 0.166667 46.4 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 ACAATCTCAGCAAGTAGGCG GAGTGGGAGCTTAGTTTCCG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.027276 312 661 1246-1246 0.166667 46.4 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACAATCTCAGCAAGTAGGCG GGAGCTTAGTTTCCGTCTGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.027276 312 661 1241-1241 0.166667 46.4 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCTCAGCAAGTAGGCG GGGAGCTTAGTTTCCGTCTG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.027276 312 661 1242-1242 0.166667 46.4 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCTCAGCAAGTAGGCG TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 58.0 58.0 0.0 10.2 0.058422 312 661 1002-1002 0.166667 46.2 psbZ-trnG-UCC_p1 psbZ-trnG-UCC 1 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 38428 38750 478-483 1.000000 82.8 psbZ-trnG-UCC_p2 psbZ-trnG-UCC 2 GCTTCTCCTGATGGTTGGTC CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.3 57.8 0.0 1.1 0.425837 38428 38750 476-481 1.000000 82.4 psbZ-trnG-UCC_p3 psbZ-trnG-UCC 3 TTGCTTCTCCTGATGGTTGG TACCATTCGACCATATCCGC 20 20 50.0 50.0 57.8 57.3 0.0 0.0 0.941166 38428 38750 451-456 1.000000 78.6 psbZ-trnG-UCC_p4 psbZ-trnG-UCC 4 GCTTCTCCTGATGGTTGGTC TACCATTCGACCATATCCGC 20 20 55.0 50.0 58.3 57.3 0.0 0.0 0.992148 38428 38750 449-454 1.000000 78.3 psbZ-trnG-UCC_p5 psbZ-trnG-UCC 5 CTCCTGATGGTTGGTCAAGT CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.1 57.8 0.0 1.1 1.036941 38428 38750 472-477 1.000000 77.6 psaA-ycf3_p1 psaA-ycf3 1 CCAGGTTTAGCCCATTCCTC ATCAAGCCGCTGAGTATTGG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.099551 44137 44938 985-1008 1.000000 84.0 psaA-ycf3_p2 psaA-ycf3 2 CCAGGTTTAGCCCATTCCTC GGAAACAGGCTATAGCGCTT 20 20 55.0 50.0 57.9 58.0 0.0 18.7 0.103666 44137 44938 967-990 1.000000 84.0 psaA-ycf3_p3 psaA-ycf3 3 CCAGGTTTAGCCCATTCCTC TTGGTTGAAGATCACCAGGC 20 20 55.0 50.0 57.9 58.1 0.0 3.2 0.148893 44137 44938 918-941 1.000000 83.9 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT GGAAACAGGCTATAGCGCTT 20 20 50.0 50.0 57.9 58.0 4.1 18.7 0.160416 44137 44938 958-981 1.000000 83.6 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.156301 44137 44938 976-999 1.000000 83.5 accD_p1 accD 1 TTGGAGTTGCGATGAGAGTG CTTAGTCCACACCTGTGCTC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.170664 60570 60689 642-982 0.833333 84.0 accD_p2 accD 2 TTGGAGTTGCGATGAGAGTG AATGTGAACCCCCTGCTTTT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.186249 60570 60689 285-625 0.833333 83.8 accD_p3 accD 3 GTTCCGTTTGTGGTGAGAGT CTTAGTCCACACCTGTGCTC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.136589 60570 60689 613-759 0.666667 77.6 accD_p4 accD 4 GTTCCGTTTGTGGTGAGAGT AAATGTGAACCCCCTGCTTT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.152174 60570 60689 257-404 0.666667 77.4 accD_p5 accD 5 GTTCCGTTTGTGGTGAGAGT AATGTGAACCCCCTGCTTTT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.152174 60570 60689 256-403 0.666667 77.4 rps12-clpP_p1 rps12-clpP 1 CTGAACGAGTCGCACATACA ATGCAAGCTGTGAAACCAGA 20 20 50.0 45.0 58.0 58.0 13.6 0.0 0.037339 75282 75439 671-679 1.000000 88.8 rps12-clpP_p2 rps12-clpP 2 CTGAACGAGTCGCACATACA TGCAAGCTGTGAAACCAGAT 20 20 50.0 