primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG GGATCAAGGCAGTGGATTGT 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.263709 246 365 182-191 1.000000 87.9 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG TGGATCAAGGCAGTGGATTG 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.262201 246 365 183-192 1.000000 87.8 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 GATCCACTTGGCTACATCCG GTGGATCAAGGCAGTGGATT 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.263709 246 365 184-193 1.000000 87.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 GATCCACTTGGCTACATCCG GATTGTGAATCCACCATGCG 20 20 55.0 50.0 58.1 57.5 0.0 0.0 0.609144 246 365 168-177 1.000000 85.6 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 CAATCCACTGCCTTGATCCA GATTGTGAATCCACCATGCG 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.613505 246 365 182-191 1.000000 85.1 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.0 58.5 1.4 0.0 0.556109 14741 15921 1269-1294 1.000000 77.1 atpH-atpI_p2 atpH-atpI 2 AGCCAATCCAGCAGCAATAA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 57.9 58.5 0.0 0.0 0.666168 14741 15921 1285-1310 1.000000 76.2 atpH-atpI_p3 atpH-atpI 3 AATAACGGAAGCGGCAGAAA TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.2 58.5 1.4 0.0 0.701648 14741 15921 1270-1295 1.000000 75.9 atpH-atpI_p4 atpH-atpI 4 GCCAATCCAGCAGCAATAAC TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 57.8 58.5 0.0 0.0 0.732109 14741 15921 1284-1309 1.000000 75.7 atpH-atpI_p5 atpH-atpI 5 ATAACGGAAGCGGCAGAAAT CCGCGGCTTATATAGGTGAA 20 20 45.0 50.0 58.0 57.3 1.4 14.7 0.774530 14741 15921 1254-1279 1.000000 75.4 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 29524 30395 935-937 1.000000 82.2 trnC-GCA-petN_p2 trnC-GCA-petN 2 GTATCAATTTGGCGGCATGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 57.9 58.2 14.3 0.0 0.289944 29524 30395 987-989 1.000000 81.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 29524 30395 953-955 1.000000 79.9 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTTCCCCAGTTCAAATCCGG TTAGAGCCCACTTCTTCCCC 20 20 50.0 55.0 58.1 58.7 0.0 0.0 0.795880 29524 30395 998-1000 1.000000 77.4 trnC-GCA-petN_p5 trnC-GCA-petN 5 GTATCAATTTGGCGGCATGG TTAGAGCCCACTTCTTCCCC 20 20 50.0 55.0 57.9 58.7 14.3 0.0 0.852348 29524 30395 1050-1052 1.000000 76.8 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AACTTCCTTTCGCAGTACCC GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.186403 33308 34125 962-1027 1.000000 81.2 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 33308 34125 917-982 1.000000 80.7 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 33308 34125 896-961 1.000000 80.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AACTTCCTTTCGCAGTACCC CCGATGACTTACGCCTTACC 20 20 50.0 55.0 57.8 58.2 0.0 0.0 0.331336 33308 34125 959-1024 1.000000 80.0 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG CCGATGACTTACGCCTTACC 20 20 55.0 55.0 58.3 58.2 0.0 0.0 0.414292 33308 34125 914-979 1.000000 79.5 psaA-ycf3_p1 psaA-ycf3 1 CCAGGTTTAGCCCATTCCTC ATCAAGCCGCTGAGTATTGG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.099551 44052 44864 985-1006 1.000000 81.8 psaA-ycf3_p2 psaA-ycf3 2 CCAGGTTTAGCCCATTCCTC GGAAACAGGCTATAGCGCTT 20 20 55.0 50.0 57.9 58.0 0.0 18.7 0.103666 44052 44864 967-988 1.000000 81.8 psaA-ycf3_p3 psaA-ycf3 3 CCAGGTTTAGCCCATTCCTC TTGGTTGAAGATCACCAGGC 20 20 55.0 50.0 57.9 58.1 0.0 3.2 0.148893 44052 44864 918-939 1.000000 81.6 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT GGAAACAGGCTATAGCGCTT 20 20 50.0 50.0 57.9 58.0 4.1 18.7 0.160416 44052 44864 958-979 1.000000 81.4 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.156301 44052 44864 976-997 1.000000 81.