feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 110 1171 -1 1062 LSC 0.001695 4 0 20 57 no 0.400000 3 0.666667 0.001695 1.000000 35.200000 IGS_001 igs psbA|matK psbA-matK 1172 1778 0 607 LSC 0.003300 5 1 137 246 no 0.200000 2 0.500000 0.003300 0.998353 41.700000 matK gene matK matK 1779 3326 -1 1548 LSC 0.001680 6 0 36 300 no 0.400000 3 0.666667 0.001680 1.000000 36.300000 IGS_002 igs matK|rps16 matK-rps16 3327 4992 0 1666 LSC 0.003181 12 25 27 300 no 1.000000 5 1.000000 0.003078 1.000000 49.500000 rps16 gene rps16 rps16 4993 5976 -1 984 LSC 0.003455 8 7 43 98 no 0.600000 4 0.750000 0.003473 0.993902 42.700000 IGS_003 igs rps16|trnQ-TTG rps16-trnQ-TTG 5977 7326 0 1350 LSC 0.005310 16 15 296 131 yes 0.600000 4 0.750000 0.005316 0.989630 50.900000 trnQ-TTG tRNA trnQ-TTG trnQ-TTG 7327 7399 -1 73 LSC 0.000000 0 0 3 58 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_004 igs trnQ-TTG|psbK trnQ-TTG-psbK 7400 7808 0 409 LSC 0.005405 5 2 76 190 no 0.400000 3 0.666667 0.005405 0.995110 38.600000 psbK gene psbK psbK 7809 7994 1 186 LSC 0.000000 0 0 73 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_005 igs psbK|psbI psbK-psbI 7995 8521 0 527 LSC 0.007211 9 0 259 96 no 0.600000 4 0.750000 0.007211 1.000000 47.300000 psbI gene psbI psbI 8522 8632 1 111 LSC 0.003604 1 0 49 68 no 0.200000 2 0.500000 0.003604 1.000000 28.900000 IGS_006 igs psbI|trnS-GCT psbI-trnS-GCT 8633 8770 0 138 LSC 0.005882 2 3 14 39 no 0.400000 3 0.666667 0.005915 0.978261 33.700000 trnS-GCT tRNA trnS-GCT trnS-GCT 8771 8858 -1 88 LSC 0.004545 1 0 53 83 no 0.200000 2 0.500000 0.004545 1.000000 29.900000 IGS_007 igs trnS-GCT|trnR-TCT trnS-GCT-trnR-TCT 8859 10678 0 1820 LSC 0.004620 20 15 48 182 no 0.600000 4 0.750000 0.004647 0.991758 43.400000 trnR-TCT tRNA trnR-TCT trnR-TCT 10679 10750 1 72 LSC 0.000000 0 0 93 110 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_008 igs trnR-TCT|atpA trnR-TCT-atpA 10751 10865 0 115 LSC 0.003509 1 1 165 171 no 0.400000 3 0.666667 0.003509 0.991304 42.100000 atpA gene atpA atpA 10866 12389 -1 1524 LSC 0.001181 4 0 4 211 no 0.400000 3 0.666667 0.001181 1.000000 33.600000 IGS_009 igs atpA|atpF atpA-atpF 12390 12453 0 64 LSC 0.000000 0 0 300 147 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 atpF gene atpF atpF 12454 13819 -1 1366 LSC 0.005987 19 15 300 7 yes 0.400000 3 0.666667 0.005842 0.990483 38.500000 IGS_010 igs atpF|atpH atpF-atpH 13820 14328 0 509 LSC 0.003929 5 15 24 98 no 0.400000 3 0.666667 0.004013 1.000000 38.900000 atpH gene atpH atpH 14329 14574 -1 246 LSC 0.001626 1 0 45 164 no 0.200000 2 0.500000 0.001626 1.000000 27.100000 IGS_011 igs atpH|atpI atpH-atpI 14575 15718 0 1144 LSC 0.003022 7 21 147 300 no 0.400000 3 0.666667 0.003027 0.981643 47.300000 atpI gene atpI atpI 15719 16456 -1 738 LSC 0.000000 0 0 152 58 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_012 igs atpI|rps2 atpI-rps2 16457 16728 0 272 LSC 0.001471 1 0 300 108 no 0.200000 2 0.500000 0.001471 1.000000 31.700000 rps2 gene rps2 rps2 16729 17445 -1 717 LSC 0.001953 3 0 213 300 no 0.400000 3 0.666667 0.001953 1.000000 48.900000 IGS_013 igs rps2|rpoC2 rps2-rpoC2 17446 17682 0 237 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoC2 gene rpoC2 rpoC2 17683 21819 -1 4137 LSC 0.001209 12 0 300 93 no 0.400000 3 0.666667 0.001209 1.000000 35.500000 IGS_014 igs rpoC2|rpoC1 rpoC2-rpoC1 21820 22009 0 190 LSC 0.006316 3 0 300 8 no 0.200000 2 0.500000 0.006316 1.000000 27.900000 rpoC1 gene rpoC1 rpoC1 22010 24798 -1 2789 LSC 0.001943 12 10 5 300 no 0.600000 4 0.750000 0.001943 0.996414 35.700000 IGS_015 igs rpoC1|rpoB rpoC1-rpoB 24799 24824 0 26 LSC 0.000000 0 0 282 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoB gene rpoB rpoB 24825 28046 -1 3222 LSC 0.001241 9 0 300 238 no 0.400000 3 0.666667 0.001241 1.000000 44.900000 IGS_016 igs rpoB|trnC-GCA rpoB-trnC-GCA 28047 29266 0 1220 LSC 0.002002 6 38 164 88 no 0.600000 4 0.750000 0.002022 0.971311 47.