45.0 58.0 58.0 13.6 0.0 0.037339 75282 75439 670-678 1.000000 88.8 rps12-clpP_p3 rps12-clpP 3 CTGAACGAGTCGCACATACA TATAAACTCTCCCGGCGGAT 20 20 50.0 50.0 58.0 58.0 13.6 30.8 0.028182 75282 75439 723-731 1.000000 88.2 rps12-clpP_p4 rps12-clpP 4 TACACCGGAGCCTTTCCTTA TGCAAGCTGTGAAACCAGAT 20 20 50.0 45.0 58.1 58.0 9.5 0.0 0.073150 75282 75439 1146-1160 0.333333 54.8 rps12-clpP_p5 rps12-clpP 5 TACACCGGAGCCTTTCCTTA TATAAACTCTCCCGGCGGAT 20 20 50.0 50.0 58.1 58.0 9.5 30.8 0.063993 75282 75439 1199-1213 0.333333 54.7 rpl14-rpl16_p1 rpl14-rpl16 1 ACACATCAATTCTCGAGCCC CGGGCCGCATACTTTATGAA 20 20 50.0 50.0 58.0 58.4 7.8 15.4 0.441164 85312 85526 382-397 1.000000 82.7 rpl14-rpl16_p2 rpl14-rpl16 2 AGCATATCGGCGATTGCTAG CGGGCCGCATACTTTATGAA 20 20 50.0 50.0 58.0 58.4 35.6 15.4 0.413138 85312 85526 418-433 1.000000 82.4 rpl14-rpl16_p3 rpl14-rpl16 3 CATATCGGCGATTGCTAGCT CGGGCCGCATACTTTATGAA 20 20 50.0 50.0 58.0 58.4 28.9 15.4 0.413138 85312 85526 416-431 1.000000 82.4 rpl14-rpl16_p4 rpl14-rpl16 4 GAGCATATCGGCGATTGCTA CGGGCCGCATACTTTATGAA 20 20 50.0 50.0 58.0 58.4 36.0 15.4 0.415034 85312 85526 419-434 1.000000 82.3 rpl14-rpl16_p5 rpl14-rpl16 5 CCGCTGTTATCCGCTACATT CGGGCCGCATACTTTATGAA 20 20 50.0 50.0 58.1 58.4 0.0 15.4 0.545461 85312 85526 363-378 1.000000 82.1 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC TGAATTGAATTGGGTCCATGA 20 21 50.0 38.1 58.0 55.4 7.6 0.0 3.571201 90827 91048 357-361 1.000000 60.6 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 ATTGGCATGCATCCAGTAGG TGAATTGAATTGGGTCCATGA 20 21 50.0 38.1 58.0 55.4 21.4 0.0 3.570880 90827 91048 406-410 1.000000 59.9 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 GTTGGGCGCTTTAACCATTC TGAATTGGGTCCATGAATCT 20 20 50.0 40.0 58.0 54.3 7.6 0.0 3.741702 90827 91048 352-356 1.000000 59.3 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 ATTGGCATGCATCCAGTAGG TGAATTGGGTCCATGAATCT 20 20 50.0 40.0 58.0 54.3 21.4 0.0 3.741380 90827 91048 401-405 1.000000 58.6 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 ATTGGCATGCATCCAGTAGG TGAATTGAATTGGGTCCATGAA 20 22 50.0 36.4 58.0 56.2 21.4 0.0 3.795372 90827 91048 406-410 1.000000 58.1 ycf2_p1 ycf2 1 GATGAGTCCCCTGTCTCTGT TTCGAAGTGCTTTTCTTGCG 20 20 55.0 45.0 58.1 57.6 0.0 0.0 0.523996 97879 97998 144-199 1.000000 87.8 ycf2_p2 ycf2 2 GATGAGTCCCCTGTCTCTGT AGTGCTTTTCTTGCGCCTTA 20 20 55.0 45.0 58.1 58.4 0.0 4.2 0.536094 97879 97998 139-194 1.000000 87.7 ycf2_p3 ycf2 3 AGATGAGTCCCCTGTCTCTG TTCGAAGTGCTTTTCTTGCG 20 20 55.0 45.0 57.8 57.6 0.0 0.0 0.540938 97879 97998 145-200 1.000000 87.7 ycf2_p4 ycf2 4 AGATGAGTCCCCTGTCTCTG AGTGCTTTTCTTGCGCCTTA 20 20 55.0 45.0 57.8 58.4 0.0 4.2 0.553036 97879 97998 140-195 1.000000 87.6 ycf2_p5 ycf2 5 AGTCCCCTGTCTCTGTGTTT TTCGAAGTGCTTTTCTTGCG 20 20 50.0 45.0 58.2 57.6 0.0 0.0 0.575484 97879 97998 140-195 1.000000 87.4 ycf2-trnL-CAA_p1 ycf2-trnL-CAA 1 CCCATTCCTTAGCCGGAAAG AAATGGTAGACACGCGAGAC 20 20 55.0 50.0 58.3 58.0 5.0 15.9 0.327493 98278 98978 792-808 1.000000 89.4 ycf2-trnL-CAA_p2 ycf2-trnL-CAA 2 CCCATTCCTTAGCCGGAAAG TGAAATGGTAGACACGCGAG 20 20 55.0 50.0 58.3 58.0 5.0 15.9 0.328863 98278 98978 794-810 1.000000 89.4 ycf2-trnL-CAA_p3 ycf2-trnL-CAA 3 GCCGGAAAGATATGTGACCA AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 