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48726 49488 801-813 1.000000 81.5 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48726 49488 809-821 1.000000 80.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48726 49488 833-845 1.000000 80.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 48726 49488 841-853 1.000000 80.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 48726 49488 815-827 1.000000 79.6 accD_p1 accD 1 ACGACGGTTGTCCTATTTGG CTTAGTCCACACCTGTGCTC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.175004 60576 60725 791-995 1.000000 88.9 accD_p2 accD 2 ACGACGGTTGTCCTATTTGG ACACCTGTGCTCGAATTTCA 20 20 50.0 45.0 57.9 57.7 0.0 0.0 0.343495 60576 60725 783-987 1.000000 87.6 accD_p3 accD 3 GAGCACAGGTGTGGACTAAG ACACCTGTGCTCGAATTTCA 20 20 55.0 45.0 57.9 57.7 12.0 0.0 0.340600 60576 60725 991-1195 1.000000 86.8 accD_p4 accD 4 TGAAATTCGAGCACAGGTGT CTTAGTCCACACCTGTGCTC 20 20 45.0 55.0 57.7 57.9 0.9 0.0 0.340600 60576 60725 1007-1211 1.000000 86.7 accD_p5 accD 5 CGACGGTTGTCCTATTTGGA CTTAGTCCACACCTGTGCTC 20 20 50.0 55.0 57.6 57.9 0.0 0.0 0.459595 60576 60725 790-994 1.000000 86.6 accD-psaI_p1 accD-psaI 1 TCAATCTAGTCGTACCACGT CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 55.7 58.0 0.0 26.9 2.281863 63141 63733 747-767 1.000000 69.9 accD-psaI_p2 accD-psaI 2 TCAATCTAGTCGTACCACGT AAGAAGCCATTGCAATTGCC 20 20 45.0 45.0 55.7 57.9 0.0 26.8 2.358397 63141 63733 753-773 1.000000 69.2 accD-psaI_p3 accD-psaI 3 TCAGTTCCATGGTTTCTTTCCT CCATTGCAATTGCCGGAAAT 22 20 40.9 45.0 57.5 58.0 12.6 26.9 2.480483 63141 63733 695-715 1.000000 68.6 accD-psaI_p4 accD-psaI 4 TTCAATCTAGTCGTACCACGT CCATTGCAATTGCCGGAAAT 21 20 42.9 45.0 56.5 58.0 0.0 26.9 2.505547 63141 63733 748-768 1.000000 68.1 accD-psaI_p5 accD-psaI 5 TCAGTTCCATGGTTTCTTTCCT AAGAAGCCATTGCAATTGCC 22 20 40.9 45.0 57.5 57.9 12.6 26.8 2.557017 63141 63733 701-721 1.000000 67.9 clpP_p1 clpP 1 CTGAACGAGTCGCACATACA TGTTATGGACCTCCCCTGTT 20 20 50.0 50.0 58.0 57.9 13.6 0.0 0.076558 75470 76113 1316-1331 1.000000 81.6 clpP_p2 clpP 2 CTGAACGAGTCGCACATACA ACGAACATACCCTGTCTCCA 20 20 50.0 50.0 58.0 58.1 13.6 0.0 0.089790 75470 76113 1575-1590 1.000000 81.2 clpP_p3 clpP 3 CTGAACGAGTCGCACATACA ATGGACAGAAAGCAGTCGAC 20 20 50.0 50.0 58.0 57.9 13.6 7.7 0.108866 75470 76113 1459-1474 1.000000 81.2 clpP_p4 clpP 4 ATGATCTGAACGAGTCGCAC TGTTATGGACCTCCCCTGTT 20 20 50.0 50.0 58.1 57.9 13.6 0.0 0.139113 75470 76113 1321-1336 1.000000 81.1 clpP_p5 clpP 5 GATCTGAACGAGTCGCACAT TGTTATGGACCTCCCCTGTT 20 20 50.0 50.0 58.1 57.9 13.6 0.0 0.139113 75470 76113 1319-1334 1.000000 81.1 petD_p1 petD 1 CCCTTGAACTCCGCAATCTT TTCCCTAGATACGCACATCG 20 20 50.0 50.0 58.2 56.9 0.0 0.0 1.253439 80641 81896 1376-1382 1.000000 71.3 petD_p2 petD 2 TTCCCTTGAACTCCGCAATC TTCCCTAGATACGCACATCG 