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 29267 29347 1 81 LSC 0.000000 0 0 161 7 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_017 igs trnC-GCA|petN trnC-GCA-petN 29348 30196 0 849 LSC 0.007538 14 0 242 100 no 0.600000 4 0.750000 0.007538 1.000000 49.200000 petN gene petN petN 30197 30286 1 90 LSC 0.000000 0 0 7 10 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_018 igs petN|psbM petN-psbM 30287 31600 0 1314 LSC 0.008869 29 7 97 273 yes 0.400000 3 0.666667 0.008874 0.995434 47.000000 psbM gene psbM psbM 31601 31705 -1 105 LSC 0.000000 0 0 235 168 no 0.000000 1 0.000000 0.000000 1.000000 31.400000 IGS_019 igs psbM|trnD-GTC psbM-trnD-GTC 31706 32791 0 1086 LSC 0.005166 14 3 300 90 yes 0.400000 3 0.666667 0.005170 0.997238 43.400000 trnD-GTC tRNA trnD-GTC trnD-GTC 32792 32865 -1 74 LSC 0.000000 0 0 27 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_020 igs trnD-GTC|trnY-GTA trnD-GTC-trnY-GTA 32866 33317 0 452 LSC 0.009292 8 1 101 300 no 0.400000 3 0.666667 0.007314 0.997788 43.600000 trnY-GTA tRNA trnY-GTA trnY-GTA 33318 33401 -1 84 LSC 0.000000 0 0 57 242 no 0.000000 1 0.000000 0.000000 1.000000 23.000000 IGS_021 igs trnY-GTA|trnE-TTC trnY-GTA-trnE-TTC 33402 33455 0 54 LSC 0.000000 0 0 141 188 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 trnE-TTC tRNA trnE-TTC trnE-TTC 33456 33528 -1 73 LSC 0.000000 0 0 195 115 no 0.000000 1 0.000000 0.000000 1.000000 27.400000 IGS_022 igs trnE-TTC|trnT-GGT trnE-TTC-trnT-GGT 33529 34439 0 911 LSC 0.009643 17 96 268 86 yes 0.600000 4 0.750000 0.009306 0.920966 52.500000 trnT-GGT tRNA trnT-GGT trnT-GGT 34440 34511 1 72 LSC 0.000000 0 0 61 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_023 igs trnT-GGT|psbD trnT-GGT-psbD 34512 35832 0 1321 LSC 0.008589 25 28 133 54 yes 0.600000 4 0.750000 0.008310 0.986374 48.600000 psbD gene psbD psbD 35833 36894 1 1062 LSC 0.000753 2 0 53 57 no 0.400000 3 0.666667 0.000753 1.000000 37.000000 psbC gene psbC psbC 36842 38263 1 1422 LSC 0.001969 7 0 300 57 no 0.400000 3 0.666667 0.001969 1.000000 38.300000 IGS_025 igs psbC|trnS-TGA psbC-trnS-TGA 38264 38408 0 145 LSC 0.037241 8 2 273 9 yes 0.600000 4 0.750000 0.031444 0.993103 55.800000 trnS-TGA tRNA trnS-TGA trnS-TGA 38409 38500 -1 92 LSC 0.006522 1 0 45 13 no 0.000000 2 0.000000 0.006522 1.000000 24.000000 IGS_026 igs trnS-TGA|psbZ trnS-TGA-psbZ 38501 38867 0 367 LSC 0.005450 5 0 82 156 yes 0.400000 3 0.666667 0.005450 1.000000 38.000000 psbZ gene psbZ psbZ 38868 39056 1 189 LSC 0.002116 1 0 109 30 no 0.200000 2 0.500000 0.002116 1.000000 26.400000 IGS_027 igs psbZ|trnG-GCC psbZ-trnG-GCC 39057 39306 0 250 LSC 0.008000 4 0 32 194 no 0.400000 3 0.666667 0.008000 1.000000 34.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 39307 39377 1 71 LSC 0.000000 0 0 133 123 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 IGS_028 igs trnG-GCC|trnfM-CAT trnG-GCC-trnfM-CAT 39378 39553 0 176 LSC 0.002273 1 4 204 84 no 0.400000 3 0.666667 0.002312 0.977273 36.400000 trnfM-CAT tRNA trnfM-CAT trnfM-CAT 39554 39627 -1 74 LSC 0.000000 0 0 52 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_029 igs trnfM-CAT|rps14 trnfM-CAT-rps14 39628 39783 0 156 LSC 0.005128 2 1 126 300 no 0.400000 3 0.666667 0.005149 1.000000 40.400000 rps14 gene rps14 rps14 39784 40086 -1 303 LSC 0.000000 0 0 88 300 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_030 igs rps14|psaB rps14-psaB 40087 40229 0 143 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaB gene psaB psaB 40230 42434 -1 2205 LSC 0.001361 7 0 300 300 no 0.400000 3 0.666667 0.001361 1.000000 47.000000 IGS_031 igs psaB|psaA psaB-psaA 42435 42459 0 25 LSC 0.000000 0 0 185 300 no 0.000000 1 0.000000 0.000000 1.000000 32.600000 psaA gene psaA psaA 42460 44712 -1 2253 LSC 0.001243 6 0 210 255 no 0.400000 3 0.666667 0.001243 1.000000 46.800000 IGS_032 igs psaA|ycf3 psaA-ycf3 44713 45365 0 653 LSC 0.002492 3 11 300 229 yes 0.400000 3 0.666667 0.002492 0.983155 50.700000 ycf3 gene ycf3 ycf3 45366 47364 -1 1999 LSC 0.001701 8 0 120 111 no 0.400000 3 0.666667 0.001701 1.000000 41.100000 IGS_033 igs ycf3|trnS-GGA ycf3-trnS-GGA 47365 47999 0 635 LSC 0.004094 5 3 47 139 no 0.600000 4 0.750000 0.002684 0.996850 43.