Hotspot

trnT_UGU-trnL_UAA

LSC · 45643-46537 · 895 bp

Back to Ypsilandra

Pi 0.0146
MarkerSeek score 60.30
Primer available yes
Label trnT_UGU-trnL_UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT_UGU-trnL_UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 945-950 bp 1.0 80.4
trnT_UGU-trnL_UAA_p2 GCGATGCTCTAACCTCTGAG TTTCCATGCCAAGGCTCAAT 55.0 45.0 57.9 58.1 986-991 bp 1.0 79.9
trnT_UGU-trnL_UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 953-958 bp 1.0 79.9
trnT_UGU-trnL_UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 977-982 bp 1.0 79.5
trnT_UGU-trnL_UAA_p5 GCGATGCTCTAACCTCTGAG ACTTAGCAGGTTTCCATGCC 55.0 50.0 57.9 58.2 996-1001 bp 1.0 79.1