primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5911 6973 1136-1278 1.000000 80.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5911 6973 1147-1289 1.000000 79.9 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 5911 6973 1140-1282 1.000000 75.7 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA TAAGGCAACGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.7 8.1 0.0 0.818817 5911 6973 1166-1308 1.000000 75.5 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ATCATGTCCTTCAAGTCGCA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.2 58.1 0.0 16.9 0.844354 5911 6973 1148-1290 1.000000 75.3 trnG-UCC_p1 trnG-UCC 1 GGTCCAGTTGTATACAATAATCGC GATGCACTAAGTCTAGAATATATAAT 24 26 41.7 26.9 57.8 52.5 20.7 0.0 15.757631 8492 9217 802-804 1.000000 41.4 trnG-UCC_p2 trnG-UCC 2 GACAAAAGGTCCAGTTGTATACA GATGCACTAAGTCTAGAATATATAAT 23 26 39.1 26.9 56.5 52.5 0.1 0.0 16.060322 8492 9217 809-811 1.000000 41.4 trnG-UCC_p3 trnG-UCC 3 ACAAAAGGTCCAGTTGTATACA GATGCACTAAGTCTAGAATATATAAT 22 26 36.4 26.9 55.3 52.5 0.1 0.0 16.236174 8492 9217 808-810 1.000000 41.4 trnG-UCC_p4 trnG-UCC 4 GTCCAGTTGTATACAATAATCGCA GATGCACTAAGTCTAGAATATATAAT 24 26 37.5 26.9 57.2 52.5 20.7 0.0 16.371409 8492 9217 801-803 1.000000 41.4 trnG-UCC_p5 trnG-UCC 5 GACAAAAGGTCCAGTTGTATACAA GATGCACTAAGTCTAGAATATATAAT 24 26 37.5 26.9 57.1 52.5 14.3 0.0 16.404182 8492 9217 809-811 1.000000 41.4 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGGCGGTAGGAACTAGAATGA TTCAATTGGTCAGAGCACCG 21 20 47.6 50.0 58.0 58.5 0.0 5.4 1.505426 29546 30402 982-991 1.000000 69.9 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGAAAGGCGGTAGGAACTAGA TTCAATTGGTCAGAGCACCG 21 20 47.6 50.0 57.9 58.5 0.0 5.4 1.574673 29546 30402 986-995 1.000000 69.3 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AGTAGAAAGGCGGTAGGAACT TTCAATTGGTCAGAGCACCG 21 20 47.6 50.0 58.2 58.5 0.0 5.4 1.659667 29546 30402 989-998 1.000000 68.7 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGTAGAAAGGCGGTAGGAAC TTCAATTGGTCAGAGCACCG 20 20 50.0 50.0 56.7 58.5 0.0 5.4 1.821422 29546 30402 989-998 1.000000 67.4 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 GTAGAAAGGCGGTAGGAACT TTCAATTGGTCAGAGCACCG 20 20 50.0 50.0 56.7 58.5 0.0 5.4 1.821422 29546 30402 988-997 1.000000 67.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46540 47324 846-850 1.000000 78.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 TAGGAAAAAGCCGGCTATCG CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 33.1 10.2 0.482748 46540 47324 897-901 1.000000 77.2 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46540 47324 878-882 1.000000 77.2 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46540 47324 840-844 1.000000 76.