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 48000 48086 1 87 LSC 0.000000 0 0 300 52 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_034 igs trnS-GGA|rps4 trnS-GGA-rps4 48087 48370 0 284 LSC 0.004225 2 0 300 192 no 0.200000 3 0.333333 0.004225 1.000000 39.700000 rps4 gene rps4 rps4 48371 48976 -1 606 LSC 0.003960 5 0 194 300 no 0.400000 3 0.666667 0.003960 1.000000 49.900000 IGS_035 igs rps4|trnT-TGT rps4-trnT-TGT 48977 49405 0 429 LSC 0.000939 1 3 83 300 no 0.400000 3 0.666667 0.000939 0.993007 36.500000 trnT-TGT tRNA trnT-TGT trnT-TGT 49406 49478 -1 73 LSC 0.000000 0 0 65 300 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 IGS_036 igs trnT-TGT|trnF-GAA trnT-TGT-trnF-GAA 49479 51507 0 2029 LSC 0.003462 14 66 138 124 no 0.600000 4 0.750000 0.003405 0.994086 50.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 51508 51580 1 73 LSC 0.000000 0 0 72 51 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_037 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 51581 52156 0 576 LSC 0.004514 6 0 145 300 no 0.400000 3 0.666667 0.004514 1.000000 46.200000 ndhJ gene ndhJ ndhJ 52157 52636 -1 480 LSC 0.000000 0 0 151 71 no 0.000000 1 0.000000 0.000000 1.000000 27.800000 IGS_038 igs ndhJ|ndhK ndhJ-ndhK 52637 52740 0 104 LSC 0.009615 1 2 300 300 yes 0.600000 4 0.750000 0.000962 0.990385 52.600000 ndhK gene ndhK ndhK 52741 53493 -1 753 LSC 0.000531 1 0 32 59 no 0.200000 2 0.500000 0.000531 1.000000 31.600000 ndhC gene ndhC ndhC 53484 53846 -1 363 LSC 0.004132 3 0 22 27 no 0.400000 3 0.666667 0.004132 1.000000 32.100000 IGS_040 igs ndhC|trnM-CAT ndhC-trnM-CAT 53847 56410 0 2564 LSC 0.008506 42 96 210 148 yes 0.600000 4 0.750000 0.008658 0.998440 55.400000 trnM-CAT tRNA trnM-CAT trnM-CAT 56411 56482 1 72 LSC 0.000000 0 0 69 76 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 IGS_041 igs trnM-CAT|atpE trnM-CAT-atpE 56483 56666 0 184 LSC 0.005435 2 0 141 66 no 0.400000 3 0.666667 0.005435 1.000000 35.000000 atpE gene atpE atpE 56667 57074 -1 408 LSC 0.000980 1 0 36 26 no 0.200000 2 0.500000 0.000980 1.000000 27.400000 atpB gene atpB atpB 57071 58558 -1 1488 LSC 0.002016 7 0 300 70 no 0.400000 3 0.666667 0.002016 1.000000 39.200000 IGS_043 igs atpB|rbcL atpB-rbcL 58559 59356 0 798 LSC 0.002509 5 2 216 104 no 0.400000 3 0.666667 0.002512 0.997494 42.400000 rbcL gene rbcL rbcL 59357 60820 1 1464 LSC 0.001776 6 0 88 54 no 0.400000 3 0.666667 0.001776 1.000000 37.900000 IGS_044 igs rbcL|accD rbcL-accD 60821 61656 0 836 LSC 0.002481 4 30 249 59 no 0.600000 4 0.750000 0.002481 0.964115 45.500000 accD gene accD accD 61657 63189 1 1533 LSC 0.003001 10 0 300 143 no 0.400000 3 0.666667 0.003001 1.000000 45.300000 IGS_045 igs accD|psaI accD-psaI 63190 63692 0 503 LSC 0.006413 7 4 15 84 no 0.600000 4 0.750000 0.006413 0.992048 40.700000 psaI gene psaI psaI 63693 63803 1 111 LSC 0.003604 1 0 188 159 no 0.200000 2 0.500000 0.003604 1.000000 37.200000 IGS_046 igs psaI|ycf4 psaI-ycf4 63804 64148 0 345 LSC 0.003478 3 0 26 300 no 0.400000 3 0.666667 0.003478 1.000000 31.800000 ycf4 gene ycf4 ycf4 64149 64703 1 555 LSC 0.000000 0 0 99 38 no 0.000000 1 0.000000 0.000000 1.000000 26.900000 IGS_047 igs ycf4|cemA ycf4-cemA 64704 65126 0 423 LSC 0.007317 6 13 300 40 no 0.400000 3 0.666667 0.007317 0.969267 39.600000 cemA gene cemA cemA 65127 65816 1 690 LSC 0.000873 1 3 176 33 no 0.400000 3 0.666667 0.000873 0.995652 35.900000 IGS_048 igs cemA|petA cemA-petA 65817 66069 0 253 LSC 0.012648 6 0 300 300 yes 0.600000 4 0.750000 0.012648 1.000000 53.700000 petA gene