primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rpoB-clpP_p1 rpoB-clpP 1 TAAACCCAGGTATTGCCGAC ATGTCAGCAAAAGAAGCCCA 20 20 50.0 45.0 57.6 58.0 0.0 0.0 0.406948 81046 83782 2832-2957 1.000000 88.7 rpoB-clpP_p2 rpoB-clpP 2 CAGGTATTGCCGACATTCCT ATGTCAGCAAAAGAAGCCCA 20 20 50.0 45.0 57.7 58.0 0.0 0.0 0.332415 81046 83782 2852-2951 0.857143 82.2 rpoB-clpP_p3 rpoB-clpP 3 GTTCTTCCATCAAGCCCTGA ATGTCAGCAAAAGAAGCCCA 20 20 50.0 45.0 57.5 58.0 0.0 0.0 0.497250 81046 83782 2889-2964 0.857143 81.6 rpoB-clpP_p4 rpoB-clpP 4 AGTTCTTCCATCAAGCCCTG ATGTCAGCAAAAGAAGCCCA 20 20 50.0 45.0 57.5 58.0 0.0 0.0 0.504247 81046 83782 2890-2965 0.857143 81.5 rpoB-clpP_p5 rpoB-clpP 5 CAGGTATTGCCGACATTCCT TGTCAGCAAAAGAAGCCCAA 20 20 50.0 45.0 57.7 58.2 0.0 0.0 0.557953 81046 83782 2851-2950 0.857143 80.4 rps16-rrn16_p1 rps16-rrn16 1 TGCTCAACCTACAGAAACGG CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 57.8 57.5 0.0 5.6 0.686654 109644 112452 1601-2980 0.857143 79.3 rps16-rrn16_p2 rps16-rrn16 2 GCTCAACCTACAGAAACGGT CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 57.8 57.5 0.0 5.6 0.688154 109644 112452 1600-2979 0.857143 79.3 rps16-rrn16_p3 rps16-rrn16 3 TGCTCAACCTACAGAAACGG TCCGACTTGCATGTGTCAAG 20 20 50.0 50.0 57.8 58.5 0.0 10.4 0.651968 109644 112452 1645-2979 0.714286 73.8 rps16-rrn16_p4 rps16-rrn16 4 GCTCAACCTACAGAAACGGT TCCGACTTGCATGTGTCAAG 20 20 50.0 50.0 57.8 58.5 0.0 10.4 0.653468 109644 112452 1644-2978 0.714286 73.8 rps16-rrn16_p5 rps16-rrn16 5 TGCTCAACCTACAGAAACGG CACTGGAAACACCACTTCCC 20 20 50.0 55.0 57.8 58.7 0.0 0.0 0.845242 109644 112452 1666-3000 0.714286 72.2 trnI-GAU_p1 trnI-GAU 1 AACTCCAAAAACCCGTCCTC CCTCTACGTTCTTGACAGCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.025275 114244 115261 1829-1840 1.000000 91.8 trnI-GAU_p2 trnI-GAU 2 AACTCCAAAAACCCGTCCTC CTCTACGTTCTTGACAGCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.025275 114244 115261 1828-1839 1.000000 91.8 trnI-GAU_p3 trnI-GAU 3 GACCGGAGTGAAGTCGTAAC CCTCTACGTTCTTGACAGCC 20 20 55.0 55.0 58.0 58.0 9.5 0.0 0.027844 114244 115261 1627-1637 1.000000 91.8 trnI-GAU_p4 trnI-GAU 4 GACCGGAGTGAAGTCGTAAC CTCTACGTTCTTGACAGCCC 20 20 55.0 55.0 58.0 58.0 9.5 0.0 0.027844 114244 115261 1626-1636 1.000000 91.8 trnI-GAU_p5 trnI-GAU 5 TGCCATCGTTGAGTTTGGAA CTCTACGTTCTTGACAGCCC 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.028066 114244 115261 1980-1991 1.000000 91.8 rrn5-trnR-ACG_p1 rrn5-trnR-ACG 1 CCTTGTTCCTACATGACCCG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.026507 119765 120012 1271-1275 1.000000 91.8 rrn5-trnR-ACG_p2 rrn5-trnR-ACG 2 TGTCCCCTCCAGTCAAGAAT CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.047124 119765 120012 1111-1115 1.000000 91.6 rrn5-trnR-ACG_p3 rrn5-trnR-ACG 3 CAGCTGAGGCATCCTAACAG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 58.0 58.0 8.4 0.0 0.051503 119765 120012 1306-1310 1.000000 91.6 