primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score matK-trnK-UUU_p1 matK-trnK-UUU 1 TTGCAATTCCAAGACTCGCT CGTGATAACGGAACAGGGTT 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.192730 3441 4132 1656-1656 0.040000 40.1 matK-trnK-UUU_p2 matK-trnK-UUU 2 TTGCAATTCCAAGACTCGCT TCGGGTTGCTAACTCAATGG 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.211730 3441 4132 1282-1282 0.040000 39.9 matK-trnK-UUU_p3 matK-trnK-UUU 3 TTGCAATTCCAAGACTCGCT GGAACAGGGTTGCGTCTATT 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.213205 3441 4132 1647-1647 0.040000 39.9 matK-trnK-UUU_p4 matK-trnK-UUU 4 TTGCAATTCCAAGACTCGCT CGGGTTGCTAACTCAATGGT 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.282564 3441 4132 1281-1281 0.040000 39.3 matK-trnK-UUU_p5 matK-trnK-UUU 5 TTGCAATTCCAAGACTCGCT TGATAACGGAACAGGGTTGC 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.287706 3441 4132 1654-1654 0.040000 39.3 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AACGGCAGGCAATAGTTAGG AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.046629 4170 5052 1876-2065 0.640000 77.2 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AACGGCAGGCAATAGTTAGG TCGATCTCGACGAGAAGGAA 20 20 50.0 50.0 58.0 58.0 0.0 29.7 0.058335 4170 5052 1481-1571 0.440000 69.1 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TTACACATAGAACGGCAGGC AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.026784 4170 5052 2019-2076 0.160000 58.2 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TTACACATAGAACGGCAGGC TCGATCTCGACGAGAAGGAA 20 20 50.0 50.0 58.0 58.0 0.0 29.7 0.038490 4170 5052 1535-1561 0.120000 56.5 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TTACACATAGAACGGCAGGC TAGTCAACGTGGATCATGCG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.097298 4170 5052 2081-2081 0.040000 40.8 rps16_p1 rps16 1 AACCCTGTTCCGTTATCACG CTACTGTGTACCGCTGAACC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.096780 5053 6147 1705-1705 0.040000 40.8 rps16_p2 rps16 2 AATAGACGCAACCCTGTTCC CTACTGTGTACCGCTGAACC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.117255 5053 6147 1714-1714 0.040000 40.7 rps16_p3 rps16 3 AACCCTGTTCCGTTATCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.165051 5053 6147 2160-2160 0.040000 40.3 rps16_p4 rps16 4 AACCCTGTTCCGTTATCACG GTACCGCTGAACCAATGACT 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.183712 5053 6147 1698-1698 0.040000 40.1 rps16_p5 rps16 5 AATAGACGCAACCCTGTTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.185526 5053 6147 2169-2169 0.040000 40.1 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 TGGCAGCAACATACCCTTTT CTTACAGCTGCTTGCCAAAC 20 20 45.0 50.0 58.0 57.9 0.0 15.3 0.064337 6148 6661 1382-1891 0.760000 81.9 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TGGCAGCAACATACCCTTTT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.0 58.1 0.0 16.9 0.084343 6148 6661 829-1294 0.720000 80.1 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AGATCCTTGTCCCCGAGAAA CTTACAGCTGCTTGCCAAAC 20 20 50.0 50.0 58.0 57.9 0.0 15.3 0.103473 6148 6661 1200-1688 0.640000 76.8 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AGCATCCTCATTTCGCGATT CTTACAGCTGCTTGCCAAAC 20 20 45.0 50.0 58.0 57.9 10.9 15.3 0.097053 6148 6661 1243-1243 0.040000 40.8 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AGCATCCTCATTTCGCGATT GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.0 58.1 10.9 16.9 0.117059 6148 6661 654-654 0.040000 40.