petA petA 66070 67032 1 963 LSC 0.000831 2 0 49 80 no 0.200000 2 0.500000 0.000831 1.000000 33.100000 IGS_049 igs petA|psbJ petA-psbJ 67033 67921 0 889 LSC 0.003167 6 5 300 86 no 0.400000 3 0.666667 0.003167 0.994376 41.700000 psbJ gene psbJ psbJ 67922 68044 -1 123 LSC 0.003252 1 0 161 300 no 0.200000 2 0.500000 0.003252 1.000000 37.100000 IGS_050 igs psbJ|psbL psbJ-psbL 68045 68165 0 121 LSC 0.000000 0 0 36 300 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 psbL gene psbL psbL 68166 68282 -1 117 LSC 0.000000 0 0 157 212 no 0.000000 1 0.000000 0.000000 1.000000 30.500000 IGS_051 igs psbL|psbF psbL-psbF 68283 68304 0 22 LSC 0.000000 0 0 274 190 no 0.000000 1 0.000000 0.000000 1.000000 33.000000 psbF gene psbF psbF 68305 68424 -1 120 LSC 0.000000 0 0 296 70 no 0.000000 1 0.000000 0.000000 1.000000 24.000000 IGS_052 igs psbF|psbE psbF-psbE 68425 68434 0 10 LSC 0.000000 0 0 300 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 psbE gene psbE psbE 68435 68686 -1 252 LSC 0.003175 2 0 300 40 no 0.200000 2 0.500000 0.003175 1.000000 27.900000 IGS_053 igs psbE|petL psbE-petL 68687 69898 0 1212 LSC 0.011848 31 21 119 174 yes 0.600000 4 0.750000 0.010903 0.995875 55.600000 petL gene petL petL 69899 69994 1 96 LSC 0.000000 0 0 132 78 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 IGS_054 igs petL|petG petL-petG 69995 70169 0 175 LSC 0.004571 2 0 228 300 no 0.400000 3 0.666667 0.004571 1.000000 44.700000 petG gene petG petG 70170 70283 1 114 LSC 0.000000 0 0 16 203 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_055 igs petG|trnW-CCA petG-trnW-CCA 70284 70403 0 120 LSC 0.000000 0 0 130 83 no 0.000000 1 0.000000 0.000000 1.000000 25.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 70404 70477 -1 74 LSC 0.000000 0 0 250 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_056 igs trnW-CCA|trnP-TGG trnW-CCA-trnP-TGG 70478 70642 0 165 LSC 0.006061 2 0 300 300 no 0.200000 3 0.333333 0.006061 1.000000 41.700000 trnP-TGG tRNA trnP-TGG trnP-TGG 70643 70716 -1 74 LSC 0.000000 0 1 117 300 no 0.200000 2 0.500000 0.000000 1.000000 32.900000 IGS_057 igs trnP-TGG|psaJ trnP-TGG-psaJ 70717 71094 0 378 LSC 0.001058 1 0 191 264 no 0.200000 2 0.500000 0.001058 1.000000 39.300000 psaJ gene psaJ psaJ 71095 71223 1 129 LSC 0.000000 0 0 47 135 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 IGS_058 igs psaJ|rpl33 psaJ-rpl33 71224 71881 0 658 LSC 0.004673 7 17 176 215 yes 0.600000 4 0.750000 0.004675 0.975684 55.200000 rpl33 gene rpl33 rpl33 71882 72082 1 201 LSC 0.000000 0 0 142 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_059 igs rpl33|rps18 rpl33-rps18 72083 72276 0 194 LSC 0.004124 2 0 300 300 no 0.200000 2 0.500000 0.004124 1.000000 40.600000 rps18 gene rps18 rps18 72277 72612 1 336 LSC 0.000000 0 0 97 120 no 0.000000 1 0.000000 0.000000 1.000000 26.800000 IGS_060 igs rps18|rpl20 rps18-rpl20 72613 72822 0 210 LSC 0.007656 3 2 300 27 no 0.400000 3 0.666667 0.007690 0.990476 34.400000 rpl20 gene rpl20 rpl20 72823 73251 -1 429 LSC 0.006760 6 0 86 11 no 0.400000 3 0.666667 0.006760 1.000000 34.600000 IGS_061 igs rpl20|rps12 rpl20-rps12 73252 73975 0 724 LSC 0.002486 4 0 66 213 no 0.400000 3 0.666667 0.002486 1.000000 39.300000 rps12_part1 gene rps12 rps12 73976 74089 -1 114 LSC 0.000000 0 0 67 99 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_062 igs rps12|clpP rps12-clpP 74090 74251 0 162 LSC 0.004938 2 0 181 59 no 0.200000 2 0.500000 0.004938 1.000000 30.700000 clpP gene clpP clpP 74252 76343 -1 2092 LSC 0.001915 9 5 13 236 no 0.400000 3 0.666667 0.001916 0.998088 33.900000 IGS_063 igs clpP|psbB clpP-psbB 76344 76801 0 458 LSC 0.001747 2 0 300 128 no 0.200000 2 0.500000 0.001747 1.000000 36.700000 psbB gene psbB psbB 76802 78328 1 1527 LSC 0.001703 6 0 97 277 no 0.400000 3 0.666667 0.001703 1.000000 41.000000 IGS_064 igs psbB|psbT psbB-psbT 78329 78516 0 188 LSC 0.000000 0 0 117 89 