rrn5-trnR-ACG_p4 rrn5-trnR-ACG 4 CCTTGTTCCTACATGACCCG TAGCGCATCAAAGATGCAGT 20 20 55.0 45.0 58.0 58.0 0.0 25.9 0.052595 119765 120012 1048-1052 1.000000 91.6 rrn5-trnR-ACG_p5 rrn5-trnR-ACG 5 TGCCTCTCCAAGGGATGTAA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.036917 119765 120012 1149-1151 0.285714 51.3 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CTCGACGCCAGGATGTTAAA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.006913 120087 120599 924-928 1.000000 91.9 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 CTCGACGCCAGGATGTTAAA CAGTACCCTCGTTGACTTCG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.026041 120087 120599 1221-1225 1.000000 91.8 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CCTTGTTCCTACATGACCCG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.026507 120087 120599 1271-1275 1.000000 91.8 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CCTTGTTCCTACATGACCCG CAGTACCCTCGTTGACTTCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.045634 120087 120599 1568-1572 1.000000 91.6 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 TGCCTCTCCAAGGGATGTAA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.036917 120087 120599 1149-1151 0.285714 51.3 trnN-GUU-rps15_p1 trnN-GUU-rps15 1 GGCAGCGAATCGAACAAAAA TACCCGTCTCTGGTTGTCTT 20 20 45.0 50.0 58.0 58.0 6.9 0.0 0.050258 123916 124035 538-1983 0.857143 85.9 trnN-GUU-rps15_p2 trnN-GUU-rps15 2 TATTCGACTGGAATGGCAGC TACCCGTCTCTGGTTGTCTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.051811 123916 124035 552-1997 0.857143 85.9 trnN-GUU-rps15_p3 trnN-GUU-rps15 3 TCGTCCGCTTGACAATACTG TTTTTGTTCGATTCGCTGCC 20 20 50.0 45.0 58.0 58.0 4.4 0.0 0.054089 123916 124035 869-1155 0.571429 74.4 trnN-GUU-rps15_p4 trnN-GUU-rps15 4 TCGTCCGCTTGACAATACTG GAGCGGCCTATTGTAGATCG 20 20 50.0 55.0 58.0 58.0 4.4 0.0 0.025228 123916 124035 357-1789 0.571429 73.7 trnN-GUU-rps15_p5 trnN-GUU-rps15 5 TCGTCCGCTTGACAATACTG AGTCCACCTCCAATCACTGA 20 20 50.0 50.0 58.0 58.0 4.4 0.0 0.039228 123916 124035 179-1611 0.571429 71.1 ndhI-ndhG_p1 ndhI-ndhG 1 AGGCAATGGAATAAAGCATCA AAGACCCAATCCCAGGAAGA 21 20 38.1 50.0 55.9 57.9 0.0 0.0 3.176889 131036 133582 1408-2643 0.714286 49.6 ndhI-ndhG_p2 ndhI-ndhG 2 CGTCTCATCATAAAAGGCAATGG AAGACCCAATCCCAGGAAGA 23 20 43.5 50.0 58.1 57.9 0.0 0.0 3.207618 131036 133582 1422-2657 0.714286 49.3 ndhI-ndhG_p3 ndhI-ndhG 3 GGCAATGGAATAAAGCATCAAGA AAGACCCAATCCCAGGAAGA 23 20 39.1 50.0 57.7 57.9 0.0 0.0 3.326490 131036 133582 1407-2642 0.714286 48.4 ndhI-ndhG_p4 ndhI-ndhG 4 AGGCAATGGAATAAAGCATCAAG AAGACCCAATCCCAGGAAGA 23 20 39.1 50.0 57.7 57.9 0.0 0.0 3.332039 131036 133582 1408-2643 0.714286 48.4 ndhI-ndhG_p5 ndhI-ndhG 5 AGGCAATGGAATAAAGCATCAA AAGACCCAATCCCAGGAAGA 22 20 36.4 50.0 56.6 57.9 0.0 0.0 3.425853 131036 133582 1408-2643 0.714286 47.6 rpl32-ndhF_p1 rpl32-ndhF 1 AGCGTGTCTACCGATTTCAC GGGAATTGCGCAGATTTAGC 20 20 50.0 