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 46540 47324 878-882 1.000000 76.0 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 AATCGTGAGGGTTCAAGTCC TCTACCAGCTGAGCTATCCC 20 20 50.0 55.0 57.5 58.0 0.0 17.4 0.476915 47911 48253 397-408 1.000000 78.2 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 AATCGTGAGGGTTCAAGTCC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 57.5 58.1 0.0 20.1 0.526305 47911 48253 433-444 1.000000 77.6 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 AATCGTGAGGGTTCAAGTCC GTGCCAGGAACCAGATTTGA 20 20 50.0 50.0 57.5 58.1 0.0 0.0 0.564710 47911 48253 448-459 1.000000 77.2 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 AATCGTGAGGGTTCAAGTCC TCAGTCCTCTGCTCTACCAG 20 20 50.0 55.0 57.5 57.9 0.0 0.0 0.610708 47911 48253 409-420 1.000000 77.0 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 AATCGTGAGGGTTCAAGTCC CATGTGCCAGGAACCAGATT 20 20 50.0 50.0 57.5 58.2 0.0 0.0 0.631042 47911 48253 451-462 1.000000 76.7 accD-psaI_p1 accD-psaI 1 GACAGGATTAACCGAGGCTG TTCCAGGAAATTGTGCACCA 20 20 55.0 45.0 58.1 57.9 0.0 15.7 0.137845 59361 59959 1876-1880 1.000000 80.8 accD-psaI_p2 accD-psaI 2 CTTTCGATCGATCCGGGTAC TTCCAGGAAATTGTGCACCA 20 20 55.0 45.0 58.0 57.9 20.2 15.7 0.126849 59361 59959 1995-1999 1.000000 80.7 accD-psaI_p3 accD-psaI 3 CTTTCGATCGATCCGGGTAC ATTTCATCCATCCAGCGTCC 20 20 55.0 50.0 58.0 58.0 20.2 0.0 0.074807 59361 59959 1592-1592 0.500000 59.4 accD-psaI_p4 accD-psaI 4 GACAGGATTAACCGAGGCTG ATTTCATCCATCCAGCGTCC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.085803 59361 59959 1473-1473 0.500000 59.3 accD-psaI_p5 accD-psaI 5 TCCCGTAGCAGTTGGAGTTA ATTTCATCCATCCAGCGTCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.099641 59361 59959 1422-1422 0.500000 59.2 pafII-cemA_p1 pafII-cemA 1 TTGGCCTATTTCTTGCGTGT GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 58.1 57.9 3.3 0.0 0.202190 60962 61660 806-826 1.000000 79.9 pafII-cemA_p2 pafII-cemA 2 ACAAAAAGCTGCGGAATTGG GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 57.8 57.9 0.0 0.0 0.259844 60962 61660 822-842 1.000000 79.4 pafII-cemA_p3 pafII-cemA 3 GCCATTCCCCTAACTCGTAC GAGAGAGAAAGCCACCAAGG 20 20 55.0 55.0 57.8 57.9 0.0 0.0 0.342322 60962 61660 872-892 1.000000 78.6 pafII-cemA_p4 pafII-cemA 4 TGCGGAATTGGCCTATTTCT GAGAGAGAAAGCCACCAAGG 20 20 45.0 55.0 57.6 57.9 13.8 0.0 0.541849 60962 61660 813-833 1.000000 77.1 pafII-cemA_p5 pafII-cemA 5 TTGGCCTATTTCTTGCGTGT GCCCAGCATTCCACCAATTA 20 20 45.0 50.0 58.1 58.5 3.3 0.0 0.611675 60962 61660 856-876 1.000000 76.5 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 58.2 57.6 5.4 4.1 0.543756 63544 64621 1134-1137 1.000000 77.4 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 58.2 57.6 5.4 4.1 0.543756 63544 64621 1136-1139 1.000000 77.4 petA-psbJ_p3 petA-psbJ 3 AGAAGGTTCAATTGGCCGAA ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.7 57.6 5.4 4.1 0.651337 63544 64621 1133-1136 1.000000 76.6 petA-psbJ_p4 petA-psbJ 4 GGTTCAATTGGCCGAAATGA ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.0 57.6 5.4 4.1 1.393062 63544 64621 1129-1132 1.000000 70.6 petA-psbJ_p5 petA-psbJ 5 GAGAAGGTTCAATTGGCCGA TGGTTCATATTCCGGATTGGG 20 21 50.0 47.6 58.2 57.8 5.4 4.1 1.400956 63544 64621 1142-1145 1.000000 70.5 psbF-psbE_p1 psbF-psbE 1 GAACAGCCAACCATCGTACT AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.099386 