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 psbT gene psbT psbT 78517 78624 1 108 LSC 0.005556 1 0 300 300 no 0.000000 2 0.000000 0.005556 1.000000 37.400000 IGS_065 igs psbT|psbN psbT-psbN 78625 78683 0 59 LSC 0.000000 0 0 18 300 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 psbN gene psbN psbN 78684 78815 -1 132 LSC 0.000000 0 0 77 300 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 IGS_066 igs psbN|psbH psbN-psbH 78816 78927 0 112 LSC 0.000000 0 0 209 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbH gene psbH psbH 78928 79149 1 222 LSC 0.000000 0 0 300 92 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_067 igs psbH|petB psbH-petB 79150 79341 0 192 LSC 0.002083 1 0 300 193 no 0.200000 2 0.500000 0.002083 1.000000 38.600000 petB gene petB petB 79342 80832 1 1491 LSC 0.003962 13 15 99 55 no 0.600000 4 0.750000 0.003981 0.998659 44.400000 IGS_068 igs petB|petD petB-petD 80833 81751 0 919 LSC 0.004244 9 7 114 170 no 0.400000 3 0.666667 0.004037 1.000000 45.100000 petD gene petD petD 81752 82276 1 525 LSC 0.001524 2 0 33 43 no 0.200000 2 0.500000 0.001524 1.000000 30.800000 IGS_069 igs petD|rpoA petD-rpoA 82277 82473 0 197 LSC 0.009137 4 0 300 17 no 0.400000 3 0.666667 0.009137 1.000000 34.200000 rpoA gene rpoA rpoA 82474 83502 -1 1029 LSC 0.002138 5 0 134 300 no 0.400000 3 0.666667 0.002138 1.000000 44.100000 IGS_070 igs rpoA|rps11 rpoA-rps11 83503 83573 0 71 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps11 gene rps11 rps11 83574 83990 -1 417 LSC 0.002878 3 0 300 98 no 0.400000 3 0.666667 0.002878 1.000000 38.200000 IGS_071 igs rps11|rpl36 rps11-rpl36 83991 84109 0 119 LSC 0.006723 2 0 22 51 no 0.400000 3 0.666667 0.006723 1.000000 33.000000 rpl36 gene rpl36 rpl36 84110 84223 -1 114 LSC 0.003509 1 0 8 300 no 0.200000 2 0.500000 0.003509 1.000000 25.800000 IGS_072 igs rpl36|infA rpl36-infA 84224 84333 0 110 LSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 infA gene infA infA 84334 84567 -1 234 LSC 0.000000 0 0 172 300 no 0.000000 1 0.000000 0.000000 1.000000 31.600000 IGS_073 igs infA|rps8 infA-rps8 84568 84679 0 112 LSC 0.000000 0 0 300 212 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps8 gene rps8 rps8 84680 85078 -1 399 LSC 0.002005 2 0 300 51 no 0.200000 2 0.500000 0.002005 1.000000 29.900000 IGS_074 igs rps8|rpl14 rps8-rpl14 85079 85271 0 193 LSC 0.004145 2 0 177 93 no 0.400000 3 0.666667 0.004145 1.000000 36.400000 rpl14 gene rpl14 rpl14 85272 85640 -1 369 LSC 0.001626 1 0 11 54 no 0.000000 2 0.000000 0.001626 1.000000 22.100000 IGS_075 igs rpl14|rpl16 rpl14-rpl16 85641 85762 0 122 LSC 0.003279 1 0 275 6 no 0.200000 2 0.500000 0.003279 1.000000 25.400000 rpl16 gene rpl16 rpl16 85763 87225 -1 1463 LSC 0.005605 16 6 67 24 no 0.600000 4 0.750000 0.004388 0.996582 42.300000 IGS_076 igs rpl16|rps3 rpl16-rps3 87226 87380 0 155 LSC 0.009032 3 0 51 294 no 0.400000 3 0.666667 0.009032 1.000000 36.600000 rps3 gene rps3 rps3 87381 88037 -1 657 LSC 0.001218 2 0 53 128 no 0.400000 3 0.666667 0.001218 1.000000 37.400000 IGS_077 igs rps3|rpl22 rps3-rpl22 88038 88099 0 62 LSC 0.000000 0 0 248 66 no 0.000000 1 0.000000 0.000000 1.000000 23.700000 rpl22 gene rpl22 rpl22 88100 88489 -1 390 LSC 0.004103 3 0 300 12 no 0.400000 3 0.666667 0.004103 1.000000 31.800000 IGS_078 igs rpl22|rps19 rpl22-rps19 88490 88671 0 182 IRb 0.007692 3 0 31 295 no 0.400000 3 0.666667 0.007692 1.000000 34.100000 rps19 gene rps19 rps19 88672 88950 -1 279 IRb 0.000000 0 0 58 16 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_079 igs rps19|trnH-GTG rps19-trnH-GTG 88951 89114 0 164 IRb 0.016149 6 3 300 103 no 0.400000 3 0.666667 0.016149 0.981707 47.400000 trnH-GTG tRNA trnH-GTG trnH-GTG 89115 89189 1 75 IRb 0.000000 0 0 22 28 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_080 igs trnH-GTG|rpl2 trnH-GTG-rpl2 89190 89232 0 43 IRb 0.009302 1 0 97 9 no 0.200000 2 0.500000 0.009302 