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 7951 8596 622-1175 1.000000 63.7 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.674529 7951 8596 624-1177 1.000000 62.6 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 7951 8596 623-1176 0.960000 62.1 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 7951 8596 626-1179 0.960000 61.0 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CAATCCGACGCTTTAGTCCA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 7951 8596 625-1178 0.960000 61.0 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TTTTCTACTAACGCGAGCCC TTGCAAGCCTTGGTCTTGAT 20 20 50.0 45.0 58.0 58.0 15.9 20.0 0.000781 25935 27085 1976-1976 0.040000 41.6 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 ATACTGGATCCCCACCTACG TTGCAAGCCTTGGTCTTGAT 20 20 55.0 45.0 58.0 58.0 9.9 20.0 0.011474 25935 27085 2166-2166 0.040000 41.5 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CCACCTACGCAAGCAAATTG TTGCAAGCCTTGGTCTTGAT 20 20 50.0 45.0 58.0 58.0 0.0 20.0 0.019098 25935 27085 2155-2155 0.040000 41.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CGAGCCCATATCCTTGCTTT TTGCAAGCCTTGGTCTTGAT 20 20 50.0 45.0 58.0 58.0 0.0 20.0 0.027480 25935 27085 1963-1963 0.040000 41.4 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TCTACTAACGCGAGCCCATA TTGCAAGCCTTGGTCTTGAT 20 20 50.0 45.0 58.0 58.0 15.9 20.0 0.028871 25935 27085 1973-1973 0.040000 41.4 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG TTTACCAAGGGCTAGAGTCA 20 20 55.0 45.0 58.1 55.5 7.6 0.0 2.599644 30412 31747 1206-1578 0.920000 68.0 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA TTTACCAAGGGCTAGAGTCA 20 20 50.0 45.0 58.1 55.5 0.0 0.0 2.621798 30412 31747 1209-1581 0.920000 67.8 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA TTTACCAAGGGCTAGAGTCA 20 20 50.0 45.0 58.3 55.5 0.0 0.0 2.818382 30412 31747 1183-1555 0.920000 66.3 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG TTACCAAGGGCTAGAGTCAT 20 20 55.0 45.0 58.1 55.2 7.6 0.0 2.840364 30412 31747 1205-1577 0.920000 66.1 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA TTACCAAGGGCTAGAGTCAT 20 20 50.0 45.0 58.1 55.2 0.0 0.0 2.862519 30412 31747 1208-1580 0.920000 65.9 atpB-rbcL_p1 atpB-rbcL 1 CTACATCTAGTACCGGGCCA AGAAACGATCTCTCCAACGC 20 20 55.0 50.0 58.0 58.0 6.3 0.0 0.011210 50092 50850 1493-1549 0.400000 67.9 atpB-rbcL_p2 atpB-rbcL 2 CTACATCTAGTACCGGGCCA GTAAGTCCATCGGTCCACAC 20 20 55.0 55.0 58.0 58.0 6.3 0.0 0.014850 50092 50850 1062-1118 0.400000 67.9 atpB-rbcL_p3 atpB-rbcL 3 CTACATCTAGTACCGGGCCA GTACCCGCAGTAGCATTCAA 20 20 55.0 50.0 58.0 58.0 6.3 0.0 0.027421 50092 50850 1575-1631 0.400000 67.8 atpB-rbcL_p4 atpB-rbcL 4 CTACATCTAGTACCGGGCCA AGATCCTCCAGACGTAGAGC 20 20 55.0 55.0 58.0 58.0 6.3 0.0 0.033219 50092 50850 1251-1307 0.400000 67.7 atpB-rbcL_p5 atpB-rbcL 5 CTACATCTAGTACCGGGCCA GAGGACGACCGTACTTGTTC 20 20 55.0 55.0 58.0 58.0 6.3 8.8 0.034392 50092 50850 1364-1364 0.040000 41.3 rbcL-accD_p1 rbcL-accD 1 TTGAATGCTACTGCGGGTAC CCCTACCCTTTCGATTTGCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.141325 52285 52945 1537-1648 0.480000 70.1 rbcL-accD_p2 rbcL-accD 2 AATGCTACTGCGGGTACATG CCCTACCCTTTCGATTTGCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.169224 