57.7 58.0 5.0 15.9 0.333413 98278 98978 781-797 1.000000 89.3 ycf2-trnL-CAA_p4 ycf2-trnL-CAA 4 GCCGGAAAGATATGTGACCA TGAAATGGTAGACACGCGAG 20 20 50.0 50.0 57.7 58.0 5.0 15.9 0.334784 98278 98978 783-799 1.000000 89.3 ycf2-trnL-CAA_p5 ycf2-trnL-CAA 5 ATTTCCCATTCCTTAGCCGG AAATGGTAGACACGCGAGAC 20 20 50.0 50.0 57.6 58.0 0.0 15.9 0.372803 98278 98978 796-812 1.000000 89.0 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CCTCGCAATCACTAGCCAAT CACTACGAAGAAGTTCCGGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.048789 113270 114017 1411-1485 0.833333 82.5 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 AAAAGCTCTGTCCTCCCTCT CACTACGAAGAAGTTCCGGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.045216 113270 114017 1493-1567 0.833333 82.2 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 AAAAGCTCTGTCCTCCCTCT CCACTACGAAGAAGTTCCGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.045216 113270 114017 1494-1568 0.833333 82.2 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CCTTGTTCCTACATGACCCG CACTACGAAGAAGTTCCGGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032006 113270 114017 1578-1652 0.833333 82.0 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 CCTTGTTCCTACATGACCCG CCACTACGAAGAAGTTCCGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032006 113270 114017 1579-1653 0.833333 82.0 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 CCCCGTAACTCTTCTTCAGC TAGGAACTGGGAGTGGAAGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.058919 114090 115085 988-1655 0.833333 84.9 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 CCCGTAACTCTTCTTCAGCC TAGGAACTGGGAGTGGAAGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.058919 114090 115085 987-1654 0.833333 84.9 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 GCCCCGTAACTCTTCTTCAG TAGGAACTGGGAGTGGAAGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.058919 114090 115085 989-1656 0.833333 84.9 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 CCCCGTAACTCTTCTTCAGC CAAGAGGTCGTGTGAACCAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.063436 114090 115085 1441-2108 0.833333 84.8 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 CCCGTAACTCTTCTTCAGCC CAAGAGGTCGTGTGAACCAA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.063436 114090 115085 1440-2107 0.833333 84.8 ycf1_p1 ycf1 1 AAGCAGCACAAATTCTGGGA TCAACGTTGGACAGCTGAAA 20 20 45.0 45.0 58.0 58.0 0.0 27.0 0.031610 129234 129353 578-598 1.000000 90.5 ycf1_p2 ycf1 2 AGCAGCACAAATTCTGGGAA TCAACGTTGGACAGCTGAAA 20 20 45.0 45.0 58.0 58.0 0.0 27.0 0.031610 129234 129353 577-597 1.000000 90.5 ycf1_p3 ycf1 3 GTAGCTCAATGGCACGATCA TCAACGTTGGACAGCTGAAA 20 20 50.0 45.0 58.1 58.0 0.0 27.0 0.091284 129234 129353 815-835 1.000000 88.2 ycf1_p4 ycf1 4 TGCTTAATTTGTTGCCCCCT TCAACGTTGGACAGCTGAAA 20 20 45.0 45.0 58.0 58.0 0.0 27.0 0.053976 129234 129353 1054-1074 1.000000 87.4 ycf1_p5 ycf1 5 GCGTTCTTTGCTCCACAATC TCAACGTTGGACAGCTGAAA 20 20 50.0 45.0 58.0 58.0 0.0 27.0 0.062155 129234 129353 797-809 0.500000 63.6 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 CACTACGAAGAAGTTCCGGG CCTTGTTCCTACATGACCCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032006 133751 134498 1578-1652 1.000000 91.7 