1.000000 30.300000 rpl2 gene rpl2 rpl2 89233 90710 -1 1478 IRb 0.000812 3 0 14 300 no 0.200000 2 0.500000 0.000812 1.000000 30.400000 IGS_081 igs rpl2|rpl23 rpl2-rpl23 90711 90734 0 24 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 90735 91016 -1 282 IRb 0.000000 0 0 300 260 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_082 igs rpl23|trnI-CAT rpl23-trnI-CAT 91017 91181 0 165 IRb 0.000000 0 0 300 95 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 trnI-CAT tRNA trnI-CAT trnI-CAT 91182 91255 -1 74 IRb 0.000000 0 0 300 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_083 igs trnI-CAT|ycf2 trnI-CAT-ycf2 91256 91384 0 129 IRb 0.004651 1 0 300 300 no 0.000000 2 0.000000 0.004651 1.000000 36.800000 ycf2 gene ycf2 ycf2 91385 98221 1 6837 IRb 0.000527 8 0 107 175 no 0.600000 4 0.750000 0.000527 1.000000 38.400000 IGS_084 igs ycf2|ycf15 ycf2-ycf15 98222 98335 0 114 IRb 0.000000 0 0 300 61 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 ycf15 gene ycf15 ycf15 98336 98570 1 235 IRb 0.002553 1 9 300 300 no 0.400000 3 0.666667 0.002604 1.000000 47.500000 IGS_085 igs ycf15|trnL-CAA ycf15-trnL-CAA 98571 99240 0 670 IRb 0.000000 0 0 173 300 no 0.000000 1 0.000000 0.000000 1.000000 38.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 99241 99321 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_086 igs trnL-CAA|ndhB trnL-CAA-ndhB 99322 99815 0 494 IRb 0.000000 0 0 300 213 no 0.000000 1 0.000000 0.000000 1.000000 37.800000 ndhB gene ndhB ndhB 99816 102048 -1 2233 IRb 0.000717 4 0 300 300 no 0.600000 4 0.750000 0.000717 1.000000 50.300000 IGS_087 igs ndhB|rps7 ndhB-rps7 102049 102344 0 296 IRb 0.000000 0 0 194 300 no 0.000000 1 0.000000 0.000000 1.000000 33.300000 rps7 gene rps7 rps7 102345 102812 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_088 igs rps7|rps12 rps7-rps12 102813 102870 0 58 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps12_part2 gene rps12 rps12 102871 103679 -1 809 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_089 igs rps12|trnV-GAC rps12-trnV-GAC 103680 105604 0 1925 IRb 0.001143 5 8 300 87 no 0.400000 3 0.666667 0.001144 1.000000 39.500000 trnV-GAC tRNA trnV-GAC trnV-GAC 105605 105676 1 72 IRb 0.000000 0 0 183 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_090 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 105677 105903 0 227 IRb 0.002643 1 0 255 300 no 0.000000 2 0.000000 0.002643 1.000000 35.500000 rrn16S rRNA rrn16S rrn16S 105904 107394 -1 1491 IRb 0.000000 0 0 211 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_091 igs rrn16S|rrn23S rrn16S-rrn23S 107395 109793 0 2399 IRb 0.000333 2 0 300 300 no 0.200000 2 0.500000 0.000333 1.000000 42.100000 rrn23S rRNA rrn23S rrn23S 109794 112615 -1 2822 IRb 0.000283 2 0 300 300 no 0.400000 3 0.666667 0.000283 1.000000 45.000000 IGS_092 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 112616 112713 0 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 112714 112816 -1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_093 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 112817 113044 0 228 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn5S rRNA rrn5S rrn5S 113045 113175 1 131 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_094 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 113176 113428 0 253 IRb 0.000000 0 0 300 136 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 113429 113502 1 74 IRb 0.000000 0 0 300 62 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 IGS_095 igs trnR-ACG|trnN-GTT trnR-ACG-trnN-GTT 113503 114075 0 573 IRb 0.003490 4 0 300 300 no 0.400000 3 0.666667 0.003490 1.000000 49.400000 trnN-GTT tRNA trnN-GTT trnN-GTT 114076 114147 -1 72 IRb 0.000000 0 0 300 246 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_096 igs trnN-GTT|ycf1 trnN-GTT-ycf1 114148 114472 0 325 IRb 0.001231 1 0 300 8 no 0.200000 2 0.500000 0.001231 