65148 65156 116-116 1.000000 79.9 psbF-psbE_p2 psbF-psbE 2 GAACAGCCAACCATCGTACT ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.099386 65148 65156 115-115 1.000000 79.9 psbF-psbE_p3 psbF-psbE 3 GAACAGCCAACCATCGTACT CCGGCAGGGAATTCCATTAA 20 20 50.0 50.0 57.9 57.9 0.0 25.7 0.160661 65148 65156 137-137 1.000000 79.3 psbF-psbE_p4 psbF-psbE 4 AACAGCCAACCATCGTACTG AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 58.2 58.0 0.0 0.0 0.196213 65148 65156 115-115 1.000000 79.1 psbF-psbE_p5 psbF-psbE 5 AACAGCCAACCATCGTACTG ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.2 58.0 0.0 0.0 0.196213 65148 65156 114-114 1.000000 79.1 ycf15-trnL-CAA_p1 ycf15-trnL-CAA 1 TGAACAGCGAACAACCAGTT AAATGGTAGACACGCGAGAC 20 20 45.0 50.0 58.3 58.0 0.0 15.9 0.262598 94202 94602 538-538 1.000000 78.8 ycf15-trnL-CAA_p2 ycf15-trnL-CAA 2 TGAACAGCGAACAACCAGTT TGAAATGGTAGACACGCGAG 20 20 45.0 50.0 58.3 58.0 0.0 15.9 0.263969 94202 94602 540-540 1.000000 78.8 ycf15-trnL-CAA_p3 ycf15-trnL-CAA 3 TGAACAGCGAACAACCAGTT GCCTTGGTGGTGAAATGGTA 20 20 45.0 50.0 58.3 58.1 0.0 0.0 0.336896 94202 94602 550-550 1.000000 78.2 ycf15-trnL-CAA_p4 ycf15-trnL-CAA 4 TGAACAGCGAACAACCAGTT TGGTGAAATGGTAGACACGC 20 20 45.0 50.0 58.3 58.2 0.0 0.0 0.451434 94202 94602 543-543 1.000000 77.3 ycf15-trnL-CAA_p5 ycf15-trnL-CAA 5 TGAACAGCGAACAACCAGTT GAAATGGTAGACACGCGAGA 20 20 45.0 50.0 58.3 57.7 0.0 15.9 0.528137 94202 94602 539-539 1.000000 76.7 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG TCCTTTCAATCAAGCGGGAG 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.116191 109347 110384 1940-1971 1.000000 80.5 ycf1_p2 ycf1 2 CAATTGTGACCTCTCGGGAG TCCTTTCAATCAAGCGGGAG 20 20 55.0 50.0 58.0 57.9 4.9 0.0 0.129596 109347 110384 2276-2307 1.000000 80.3 ycf1_p3 ycf1 3 GCGAGCCCCTTTATTCTGAA TCCTTTCAATCAAGCGGGAG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.152247 109347 110384 2050-2081 1.000000 80.2 ycf1_p4 ycf1 4 AAGCGAGCCCCTTTATTCTG TCCTTTCAATCAAGCGGGAG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.157983 109347 110384 2052-2083 1.000000 80.1 ycf1_p5 ycf1 5 TTGTGACCTCTCGGGAGAAT TCCTTTCAATCAAGCGGGAG 20 20 50.0 50.0 58.1 57.9 15.7 0.0 0.175276 109347 110384 2273-2304 1.000000 79.9 ycf1-ndhF_p1 ycf1-ndhF 1 CAACTTCCGAGATGAAGGGG TCCTTTCAATCAAGCGGGAG 20 20 55.0 50.0 58.0 57.9 5.8 0.0 0.143699 110385 110400 787-818 1.000000 82.1 ycf1-ndhF_p2 ycf1-ndhF 2 AACTTCCGAGATGAAGGGGA TCCTTTCAATCAAGCGGGAG 20 20 50.0 50.0 58.0 57.9 5.8 0.0 0.161239 110385 110400 786-817 1.000000 82.0 ycf1-ndhF_p3 ycf1-ndhF 3 CAACTTCCGAGATGAAGGGG CCTTTCAATCAAGCGGGAGT 20 20 55.0 50.0 58.0 58.2 5.8 0.0 0.203453 110385 110400 786-817 1.000000 81.7 ycf1-ndhF_p4 ycf1-ndhF 4 AACTTCCGAGATGAAGGGGA CCTTTCAATCAAGCGGGAGT 20 20 50.0 50.0 58.0 58.2 5.8 0.0 0.220994 110385 110400 785-816 1.000000 81.5 ycf1-ndhF_p5 ycf1-ndhF 5 AGGGTGGAAAGTGAGGAAGA TCCTTTCAATCAAGCGGGAG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.232264 110385 110400 827-858 1.000000 81.3 ccsA-ndhD_p1 ccsA-ndhD 1 