Hotspot

petN-psbM

LSC · 29197-30134 · 938 bp

Back to Verbascum

Pi 0.00384

MarkerSeek score 61.70

Primer available yes

Label petN-psbM

Feature Metadata

label_name: petN-psbM
feature_type: igs
region: LSC
length_bp: 938
variable_sites: 9
pi: 0.00384
unique_haplotype_count: 5
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 61.70

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
petN-psbM_p1	ACTCGTAGTGTGGGGAAGAA	TGCTACTGCGCTATTCATTCT	50.0	42.9	58.0	57.5	1048-1055 bp	1.0	69.0
petN-psbM_p2	TCGTAGTGTGGGGAAGAAGT	TGCTACTGCGCTATTCATTCT	50.0	42.9	58.0	57.5	1046-1053 bp	1.0	69.0
petN-psbM_p3	CGTAGTGTGGGGAAGAAGTG	TGCTACTGCGCTATTCATTCT	55.0	42.9	57.9	57.5	1045-1052 bp	1.0	68.4
petN-psbM_p4	TAGTAAGTCTCGCTTGGGCT	TGCTACTGCGCTATTCATTCT	50.0	42.9	58.2	57.5	1100-1107 bp	1.0	67.8
petN-psbM_p5	GTAGTGTGGGGAAGAAGTGG	TGCTACTGCGCTATTCATTCT	55.0	42.9	57.5	57.5	1044-1051 bp	1.0	65.2