1.000000 24.600000 ycf1 gene ycf1 ycf1 114473 118414 1 3942 IRb 0.001877 17 8 78 200 no 0.600000 4 0.750000 0.001880 0.997971 39.100000 ndhF gene ndhF ndhF 118369 120579 -1 2211 SSC 0.003166 17 0 11 18 no 0.400000 3 0.666667 0.003166 1.000000 34.200000 IGS_098 igs ndhF|rpl32 ndhF-rpl32 120580 121208 0 629 SSC 0.006400 10 12 78 17 no 0.400000 3 0.666667 0.006427 0.993641 40.700000 rpl32 gene rpl32 rpl32 121209 121382 1 174 SSC 0.005747 2 0 81 9 no 0.400000 3 0.666667 0.005747 1.000000 30.900000 IGS_099 igs rpl32|trnL-TAG rpl32-trnL-TAG 121383 122271 0 889 SSC 0.010321 22 24 27 88 yes 0.400000 3 0.666667 0.010381 0.975253 44.700000 trnL-TAG tRNA trnL-TAG trnL-TAG 122272 122351 1 80 SSC 0.000000 0 0 80 8 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_100 igs trnL-TAG|ccsA trnL-TAG-ccsA 122352 122445 0 94 SSC 0.004255 1 0 160 59 no 0.200000 2 0.500000 0.004255 1.000000 30.200000 ccsA gene ccsA ccsA 122446 123423 1 978 SSC 0.004090 8 0 85 22 no 0.400000 3 0.666667 0.004090 1.000000 37.000000 IGS_101 igs ccsA|ndhD ccsA-ndhD 123424 123709 0 286 SSC 0.013636 9 0 300 300 yes 0.400000 3 0.666667 0.013636 1.000000 51.300000 ndhD gene ndhD ndhD 123710 125215 -1 1506 SSC 0.001062 4 0 16 300 no 0.400000 3 0.666667 0.001062 1.000000 34.500000 IGS_102 igs ndhD|psaC ndhD-psaC 125216 125340 0 125 SSC 0.000000 0 0 53 300 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 psaC gene psaC psaC 125341 125586 -1 246 SSC 0.000000 0 0 178 144 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 IGS_103 igs psaC|ndhE psaC-ndhE 125587 126258 0 672 SSC 0.004934 7 74 300 300 yes 0.600000 4 0.750000 0.004992 0.904762 57.400000 ndhE gene ndhE ndhE 126259 126564 -1 306 SSC 0.000000 0 0 94 103 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_104 igs ndhE|ndhG ndhE-ndhG 126565 126773 0 209 SSC 0.008824 4 6 300 300 yes 0.600000 4 0.750000 0.008848 0.976077 54.000000 ndhG gene ndhG ndhG 126774 127304 -1 531 SSC 0.000000 0 0 30 92 no 0.000000 1 0.000000 0.000000 1.000000 25.800000 IGS_105 igs ndhG|ndhI ndhG-ndhI 127305 127388 0 84 SSC 0.000000 0 0 300 8 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 ndhI gene ndhI ndhI 127389 127931 -1 543 SSC 0.002947 4 0 300 179 no 0.200000 2 0.500000 0.002947 1.000000 43.200000 IGS_106 igs ndhI|ndhA ndhI-ndhA 127932 128024 0 93 SSC 0.000000 0 0 300 86 no 0.000000 1 0.000000 0.000000 1.000000 25.200000 ndhA gene ndhA ndhA 128025 130152 -1 2128 SSC 0.004553 21 9 300 300 yes 1.000000 5 1.000000 0.003915 0.996711 61.100000 IGS_107 igs ndhA|ndhH ndhA-ndhH 130153 130153 0 1 SSC 0.000000 0 0 264 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhH gene ndhH ndhH 130154 131335 -1 1182 SSC 0.001015 3 0 265 102 no 0.200000 2 0.500000 0.001015 1.000000 37.200000 IGS_108 igs ndhH|rps15 ndhH-rps15 131336 131459 0 124 SSC 0.003226 1 0 143 86 no 0.200000 2 0.500000 0.003226 1.000000 31.400000 rps15 gene rps15 rps15 131460 131714 -1 255 SSC 0.003137 2 0 21 10 no 0.200000 2 0.500000 0.003137 1.000000 25.600000 IGS_109 igs rps15|ycf1 rps15-ycf1 131715 133269 0 1555 SSC 0.008968 31 63 120 101 yes 0.600000 4 0.750000 0.008696 0.996785 54.900000 ycf1 gene ycf1 ycf1 133270 136908 -1 3639 IRa 0.003189 27 2 11 300 yes 0.600000 4 0.750000 0.003189 0.999450 35.400000 IGS_110 igs ycf1|trnN-GTT ycf1-trnN-GTT 136909 137941 0 1033 IRa 0.000774 2 0 300 300 no 0.400000 3 0.666667 0.000774 1.000000 48.100000 trnN-GTT tRNA trnN-GTT trnN-GTT 137942 138013 1 72 IRa 0.000000 0 0 246 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_111 igs trnN-GTT|trnR-ACG trnN-GTT-trnR-ACG 138014 138586 0 573 IRa 0.003490 4 0 300 300 no 0.400000 3 0.666667 0.003490 1.000000 49.400000 trnR-ACG tRNA trnR-ACG trnR-ACG 138587 138660 -1 74 IRa 0.000000 0 0 62 300 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 IGS_112 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 138661 138913 0 253 IRa 0.000000 0 0 136 300 