52285 52945 1534-1645 0.480000 69.8 rbcL-accD_p3 rbcL-accD 3 CGTGGCTTCAGGAGGTATTC CCCTACCCTTTCGATTTGCA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.181458 52285 52945 1127-1183 0.280000 61.7 rbcL-accD_p4 rbcL-accD 4 GGCTTCAGGAGGTATTCACG CCCTACCCTTTCGATTTGCA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.181458 52285 52945 1124-1180 0.280000 61.7 rbcL-accD_p5 rbcL-accD 5 TTGAATGCTACTGCGGGTAC CCCGCCGTCATTACTAGTTC 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.169445 52285 52945 1992-2018 0.160000 56.4 accD_p1 accD 1 TGTCTTTTTCGTTCCGTGGT AAAGAAGCCATCGCAATTGC 20 20 45.0 45.0 58.0 58.0 0.0 20.8 0.027433 52946 54457 2348-2514 0.360000 64.4 accD_p2 accD 2 TGTCTTTTTCGTTCCGTGGT ACATCTGCATTCATCGACCC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.067962 52946 54457 2603-2603 0.040000 41.1 accD_p3 accD 3 TGTCTTTTTCGTTCCGTGGT GCATTCATCGACCCTGATGT 20 20 45.0 50.0 58.0 58.0 0.0 3.9 0.067962 52946 54457 2597-2597 0.040000 41.1 accD_p4 accD 4 TGTCTTTTTCGTTCCGTGGT TGCATTCATCGACCCTGATG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.069335 52946 54457 2598-2598 0.040000 41.0 accD_p5 accD 5 TCCACAATTAAACCCACGGG AAAGAAGCCATCGCAATTGC 20 20 50.0 45.0 58.1 58.0 0.0 20.8 0.088012 52946 54457 2460-2460 0.040000 40.9 rpl20-rps12_p1 rpl20-rps12 1 TGCACGTTTAATCCTGGTCA CTCAACGTCGAGGAACATGT 20 20 45.0 50.0 57.4 57.9 0.0 12.9 0.618592 63406 64207 786-937 0.840000 80.7 rpl20-rps12_p2 rpl20-rps12 2 ATGCACGTTTAATCCTGGTCA CTCAACGTCGAGGAACATGT 21 20 42.9 50.0 57.9 57.9 0.0 12.9 1.132284 63406 64207 787-938 0.840000 76.5 rpl20-rps12_p3 rpl20-rps12 3 TGCACGTTTAATCCTGGTCAT CTCAACGTCGAGGAACATGT 21 20 42.9 50.0 57.9 57.9 0.0 12.9 1.132284 63406 64207 786-937 0.840000 76.5 rpl20-rps12_p4 rpl20-rps12 4 TTGTTCTACGTCTTCGAGCT CTCAACGTCGAGGAACATGT 20 20 45.0 50.0 56.6 57.9 0.0 12.9 1.432972 63406 64207 807-962 0.880000 75.7 rpl20-rps12_p5 rpl20-rps12 5 TGCACGTTTAATCCTGGTCA CAACGTCGAGGAACATGTACT 20 21 45.0 47.6 57.4 58.1 0.0 12.9 1.609890 63406 64207 784-935 0.840000 72.7 petB_p1 petB 1 ACCACCTCGAGTTCCAACTA CTTATGCACAGCACAACACG 20 20 50.0 50.0 58.0 58.0 12.3 0.0 0.050933 69267 70656 2441-2441 0.040000 41.2 petB_p2 petB 2 GGTAAAGTAGCTCCCGGTTG CTTATGCACAGCACAACACG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.065511 69267 70656 2012-2012 0.040000 41.1 petB_p3 petB 3 GTAAAGTAGCTCCCGGTTGG CTTATGCACAGCACAACACG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.065511 69267 70656 2011-2011 0.040000 41.1 petB_p4 petB 4 AAGGTTGCCCAAAAGCAGTA CTTATGCACAGCACAACACG 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.126217 69267 70656 2303-2303 0.040000 40.6 petB_p5 petB 5 ACCACCTCGAGTTCCAACTA AGATCTTACGGAGCCCACTT 20 20 50.0 50.0 58.0 58.1 12.3 0.0 0.138007 69267 70656 2458-2458 0.040000 40.5 rpoA_p1 rpoA 1 TTGGTTGGGTATTGGTGCAA GAACTGGTTCGCGTAGGAAT 20 20 45.0 50.0 57.9 58.0 0.0 5.8 0.094075 72272 73339 1673-1713 0.760000 80.0 rpoA_p2 rpoA 2 TTTGGTTGGGTATTGGTGCA GAACTGGTTCGCGTAGGAAT 20 20 45.0 50.0 57.9 58.0 0.0 5.8 0.094075 72272 73339 1674-1714 0.760000 80.0 rpoA_p3 rpoA 3 TTTCATGTCCGGTTCCTTGG GAACTGGTTCGCGTAGGAAT 20 20 50.0 50.0 58.1 58.0 0.0 5.8 0.101684 72272 73339 2141-2181 0.680000 76.2 rpoA_p4 rpoA 4 TTCAATGATAGGCGAACCGG GAACTGGTTCGCGTAGGAAT 20 20 50.0 50.0 58.1 58.0 0.0 5.8 0.057866 72272 73339 1953-1953 0.040000 41.1 rpoA_p5 rpoA 5 TTCAATGATAGGCGAACCGG TTGTCCGAGATGTAACCCCT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.104911 72272 73339 1620-1620 0.040000 40.8 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CTTTCAACGGGGAGTTCCAA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.148618 102120 102623 609-609 0.040000 40.