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 CCACTACGAAGAAGTTCCGG CCTTGTTCCTACATGACCCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032006 133751 134498 1579-1653 1.000000 91.7 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 CACTACGAAGAAGTTCCGGG AAAAGCTCTGTCCTCCCTCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.045216 133751 134498 1493-1567 1.000000 91.6 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 CCACTACGAAGAAGTTCCGG AAAAGCTCTGTCCTCCCTCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.045216 133751 134498 1494-1568 1.000000 91.6 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 CACTACGAAGAAGTTCCGGG CCTCGCAATCACTAGCCAAT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.048789 133751 134498 1411-1485 1.000000 91.6 rrn16-trnV-GAC_p1 rrn16-trnV-GAC 1 CCGACTTGCATGTGTTAAGC GGCAGGGAGGGGATATAACT 20 20 50.0 55.0 57.8 58.0 10.4 0.0 0.293591 142085 142342 394-414 1.000000 86.4 rrn16-trnV-GAC_p2 rrn16-trnV-GAC 2 CCGACTTGCATGTGTTAAGC CGTGGTGGAAGTCATCAGTT 20 20 50.0 50.0 57.8 57.8 10.4 0.0 0.417143 142085 142342 352-372 1.000000 86.0 rrn16-trnV-GAC_p3 rrn16-trnV-GAC 3 CCGACTTGCATGTGTTAAGC TTGACGTGGTGGAAGTCATC 20 20 50.0 50.0 57.8 57.8 10.4 0.0 0.411129 142085 142342 356-376 1.000000 85.9 rrn16-trnV-GAC_p4 rrn16-trnV-GAC 4 GCAGGTTCTTACGCGTTACT GGCAGGGAGGGGATATAACT 20 20 50.0 55.0 58.3 58.0 20.8 0.0 0.339837 142085 142342 447-467 1.000000 85.5 rrn16-trnV-GAC_p5 rrn16-trnV-GAC 5 TTCTTACGCGTTACTCACCC GGCAGGGAGGGGATATAACT 20 20 50.0 55.0 57.6 58.0 20.8 0.0 0.398783 142085 142342 442-462 1.000000 85.1 trnL-CAA-ycf2_p1 trnL-CAA-ycf2 1 AAATGGTAGACACGCGAGAC CCCATTCCTTAGCCGGAAAG 20 20 50.0 55.0 58.0 58.3 15.9 5.0 0.327493 148790 149490 792-808 1.000000 89.4 trnL-CAA-ycf2_p2 trnL-CAA-ycf2 2 TGAAATGGTAGACACGCGAG CCCATTCCTTAGCCGGAAAG 20 20 50.0 55.0 58.0 58.3 15.9 5.0 0.328863 148790 149490 794-810 1.000000 89.4 trnL-CAA-ycf2_p3 trnL-CAA-ycf2 3 AAATGGTAGACACGCGAGAC GCCGGAAAGATATGTGACCA 20 20 50.0 50.0 58.0 57.7 15.9 5.0 0.333413 148790 149490 660-797 1.000000 89.3 trnL-CAA-ycf2_p4 trnL-CAA-ycf2 4 TGAAATGGTAGACACGCGAG GCCGGAAAGATATGTGACCA 20 20 50.0 50.0 58.0 57.7 15.9 5.0 0.334784 148790 149490 662-799 1.000000 89.3 trnL-CAA-ycf2_p5 trnL-CAA-ycf2 5 AAATGGTAGACACGCGAGAC ATTTCCCATTCCTTAGCCGG 20 20 50.0 50.0 58.0 57.6 15.9 0.0 0.372803 148790 149490 796-812 1.000000 89.0 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 TGAATTGAATTGGGTCCATGA GTTGGGCGCTTTAACCATTC 21 20 38.1 50.0 55.4 58.0 0.0 7.6 3.571201 156720 156941 357-361 1.000000 60.3 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 TGAATTGAATTGGGTCCATGA ATTGGCATGCATCCAGTAGG 21 20 38.1 50.0 55.4 58.0 0.0 21.4 3.570880 156720 156941 406-410 1.000000 59.7 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 TGAATTGGGTCCATGAATCT GTTGGGCGCTTTAACCATTC 20 20 40.0 50.0 54.3 58.0 0.0 7.6 3.741702 156720 156941 352-356 1.000000 59.0 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 TGAATTGGGTCCATGAATCT ATTGGCATGCATCCAGTAGG 20 20 40.0 50.0 54.3 58.0 0.0 21.4 3.741380 156720 156941 401-405 1.000000 58.4 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 TGAATTGAATTGGGTCCATGAA ATTGGCATGCATCCAGTAGG 22 20 36.4 50.0 56.2 58.0 0.0 21.4 3.795372 156720 156941 406-410 1.000000 57.9