feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rpl32 gene rpl32 rpl32 798 971 1 174 SSC 0.002527 16 174 60 26 no 0.053571 18 0.500000 0.002529 1.000000 40.000000 IGS_001 igs rpl32|trnL-UAG rpl32-trnL-UAG 972 1725 0 754 SSC 0.018637 168 754 234 165 yes 0.541667 110 0.827273 0.018529 1.000000 74.000000 trnL-UAG tRNA trnL-UAG trnL-UAG 1726 1805 1 80 SSC 0.000453 2 80 123 85 no 0.005952 4 0.250000 0.000453 1.000000 34.300000 IGS_002 igs trnL-UAG|ccsA trnL-UAG-ccsA 1806 1880 0 75 SSC 0.003620 6 75 203 10 no 0.023810 11 0.363636 0.003609 1.000000 37.300000 ccsA gene ccsA ccsA 1881 2834 1 954 SSC 0.005646 71 954 278 43 yes 0.321429 71 0.760563 0.005641 1.000000 51.800000 IGS_003 igs ccsA|ndhD ccsA-ndhD 2835 3099 0 265 SSC 0.038637 55 265 57 300 yes 0.267857 61 0.737705 0.038553 1.000000 63.600000 ndhD gene ndhD ndhD 3100 4620 -1 1521 SSC 0.004014 120 1521 141 10 no 0.375000 80 0.787500 0.004014 1.000000 50.100000 IGS_004 igs ndhD|psaC ndhD-psaC 4621 4725 0 105 SSC 0.014419 16 105 8 258 no 0.071429 23 0.521739 0.014421 1.000000 45.400000 psaC gene psaC psaC 4726 4971 -1 246 SSC 0.001773 12 246 3 12 no 0.041667 15 0.466667 0.001773 1.000000 32.300000 IGS_005 igs psaC|ndhE psaC-ndhE 4972 5358 0 387 SSC 0.011993 64 387 249 54 no 0.333333 79 0.708861 0.010998 1.000000 53.900000 ndhE gene ndhE ndhE 5359 5664 -1 306 SSC 0.004705 20 306 90 27 no 0.071429 24 0.500000 0.004705 1.000000 38.200000 IGS_006 igs ndhE|ndhG ndhE-ndhG 5665 5864 0 200 SSC 0.013189 33 200 23 66 no 0.154762 40 0.650000 0.013227 1.000000 47.500000 ndhG gene ndhG ndhG 5865 6395 -1 531 SSC 0.007431 46 531 21 121 no 0.160714 43 0.627907 0.007431 1.000000 48.000000 IGS_007 igs ndhG|ndhI ndhG-ndhI 6396 6783 0 388 SSC 0.008115 59 388 4 84 no 0.333333 73 0.767123 0.008072 0.997423 48.800000 ndhI gene ndhI ndhI 6784 7326 -1 543 SSC 0.004236 35 543 115 76 no 0.083333 33 0.424242 0.004236 1.000000 46.700000 IGS_008 igs ndhI|ndhA ndhI-ndhA 7327 7414 0 88 SSC 0.006329 9 88 26 11 no 0.035714 13 0.461538 0.006329 1.000000 41.300000 ndhA gene ndhA ndhA 7415 9560 -1 2146 SSC 0.005388 215 2146 11 112 no 0.547619 108 0.851852 0.005392 1.000000 55.400000 IGS_009 igs ndhA|ndhH ndhA-ndhH 9561 9561 0 1 SSC 0.000000 0 1 43 111 no 0.000000 2 0.000000 NA 1.000000 27.700000 ndhH gene ndhH ndhH 9562 10743 -1 1182 SSC 0.002627 85 1182 44 58 no 0.273810 67 0.686567 0.002627 1.000000 49.300000 IGS_010 igs ndhH|rps15 ndhH-rps15 10744 10839 0 96 SSC 0.018302 14 96 171 120 no 0.059524 27 0.370370 0.018303 1.000000 55.300000 rps15 gene rps15 rps15 10840 11112 -1 273 SSC 0.006096 25 273 30 70 no 0.119048 34 0.588235 0.006096 1.000000 43.100000 IGS_011 igs rps15|ycf1 rps15-ycf1 11113 11514 0 402 SSC 0.012533 72 402 56 207 no 0.494048 109 0.761468 0.012533 0.987562 57.600000 ycf1 gene ycf1 ycf1 11515 17040 -1 5526 SSC 0.007496 670 5526 120 300 yes 0.720238 138 0.876812 0.007429 0.998733 62.700000 IGS_012 igs ycf1|trnN-GUU ycf1-trnN-GUU 17041 17356 0 316 IRb 0.000928 14 316 8 300 no 0.023810 7 0.571429 0.000929 1.000000 31.800000 trnN-GUU tRNA trnN-GUU trnN-GUU 17357 17428 1 72 IRb 0.000000 0 72 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 IGS_013 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 17429 18027 0 599 IRb 0.000984 26 599 300 300 no 0.089286 27 0.555556 0.001056 0.969950 51.