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TCAACGGGGAGTTCCAAAAG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.148618 102120 102623 606-606 0.040000 40.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 CTTTCAACGGGGAGTTCCAA CGATCCACATAACAGTCCCG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.171399 102120 102623 1193-1193 0.040000 40.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TCAACGGGGAGTTCCAAAAG CGATCCACATAACAGTCCCG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.171399 102120 102623 1190-1190 0.040000 40.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TCAACGGGGAGTTCCAAAAG AAGCCCTGGGTAGAAATTGC 20 20 50.0 50.0 58.0 58.1 0.0 15.6 0.171708 102120 102623 1063-1063 0.040000 40.2 ccsA_p1 ccsA 1 GCTACCCCAAACCTCCAAAA TGATACCCTGGGATGGTTGT 20 20 50.0 50.0 58.0 58.0 0.0 22.2 0.024128 102785 103753 1975-1975 0.040000 41.4 ccsA_p2 ccsA 2 CTTTCAACGGGGAGTTCCAA TGATACCCTGGGATGGTTGT 20 20 50.0 50.0 58.0 58.0 0.0 22.2 0.044531 102785 103753 2080-2080 0.040000 41.2 ccsA_p3 ccsA 3 TCAACGGGGAGTTCCAAAAG TGATACCCTGGGATGGTTGT 20 20 50.0 50.0 58.0 58.0 0.0 22.2 0.044531 102785 103753 2077-2077 0.040000 41.2 ccsA_p4 ccsA 4 GCTACCCCAAACCTCCAAAA AGATGTGAATCCGCATGTCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.044895 102785 103753 1901-1901 0.040000 41.2 ccsA_p5 ccsA 5 TCAACGGGGAGTTCCAAAAG AGATGTGAATCCGCATGTCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.065299 102785 103753 2003-2003 0.040000 41.1 rps15-ycf1_p1 rps15-ycf1 1 CGTTTGCAGCCAAAACTTCA GGGAATGGTGCTTTGACTCA 20 20 45.0 50.0 58.1 58.1 6.7 0.0 0.170382 105484 105789 1530-1530 0.040000 40.2 rps15-ycf1_p2 rps15-ycf1 2 GTCAATCCATGCCTCTGTGT GGGAATGGTGCTTTGACTCA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.210102 105484 105789 1565-1565 0.040000 39.9 rps15-ycf1_p3 rps15-ycf1 3 CGTTTGCAGCCAAAACTTCA CTTTTTCAATTGCGCGGGAA 20 20 45.0 45.0 58.1 58.2 6.7 8.8 0.302981 105484 105789 1545-1545 0.040000 39.2 rps15-ycf1_p4 rps15-ycf1 4 GTCAATCCATGCCTCTGTGT CTTTTTCAATTGCGCGGGAA 20 20 50.0 45.0 57.9 58.2 0.0 8.8 0.342700 105484 105789 1580-1580 0.040000 38.9 rps15-ycf1_p5 rps15-ycf1 5 TTTCTTCAATCCGTGGCAGT GGGAATGGTGCTTTGACTCA 20 20 45.0 50.0 57.7 58.1 0.0 0.0 0.360652 105484 105789 1392-1392 0.040000 38.7 ycf1_p1 ycf1 1 TCGATTCCAGCGTTTCGAAT TTAGGCAAAATACCCTCGCC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.051584 109886 110005 330-330 0.040000 41.2 ycf1_p2 ycf1 2 CACCACTTTCGGATATGGCA TTAGGCAAAATACCCTCGCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.083959 109886 110005 418-418 0.040000 40.9 ycf1_p3 ycf1 3 TTTCAGTTCTGGGAGCCCTA TTAGGCAAAATACCCTCGCC 20 20 50.0 50.0 58.0 58.0 7.2 0.0 0.085865 109886 110005 382-382 0.040000 40.9 ycf1_p4 ycf1 4 AAAGGTCGATTCCAGCGTTT TTAGGCAAAATACCCTCGCC 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.154792 109886 110005 335-335 0.040000 40.4 ycf1_p5 ycf1 5 CGATGTATCGCAAAGGTCGA TTAGGCAAAATACCCTCGCC 20 20 50.0 50.0 58.2 58.0 0.9 0.0 0.211881 109886 110005 346-346 0.040000 39.9