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 rrn5S rRNA rrn5S rrn5S 138914 139044 -1 131 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_113 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 139045 139272 0 228 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 139273 139375 1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_114 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 139376 139473 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 139474 142295 1 2822 IRa 0.000283 2 0 300 300 no 0.400000 3 0.666667 0.000283 1.000000 45.000000 IGS_115 igs rrn23S|rrn16S rrn23S-rrn16S 142296 144694 0 2399 IRa 0.000333 2 0 300 300 no 0.200000 2 0.500000 0.000333 1.000000 42.100000 rrn16S rRNA rrn16S rrn16S 144695 146185 1 1491 IRa 0.000000 0 0 300 211 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_116 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 146186 146412 0 227 IRa 0.002643 1 0 300 255 no 0.000000 2 0.000000 0.002643 1.000000 35.500000 trnV-GAC tRNA trnV-GAC trnV-GAC 146413 146484 -1 72 IRa 0.000000 0 0 15 183 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_117 igs trnV-GAC|rps12 trnV-GAC-rps12 146485 148409 0 1925 IRa 0.000935 4 8 87 300 no 0.400000 3 0.666667 0.000936 1.000000 39.300000 rps12_part2 gene rps12 rps12 148410 149218 1 809 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_118 igs rps12|rps7 rps12-rps7 149219 149276 0 58 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 149277 149744 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_119 igs rps7|ndhB rps7-ndhB 149745 150040 0 296 IRa 0.000000 0 0 300 194 no 0.000000 1 0.000000 0.000000 1.000000 33.300000 ndhB gene ndhB ndhB 150041 152273 1 2233 IRa 0.000717 4 0 300 300 no 0.600000 4 0.750000 0.000717 1.000000 50.300000 IGS_120 igs ndhB|trnL-CAA ndhB-trnL-CAA 152274 152767 0 494 IRa 0.000000 0 0 213 300 no 0.000000 1 0.000000 0.000000 1.000000 37.800000 trnL-CAA tRNA trnL-CAA trnL-CAA 152768 152848 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_121 igs trnL-CAA|ycf15 trnL-CAA-ycf15 152849 153519 0 671 IRa 0.000000 0 0 300 172 no 0.000000 1 0.000000 0.000000 1.000000 37.900000 ycf15 gene ycf15 ycf15 153520 153753 -1 234 IRa 0.002564 1 9 300 300 no 0.400000 3 0.666667 0.002615 1.000000 47.500000 IGS_122 igs ycf15|ycf2 ycf15-ycf2 153754 153867 0 114 IRa 0.000000 0 0 61 300 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 ycf2 gene ycf2 ycf2 153868 159081 -1 5214 IRa 0.000690 8 0 175 300 no 0.600000 4 0.750000 0.000690 1.000000 43.600000 IGS_123 igs ycf2|trnI-CAT ycf2-trnI-CAT 159082 160833 0 1752 IRa 0.000342 1 0 206 300 no 0.000000 2 0.000000 0.000342 1.000000 39.700000 trnI-CAT tRNA trnI-CAT trnI-CAT 160834 160907 1 74 IRa 0.000000 0 0 21 300 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_124 igs trnI-CAT|rpl23 trnI-CAT-rpl23 160908 161072 0 165 IRa 0.000000 0 0 95 300 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 rpl23 gene rpl23 rpl23 161073 161354 1 282 IRa 0.000000 0 0 260 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_125 igs rpl23|rpl2 rpl23-rpl2 161355 161378 0 24 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl2 gene rpl2 rpl2 161379 162856 1 1478 IRa 0.000812 3 0 300 14 no 0.200000 2 0.500000 0.000812 1.000000 30.400000 IGS_126 igs rpl2|trnH-GTG rpl2-trnH-GTG 162857 162899 0 43 IRa 0.009302 1 0 9 97 no 0.200000 2 0.500000 0.009302 1.000000 30.300000 trnH-GTG tRNA trnH-GTG trnH-GTG 162900 162974 -1 75 IRa 0.000000 0 0 28 22 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_127 igs trnH-GTG|rps19 trnH-GTG-rps19 162975 163138 0 164 IRa 0.016149 6 3 103 300 no 0.400000 3 0.666667 0.016149 0.981707 47.400000 rps19 gene rps19 rps19 163139 163417 1 279 IRa 0.000000 0 0 16 58 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_128 igs rps19|psbA rps19-psbA 163418 109 0 245 IRa 0.010612 5 0 295 20 no 0.400000 3 0.666667 0.010612 1.000000 35.100000