Hotspot

trnL-UAA-trnM-CAU

LSC · 54485-55554 · 1070 bp

Back to Vallisneria

Pi 0.132
MarkerSeek score 83.00
Primer available yes
Label trnL-UAA-trnM-CAU

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnL-UAA-trnM-CAU_p1 ACCAATTTCGCCATATCCCC AGCGAATTTGAGTAGAGCGG 50.0 50.0 58.0 58.1 1559 bp 0.5 59.4
trnL-UAA-trnM-CAU_p2 ACCAATTTCGCCATATCCCC ACGACCGATGGTTAACAGTG 50.0 50.0 58.0 57.9 1698 bp 0.5 59.4
trnL-UAA-trnM-CAU_p3 ACCAATTTCGCCATATCCCC GCGAATTTGAGTAGAGCGGA 50.0 50.0 58.0 58.1 1558 bp 0.5 59.3
trnL-UAA-trnM-CAU_p4 TCAGGATTGCCCGTTTTTCA AGCGAATTTGAGTAGAGCGG 45.0 50.0 58.0 58.1 1661 bp 0.5 59.3
trnL-UAA-trnM-CAU_p5 TCAGGATTGCCCGTTTTTCA ACGACCGATGGTTAACAGTG 45.0 50.0 58.0 57.9 1800 bp 0.5 59.3