20 20 50.0 50.0 58.2 56.9 0.0 0.0 1.258607 80641 81896 1378-1384 1.000000 71.3 petD_p3 petD 3 CCCTTGAACTCCGCAATCTT GCGACTATTCCCTAGATACGC 20 21 50.0 52.4 58.2 57.9 0.0 0.0 1.307636 80641 81896 1383-1389 1.000000 70.9 petD_p4 petD 4 TTCCCTTGAACTCCGCAATC GCGACTATTCCCTAGATACGC 20 21 50.0 52.4 58.2 57.9 0.0 0.0 1.312804 80641 81896 1385-1391 1.000000 70.8 petD_p5 petD 5 TTTCCCTTGAACTCCGCAAT TTCCCTAGATACGCACATCG 20 20 45.0 50.0 57.7 56.9 0.0 0.0 1.366188 80641 81896 1379-1385 1.000000 70.4 rpl14-rpl16_p1 rpl14-rpl16 1 AGCATATCGGCGATTGCTAG AGCAGCATCCAAAATGCCTA 20 20 50.0 45.0 58.0 57.9 35.6 6.4 0.150258 85276 85490 352-363 1.000000 82.4 rpl14-rpl16_p2 rpl14-rpl16 2 AGCATATCGGCGATTGCTAG TAGCAGCATCCAAAATGCCT 20 20 50.0 45.0 58.0 57.9 35.6 6.4 0.150258 85276 85490 353-364 1.000000 82.4 rpl14-rpl16_p3 rpl14-rpl16 3 CATATCGGCGATTGCTAGCT AGCAGCATCCAAAATGCCTA 20 20 50.0 45.0 58.0 57.9 28.9 6.4 0.150258 85276 85490 350-361 1.000000 82.4 rpl14-rpl16_p4 rpl14-rpl16 4 CATATCGGCGATTGCTAGCT TAGCAGCATCCAAAATGCCT 20 20 50.0 45.0 58.0 57.9 28.9 6.4 0.150258 85276 85490 351-362 1.000000 82.4 rpl14-rpl16_p5 rpl14-rpl16 5 GAGCATATCGGCGATTGCTA AGCAGCATCCAAAATGCCTA 20 20 50.0 45.0 58.0 57.9 36.0 6.4 0.152154 85276 85490 353-364 1.000000 82.3 ycf2-trnL-CAA_p1 ycf2-trnL-CAA 1 GGAACAGGAGAAAGATTTCCCA AAATGGTAGACACGCGAGAC 22 20 45.5 50.0 58.0 58.0 12.4 15.9 2.042115 98149 98868 810-823 1.000000 65.5 ycf2-trnL-CAA_p2 ycf2-trnL-CAA 2 TGGAACAGGAGAAAGATTTCCC AAATGGTAGACACGCGAGAC 22 20 45.5 50.0 58.0 58.0 1.7 15.9 2.042115 98149 98868 811-824 1.000000 65.5 ycf2-trnL-CAA_p3 ycf2-trnL-CAA 3 GGAACAGGAGAAAGATTTCCCA TGAAATGGTAGACACGCGAG 22 20 45.5 50.0 58.0 58.0 12.4 15.9 2.043486 98149 98868 812-825 1.000000 65.5 ycf2-trnL-CAA_p4 ycf2-trnL-CAA 4 TGGAACAGGAGAAAGATTTCCC TGAAATGGTAGACACGCGAG 22 20 45.5 50.0 58.0 58.0 1.7 15.9 2.043486 98149 98868 813-826 1.000000 65.5 ycf2-trnL-CAA_p5 ycf2-trnL-CAA 5 GGAACAGGAGAAAGATTTCCCA GCCTTGGTGGTGAAATGGTA 22 20 45.5 50.0 58.0 58.1 12.4 0.0 2.116413 98149 98868 822-835 1.000000 64.9 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CCTCGCAATCACTAGCCAAT AGAAGTTCCGGGAGTTACGA 20 20 50.0 50.0 58.0 58.1 0.0 1.7 0.125818 113216 113958 1437-1439 1.000000 81.8 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 TGTCCCCTCCAGTCAAGAAT AGAAGTTCCGGGAGTTACGA 20 20 50.0 50.0 58.0 58.1 0.0 1.7 0.129652 113216 113958 1462-1464 1.000000 81.7 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CCTTGTTCCTACATGACCCG AGAAGTTCCGGGAGTTACGA 20 20 55.0 50.0 58.0 58.1 0.0 1.7 0.109035 113216 113958 1604-1606 1.000000 81.6 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CCTTGTTCCTACATGACCCG TGGGTTGAGAACGGGAATTG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.119889 113216 113958 1558-1560 1.000000 81.6 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 CCTTGTTCCTACATGACCCG TTGGTCATGGGTTGAGAACG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.133299 113216 113958 1565-1567 1.000000 81.5 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 AGGATTCGAACCTACGACCA GCTTTTTGTTGCTGTCGGAA 20 20 50.0 45.0 58.2 57.8 15.0 0.0 0.358927 114031 115067 1204-1218 1.000000 79.4 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 AGGATTCGAACCTACGACCA AAGGCTTTTTGTTGCTGTCG 