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 18028 18101 -1 74 IRb 0.000000 0 74 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 IGS_014 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 18102 18356 0 255 IRb 0.000661 8 255 300 300 no 0.047619 12 0.666667 0.000659 1.000000 44.500000 rrn5S rRNA rrn5S rrn5S 18357 18477 -1 121 IRb 0.000200 2 121 300 300 no 0.011905 4 0.500000 0.000200 1.000000 41.800000 IGS_015 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 18478 18701 0 224 IRb 0.000721 4 224 300 300 no 0.017857 6 0.500000 0.000721 1.000000 42.300000 rrn4.5S rRNA rrn4.5S rrn4.5S 18702 18804 -1 103 IRb 0.000118 1 103 300 300 no 0.005952 3 0.333333 0.000118 1.000000 40.800000 IGS_016 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 18805 18902 0 98 IRb 0.000000 0 98 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 rrn23S rRNA rrn23S rrn23S 18903 21712 -1 2810 IRb 0.000126 12 2810 300 300 no 0.035714 14 0.428571 0.000126 1.000000 44.200000 IGS_017 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 21713 21858 0 146 IRb 0.002492 5 146 300 265 no 0.011905 7 0.285714 0.002492 1.000000 45.100000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 21859 21893 -1 35 IRb 0.000000 0 35 300 230 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 22695 22732 -1 38 IRb 0.000000 0 38 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 IGS_020 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 22733 22796 0 64 IRb 0.000189 1 64 300 300 no 0.005952 3 0.333333 0.000189 1.000000 41.600000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 22797 22831 -1 35 IRb 0.000000 0 35 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 ycf68 gene ycf68 ycf68 23294 23669 -1 376 IRb 0.000286 5 376 300 227 no 0.023810 7 0.571429 0.000286 1.000000 43.300000 IGS_023 igs ycf68|trnI-GAU ycf68-trnI-GAU 23670 23768 0 99 IRb 0.000000 0 99 300 128 no 0.000000 2 0.000000 0.000000 1.000000 34.000000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 23769 23810 -1 42 IRb 0.000000 0 42 300 86 no 0.000000 2 0.000000 0.000000 1.000000 30.900000 IGS_024 igs trnI-GAU|rrn16S trnI-GAU-rrn16S 23811 24126 0 316 IRb 0.018879 18 316 300 300 no 0.029762 11 0.454545 0.018900 1.000000 55.900000 rrn16S rRNA rrn16S rrn16S 24127 25617 -1 1491 IRb 0.000157 6 1491 212 49 no 0.017857 8 0.375000 0.000157 1.000000 35.300000 IGS_025 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 25618 25848 0 231 IRb 0.002254 3 231 300 300 no 0.011905 6 0.333333 0.002258 1.000000 42.300000 trnV-GAC tRNA trnV-GAC trnV-GAC 25849 25920 -1 72 IRb 0.000000 0 72 181 300 no 0.000000 2 0.000000 0.000000 1.000000 38.000000 IGS_026 igs trnV-GAC|rps12 trnV-GAC-rps12 25921 27622 0 1702 IRb 0.001037 39 1702 253 300 no 0.172619 42 0.690476 0.001045 0.999412 51.800000 rps12_part2 gene rps12 rps12 27623 28421 1 799 IRb 0.000276 6 799 153 300 no 0.017857 8 0.375000 0.000276 1.000000 43.600000 IGS_027 igs rps12|rps7 rps12-rps7 28422 28479 0 58 IRb 0.000627 3 58 300 300 no 0.017857 5 0.600000 0.000627 1.000000 46.500000 rps7 gene rps7 rps7 28480 28947 1 468 IRb 0.000026 1 468 300 300 no 0.005952 3 0.333333 0.000026 1.000000 43.300000 IGS_028 igs rps7|ndhB rps7-ndhB 28948 29216 0 269 IRb 0.000359 6 269 300 300 no 0.029762 8 0.625000 0.000359 1.000000 42.900000 ndhB gene ndhB ndhB 29217 31449 1 2233 IRb 0.000571 20 2233 300 300 no 0.059524 20 0.500000 0.000571 1.000000 46.700000 IGS_029 igs ndhB|trnL-CAA ndhB-trnL-CAA 31450 31997 0 548 IRb 