AGTTATGGTTCGTTTATATTAACATCT ACCCGGATTTCGTTCTTTCA 27 20 25.9 45.0 55.3 57.4 5.5 0.7 10.240219 115093 115334 346-346 1.000000 43.7 ccsA-ndhD_p2 ccsA-ndhD 2 AGTTATGGTTCGTTTATATTAACA ACCCGGATTTCGTTCTTTCA 24 20 25.0 45.0 52.3 57.4 5.5 0.7 10.257075 115093 115334 346-346 1.000000 43.7 ccsA-ndhD_p3 ccsA-ndhD 3 ACATAGTTATGGTTCGTTTATATT ACCCGGATTTCGTTCTTTCA 24 20 25.0 45.0 52.1 57.4 4.3 0.7 10.466082 115093 115334 350-350 1.000000 43.7 ccsA-ndhD_p4 ccsA-ndhD 4 AGTTATGGTTCGTTTATATTAACATC ACCCGGATTTCGTTCTTTCA 26 20 26.9 45.0 54.1 57.4 5.5 0.7 10.492324 115093 115334 346-346 1.000000 43.7 ccsA-ndhD_p5 ccsA-ndhD 5 GTTATGGTTCGTTTATATTAACATCT ACCCGGATTTCGTTCTTTCA 26 20 26.9 45.0 54.1 57.4 5.5 0.7 10.492324 115093 115334 345-345 1.000000 43.7 ndhD_p1 ndhD 1 CCATCCGGGGTTCAAATTCA GATACCCTGGGACGGATGTA 20 20 50.0 55.0 58.2 58.0 0.0 22.2 0.159364 115335 116486 1915-1916 1.000000 79.6 ndhD_p2 ndhD 2 CCATCCGGGGTTCAAATTCA AGCTACTTTATCGGCTTGGC 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.199066 115335 116486 1337-1337 1.000000 79.4 ndhD_p3 ndhD 3 GGTGCAAATTCGGCAATTGT GATACCCTGGGACGGATGTA 20 20 45.0 55.0 58.2 58.0 7.4 22.2 0.210858 115335 116486 2150-2151 1.000000 79.4 ndhD_p4 ndhD 4 TGCAAATTCGGCAATTGTGG GATACCCTGGGACGGATGTA 20 20 45.0 55.0 58.2 58.0 7.4 22.2 0.212112 115335 116486 2148-2149 1.000000 79.3 ndhD_p5 ndhD 5 CCATCCGGGGTTCAAATTCA TTCGGGTTTATTTAGGGGCG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.195245 115335 116486 1805-1805 0.500000 58.4 ndhE-ndhG_p1 ndhE-ndhG 1 GACACATAAGGGCTCTAACCA CAATTGCTGTTGCTCGTCAA 21 20 47.6 45.0 57.1 57.6 0.0 0.0 2.310985 117754 117863 233-234 1.000000 62.2 ndhE-ndhG_p2 ndhE-ndhG 2 ACAAGTACATGTTCGAGCATCA CAATTGCTGTTGCTCGTCAA 22 20 40.9 45.0 58.1 57.6 12.2 0.0 2.478886 117754 117863 156-157 1.000000 61.2 ndhE-ndhG_p3 ndhE-ndhG 3 AGTTCAAGACACATAAGGGCTC CAATTGCTGTTGCTCGTCAA 22 20 45.5 45.0 58.1 57.6 0.0 0.0 2.460178 117754 117863 240-241 1.000000 61.0 ndhE-ndhG_p4 ndhE-ndhG 4 GTTCAAGACACATAAGGGCTCT CAATTGCTGTTGCTCGTCAA 22 20 45.5 45.0 58.1 57.6 0.0 0.0 2.460178 117754 117863 239-240 1.000000 61.0 ndhE-ndhG_p5 ndhE-ndhG 5 AGTTCAAGACACATAAGGGCT CAATTGCTGTTGCTCGTCAA 21 20 42.9 45.0 56.9 57.6 0.0 0.0 2.482321 117754 117863 240-241 1.000000 60.8 trnL-CAA-ycf15_p1 trnL-CAA-ycf15 1 AAATGGTAGACACGCGAGAC TGAACAGCGAACAACCAGTT 20 20 50.0 45.0 58.0 58.3 15.9 0.0 0.262598 143675 144075 538-538 1.000000 78.8 trnL-CAA-ycf15_p2 trnL-CAA-ycf15 2 TGAAATGGTAGACACGCGAG TGAACAGCGAACAACCAGTT 20 20 50.0 45.0 58.0 58.3 15.9 0.0 0.263969 143675 144075 540-540 1.000000 78.8 trnL-CAA-ycf15_p3 trnL-CAA-ycf15 3 GCCTTGGTGGTGAAATGGTA TGAACAGCGAACAACCAGTT 20 20 50.0 45.0 58.1 58.3 0.0 0.0 0.336896 143675 144075 550-550 1.000000 78.2 trnL-CAA-ycf15_p4 trnL-CAA-ycf15 4 TGGTGAAATGGTAGACACGC TGAACAGCGAACAACCAGTT 20 20 50.0 45.0 58.2 58.3 0.0 0.0 0.451434 143675 144075 543-543 1.000000 77.3 trnL-CAA-ycf15_p5 trnL-CAA-ycf15 5 GAAATGGTAGACACGCGAGA TGAACAGCGAACAACCAGTT 20 20 50.0 45.0 57.7 58.3 15.9 0.0 0.528137 143675 144075 539-539 1.000000 76.7