20 20 50.0 45.0 58.2 57.8 15.0 0.0 0.364958 114031 115067 1207-1221 1.000000 79.3 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 AGGATTCGAACCTACGACCA CGAAGGCTTTTTGTTGCTGT 20 20 50.0 45.0 58.2 57.8 15.0 0.0 0.364958 114031 115067 1209-1223 1.000000 79.3 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 GGATTCGAACCTACGACCAG GCTTTTTGTTGCTGTCGGAA 20 20 55.0 45.0 57.8 57.8 0.0 0.0 0.407602 114031 115067 1203-1217 1.000000 79.0 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 GGATTCGAACCTACGACCAG AAGGCTTTTTGTTGCTGTCG 20 20 55.0 45.0 57.8 57.8 0.0 0.0 0.413633 114031 115067 1206-1220 1.000000 78.9 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGCGGGCGTATCTCTTTTTA GGAGAGCGGGGACTAATAGT 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.057746 117630 118422 1768-1779 0.666667 66.5 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGCGGGCGTATCTCTTTTTA TGGAGAGCGGGGACTAATAG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.059170 117630 118422 1769-1780 0.666667 66.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGCGGGCGTATCTCTTTTTA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.063799 117630 118422 1233-1244 0.666667 66.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGCGGGCGTATCTCTTTTTA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.065169 117630 118422 1234-1245 0.666667 66.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGCGGGCGTATCTCTTTTTA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.180246 117630 118422 1243-1254 0.666667 65.6 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 AGAAGTTCCGGGAGTTACGA CCTTGTTCCTACATGACCCG 20 20 50.0 55.0 58.1 58.0 1.7 0.0 0.109035 133769 134511 1604-1606 1.000000 84.4 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 ATACGATAGCGGCTAGTCGA CCTTGTTCCTACATGACCCG 20 20 50.0 55.0 57.9 58.0 30.2 0.0 0.114576 133769 134511 2009-2022 1.000000 84.4 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 AGAAGTTCCGGGAGTTACGA CCTCGCAATCACTAGCCAAT 20 20 50.0 50.0 58.1 58.0 1.7 0.0 0.125818 133769 134511 1437-1439 1.000000 84.4 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 TGGGTTGAGAACGGGAATTG CCTTGTTCCTACATGACCCG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.119889 133769 134511 1558-1560 1.000000 84.3 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 AGAAGTTCCGGGAGTTACGA TGTCCCCTCCAGTCAAGAAT 20 20 50.0 50.0 58.1 58.0 1.7 0.0 0.129652 133769 134511 1462-1464 1.000000 84.3 trnL-CAA-ycf2_p1 trnL-CAA-ycf2 1 AAATGGTAGACACGCGAGAC GGAACAGGAGAAAGATTTCCCA 20 22 50.0 45.5 58.0 58.0 15.9 12.4 2.042115 148859 149578 810-823 1.000000 65.5 trnL-CAA-ycf2_p2 trnL-CAA-ycf2 2 AAATGGTAGACACGCGAGAC TGGAACAGGAGAAAGATTTCCC 20 22 50.0 45.5 58.0 58.0 15.9 1.7 2.042115 148859 149578 811-824 1.000000 65.5 trnL-CAA-ycf2_p3 trnL-CAA-ycf2 3 TGAAATGGTAGACACGCGAG GGAACAGGAGAAAGATTTCCCA 20 22 50.0 45.5 58.0 58.0 15.9 12.4 2.043486 148859 149578 812-825 1.000000 65.5 trnL-CAA-ycf2_p4 trnL-CAA-ycf2 4 TGAAATGGTAGACACGCGAG TGGAACAGGAGAAAGATTTCCC 20 22 50.0 45.5 58.0 58.0 15.9 1.7 2.043486 148859 149578 813-826 1.000000 65.5 trnL-CAA-ycf2_p5 trnL-CAA-ycf2 5 GCCTTGGTGGTGAAATGGTA GGAACAGGAGAAAGATTTCCCA 20 22 50.0 45.5 58.1 58.0 0.0 12.4 2.116413 148859 149578 822-835 1.000000 64.9