50.0 58.0 57.9 0.0 11.3 0.133292 138854 140254 1839-2866 0.857143 82.2 rpl32-ndhF_p2 rpl32-ndhF 2 AGCGTGTCTACCGATTTCAC TACGTGAAGAGGGAATTGCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.012413 138854 140254 1849-2876 0.714286 75.0 rpl32-ndhF_p3 rpl32-ndhF 3 CAGCGTGTCTACCGATTTCA TACGTGAAGAGGGAATTGCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.013783 138854 140254 1850-2877 0.714286 75.0 rpl32-ndhF_p4 rpl32-ndhF 4 TCCTAAGAGCAGCGTGTCTA TACGTGAAGAGGGAATTGCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.128860 138854 140254 1859-2886 0.714286 74.1 rpl32-ndhF_p5 rpl32-ndhF 5 AGCTTTTAAGGCTGCCCAAT TACGTGAAGAGGGAATTGCG 20 20 45.0 50.0 58.1 58.0 16.6 0.0 0.061806 138854 140254 2215-2238 0.571429 65.9 ndhG-ndhI_p1 ndhG-ndhI 1 AAGACCCAATCCCAGGAAGA AGGCAATGGAATAAAGCATCA 20 21 50.0 38.1 57.9 55.9 0.0 0.0 3.176889 148563 151109 1408-2643 0.714286 49.6 ndhG-ndhI_p2 ndhG-ndhI 2 AAGACCCAATCCCAGGAAGA CGTCTCATCATAAAAGGCAATGG 20 23 50.0 43.5 57.9 58.1 0.0 0.0 3.207618 148563 151109 1422-2657 0.714286 49.3 ndhG-ndhI_p3 ndhG-ndhI 3 AAGACCCAATCCCAGGAAGA GGCAATGGAATAAAGCATCAAGA 20 23 50.0 39.1 57.9 57.7 0.0 0.0 3.326490 148563 151109 1407-2642 0.714286 48.4 ndhG-ndhI_p4 ndhG-ndhI 4 AAGACCCAATCCCAGGAAGA AGGCAATGGAATAAAGCATCAAG 20 23 50.0 39.1 57.9 57.7 0.0 0.0 3.332039 148563 151109 1408-2643 0.714286 48.4 ndhG-ndhI_p5 ndhG-ndhI 5 AAGACCCAATCCCAGGAAGA AGGCAATGGAATAAAGCATCAA 20 22 50.0 36.4 57.9 56.6 0.0 0.0 3.425853 148563 151109 1408-2643 0.714286 47.6 rps15-trnN-GUU_p1 rps15-trnN-GUU 1 TCCCGCAAAAATTCTGGACA AAGACAACCAGAGACGGGTA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.017077 157034 157153 1760-1871 0.714286 80.4 rps15-trnN-GUU_p2 rps15-trnN-GUU 2 CGACTCGACAAGACAACGAT TCAGTGATTGGAGGTGGACT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.064944 157034 157153 1624-1731 0.571429 73.3 rps15-trnN-GUU_p3 rps15-trnN-GUU 3 ATACAAAGGAGAGCCCCTGT TCAGTGATTGGAGGTGGACT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057439 157034 157153 1396-1412 0.428571 66.4 rps15-trnN-GUU_p4 rps15-trnN-GUU 4 TCCCGCAAAAATTCTGGACA CGATCTACAATAGGCCGCTC 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.027734 157034 157153 1694-1801 0.428571 65.7 rps15-trnN-GUU_p5 rps15-trnN-GUU 5 TCCCGCAAAAATTCTGGACA TCAGTGATTGGAGGTGGACT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.041734 157034 157153 1872-1979 0.428571 65.2 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 CCGTTGTTCCTCAGTAGCTC CTCGACGCCAGGATGTTAAA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.006913 161546 162058 924-928 1.000000 91.9 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 CAGTACCCTCGTTGACTTCG CTCGACGCCAGGATGTTAAA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.026041 161546 162058 1221-1225 1.000000 91.8 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 CAGTACCCTCGTTGACTTCG CCTTGTTCCTACATGACCCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.045634 161546 162058 1568-1572 1.000000 91.6 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 CCGTTGTTCCTCAGTAGCTC CCTTGTTCCTACATGACCCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.026507 161546 162058 1271-1275 1.000000 91.1 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 CCGTTGTTCCTCAGTAGCTC TGCCTCTCCAAGGGATGTAA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.036917 161546 162058 1149-1151 0.285714 51.3 trnR-ACG-rrn5_p1 trnR-ACG-rrn5 1 CCGTTGTTCCTCAGTAGCTC CAGCTGAGGCATCCTAACAG 20 20 55.0 55.0 58.0 58.0 0.0 8.4 0.051503 162133 162380 1306-1310 1.000000 91.4 trnR-ACG-rrn5_p2 trnR-ACG-rrn5 2 CCGTTGTTCCTCAGTAGCTC CCTTGTTCCTACATGACCCG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.026507 162133 162380 1271-1275 1.000000 91.1 trnR-ACG-rrn5_p3 trnR-ACG-rrn5 3 CCGTTGTTCCTCAGTAGCTC TGTCCCCTCCAGTCAAGAAT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.047124 162133 162380 1111-1115 1.000000 91.1 trnR-ACG-rrn5_p4 trnR-ACG-rrn5 4 TAGCGCATCAAAGATGCAGT CCTTGTTCCTACATGACCCG 20 20 45.0 55.0 58.0 58.0 25.9 0.0 0.052595 162133 162380 1048-1052 1.000000 90.9 trnR-ACG-rrn5_p5 trnR-ACG-rrn5 5 CCGTTGTTCCTCAGTAGCTC TGCCTCTCCAAGGGATGTAA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.036917 162133 162380 1149-1151 0.285714 51.3 trnI-GAU_p1 trnI-GAU 1 CCTCTACGTTCTTGACAGCC AACTCCAAAAACCCGTCCTC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.025275 166884 167901 1829-1840 1.000000 91.8 trnI-GAU_p2 trnI-GAU 2 CTCTACGTTCTTGACAGCCC AACTCCAAAAACCCGTCCTC 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.025275 166884 167901 1828-1839 1.000000 91.8 trnI-GAU_p3 trnI-GAU 3 CCTCTACGTTCTTGACAGCC GACCGGAGTGAAGTCGTAAC 20 20 55.0 55.0 58.0 58.0 0.0 9.5 0.027844 166884 167901 1627-1637 1.000000 91.8 trnI-GAU_p4 trnI-GAU 4 CTCTACGTTCTTGACAGCCC GACCGGAGTGAAGTCGTAAC 20 20 55.0 55.0 58.0 58.0 0.0 9.5 0.027844 166884 167901 1626-1636 1.000000 91.8 trnI-GAU_p5 trnI-GAU 5 CTCTACGTTCTTGACAGCCC TGCCATCGTTGAGTTTGGAA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.028066 166884 167901 1980-1991 1.000000 91.8 rrn16-rps16_p1 rrn16-rps16 1 CCAGGATCGAACTCTCCATG TGCTCAACCTACAGAAACGG 20 20 55.0 50.0 57.5 57.8 5.6 0.0 0.686654 169693 172501 1601-2980 0.857143 79.6 rrn16-rps16_p2 rrn16-rps16 2 CCAGGATCGAACTCTCCATG GCTCAACCTACAGAAACGGT 20 20 55.0 50.0 57.5 57.8 5.6 0.0 0.688154 169693 172501 1600-2979 0.857143 79.6 rrn16-rps16_p3 rrn16-rps16 3 TCCGACTTGCATGTGTCAAG TGCTCAACCTACAGAAACGG 20 20 50.0 50.0 58.5 57.8 10.4 0.0 0.651968 169693 172501 1645-2979 0.714286 74.1 rrn16-rps16_p4 rrn16-rps16 4 TCCGACTTGCATGTGTCAAG GCTCAACCTACAGAAACGGT 20 20 50.0 50.0 58.5 57.8 10.4 0.0 0.653468 169693 172501 1644-2978 0.714286 74.1 rrn16-rps16_p5 rrn16-rps16 5 CACTGGAAACACCACTTCCC TGCTCAACCTACAGAAACGG 20 20 55.0 50.0 58.7 57.8 0.0 0.0 0.845242 169693 172501 1666-3000 0.714286 72.5