0.000132 5 548 300 300 no 0.023810 7 0.571429 0.000132 1.000000 46.300000 trnL-CAA tRNA trnL-CAA trnL-CAA 31998 32078 1 81 IRb 0.000000 0 81 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 IGS_030 igs trnL-CAA|ycf15 trnL-CAA-ycf15 32079 32805 0 727 IRb 0.000651 16 727 300 239 no 0.047619 18 0.444444 0.000657 1.000000 49.400000 ycf15 gene ycf15 ycf15 32806 33038 1 233 IRb 0.000510 3 233 300 6 no 0.011905 6 0.333333 0.000510 1.000000 27.000000 IGS_031 igs ycf15|ycf2 ycf15-ycf2 33039 33106 0 68 IRb 0.013445 2 68 300 234 no 0.000000 5 0.000000 0.013445 1.000000 49.200000 ycf2 gene ycf2 ycf2 33107 39997 -1 6891 IRb 0.000824 130 6891 25 29 no 0.404762 87 0.781609 0.000816 0.993034 36.200000 IGS_032 igs ycf2|trnI-CAU ycf2-trnI-CAU 39998 40065 0 68 IRb 0.005048 3 68 300 110 no 0.011905 6 0.333333 0.005070 1.000000 40.700000 trnI-CAU tRNA trnI-CAU trnI-CAU 40066 40139 1 74 IRb 0.000000 0 74 38 36 no 0.000000 2 0.000000 0.000000 1.000000 27.100000 IGS_033 igs trnI-CAU|rpl23 trnI-CAU-rpl23 40140 40304 0 165 IRb 0.002599 5 165 112 300 no 0.017857 7 0.428571 0.002599 1.000000 38.100000 rpl23 gene rpl23 rpl23 40305 40586 1 282 IRb 0.000171 3 282 128 300 no 0.011905 6 0.333333 0.000172 1.000000 35.700000 IGS_034 igs rpl23|rpl2 rpl23-rpl2 40587 40610 0 24 IRb 0.000000 0 24 300 300 no 0.000000 2 0.000000 0.000000 1.000000 39.400000 rpl2 gene rpl2 rpl2 40611 42095 1 1485 IRb 0.000190 13 1485 300 14 no 0.053571 13 0.692308 0.000190 1.000000 33.900000 IGS_035 igs rpl2|trnH-GUG rpl2-trnH-GUG 42096 42138 0 43 IRb 0.014926 5 43 300 260 no 0.041667 13 0.538462 0.014926 1.000000 59.400000 trnH-GUG tRNA trnH-GUG trnH-GUG 42139 42213 -1 75 IRb 0.000000 0 75 28 185 no 0.000000 2 0.000000 0.000000 1.000000 26.500000 IGS_036 igs trnH-GUG|rps19 trnH-GUG-rps19 42214 42352 0 139 IRb 0.000175 2 139 103 46 no 0.017857 10 0.300000 0.000175 1.000000 30.000000 rps19 gene rps19 rps19 42353 42631 1 279 IRb 0.002539 7 279 242 26 no 0.017857 8 0.375000 0.002539 1.000000 30.600000 IGS_037 igs rps19|psbA rps19-psbA 42632 42770 0 139 LSC 0.021851 25 139 232 147 no 0.273810 67 0.686567 0.022789 0.978417 61.200000 psbA gene psbA psbA 42771 43832 -1 1062 LSC 0.002008 53 0 49 138 no 0.196429 49 0.673469 0.002008 1.000000 39.500000 IGS_038 igs psbA|trnK-UUU psbA-trnK-UUU 43833 44067 0 235 LSC 0.017033 30 59 300 65 no 0.363095 95 0.642105 0.012788 0.995745 56.400000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 44068 44102 -1 35 LSC 0.002340 3 0 2 30 no 0.011905 4 0.500000 0.002340 1.000000 30.900000 matK gene matK matK 44361 45896 -1 1536 LSC 0.008787 183 0 33 55 no 0.488095 102 0.803922 0.008787 1.000000 53.000000 IGS_041 igs matK|trnK-UUU matK-trnK-UUU 45897 46740 0 844 LSC 0.012956 122 173 113 59 no 0.488095 102 0.803922 0.010134 0.992891 62.300000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 46741 46777 -1 37 LSC 0.000322 1 0 38 22 no 0.005952 2 0.500000 0.000322 1.000000 24.000000 IGS_042 igs trnK-UUU|rps16 trnK-UUU-rps16 46778 47470 0 693 LSC 0.012148 113 303 75 134 yes 0.470238 97 0.814433 0.012190 0.998557 63.500000 rps16 gene rps16 rps16 47471 48551 -1 1081 LSC 0.006621 97 21 136 98 no 0.404762 89 0.764045 0.006626 0.999075 56.500000 IGS_043 igs rps16|trnQ-UUG rps16-trnQ-UUG 48552 48922 0 371 LSC 0.008108 55 10 61 76 no 0.220238 56 0.660714 0.008111 1.000000 48.400000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 48923 48994 -1 72 LSC 0.000972 2 0 53 4 no 0.005952 3 0.333333 0.000972 1.000000 23.100000 IGS_044 igs trnQ-UUG|psbK trnQ-UUG-psbK 48995 49338 0 344 LSC 0.006415 43 6 125 23 no 0.166667 43 0.651163 0.006416 1.000000 42.100000 psbK gene psbK psbK 49339 49524 1 186 LSC 0.011380 19 0 300 34 no 0.113095 33 0.575758 0.011380 1.000000 41.000000 IGS_045 igs psbK|psbI psbK-psbI 49525 49912 0 388 LSC 0.014354 66 40 17 118 no 0.464286 100 0.780000 0.014525 0.994845 55.400000 psbI gene psbI psbI 49913 50023 1 111 LSC 0.001061 5 0 67 7 no 0.017857 6 0.500000 0.001061 1.000000 25.700000 IGS_046 igs psbI|trnS-GCU psbI-trnS-GCU 50024 50155 0 132 LSC 0.014741 27 41 178 38 no 0.178571 43 0.697674 0.016159 1.000000 49.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 50156 50243 -1 88 LSC 0.005208 3 0 103 12 no 0.011905 4 0.500000 0.005208 1.000000 26.500000 IGS_047 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 50244 51438 0 1195 LSC 0.015377 263 979 49 112 yes 0.696429 133 0.879699 0.014148 0.982427 65.000000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 51439 51461 1 23 LSC 0.000000 0 0 26 89 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 52153 52200 1 48 LSC 0.000000 0 0 300 274 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_050 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 52201 52338 0 138 LSC 0.006685 20 11 300 136 no 0.083333 26 0.538462 0.006664 1.000000 52.200000 trnR-UCU tRNA trnR-UCU trnR-UCU 52339 52410 1 72 LSC 0.000494 2 0 300 64 no 0.005952 3 0.333333 0.000494 1.000000 27.400000 IGS_051 igs trnR-UCU|atpA trnR-UCU-atpA 52411 52523 0 113 LSC 0.006773 12 39 300 300 no 0.053571 17 0.529412 0.006716 1.000000 56.500000 atpA gene atpA atpA 52524 54047 -1 1524 LSC 0.002384 82 0 39 23 no 0.285714 68 0.705882 0.002384 1.000000 39.800000 IGS_052 igs atpA|atpF atpA-atpF 54048 54126 0 79 LSC 0.010990 9 12 64 300 no 0.047619 15 0.533333 0.011019 1.000000 48.100000 atpF gene atpF atpF 54127 55513 -1 1387 LSC 0.007745 141 119 45 38 no 0.559524 115 0.817391 0.007347 1.000000 60.500000 IGS_053 igs atpF|atpH atpF-atpH 55514 55952 0 439 LSC 0.009977 79 279 59 27 no 0.309524 73 0.712329 0.010009 1.000000 52.600000 atpH gene atpH atpH 55953 56198 -1 246 LSC 0.002203 12 0 5 12 no 0.041667 14 0.500000 0.002203 1.000000 27.000000 IGS_054 igs atpH|atpI atpH-atpI 56199 57199 0 1001 LSC 0.009813 171 620 218 24 no 0.738095 142 0.873239 0.009077 0.990010 62.800000 atpI gene atpI atpI 57200 57943 -1 744 LSC 0.002787 46 0 9 157 no 0.148810 40 0.625000 0.002787 1.000000 37.400000 IGS_055 igs atpI|rps2 atpI-rps2 57944 58204 0 261 LSC 0.011698 39 71 287 300 no 0.333333 76 0.736842 0.009749 1.000000 63.500000 rps2 gene rps2 rps2 58205 58915 -1 711 LSC 0.001441 40 5 86 72 no 0.154762 37 0.702703 0.001442 1.000000 41.900000 IGS_056 igs rps2|rpoC2 rps2-rpoC2 58916 59137 0 222 LSC 0.015424 38 1 300 300 no 0.148810 44 0.568182 0.015422 1.000000 56.500000 rpoC2 gene rpoC2 rpoC2 59138 63292 -1 4155 LSC 0.003656 303 24 6 160 no 0.547619 114 0.807018 0.003659 0.999278 42.200000 IGS_057 igs rpoC2|rpoC1 rpoC2-rpoC1 63293 63472 0 180 LSC 0.005829 22 22 15 300 no 0.136905 34 0.676471 0.005872 1.000000 43.700000 rpoC1 gene rpoC1 rpoC1 63473 66239 -1 2767 LSC 0.003288 191 61 19 171 no 0.547619 111 0.828829 0.003274 0.998193 46.800000 IGS_058 igs rpoC1|rpoB rpoC1-rpoB 66240 66265 0 26 LSC 0.001368 2 0 260 145 no 0.005952 3 0.333333 0.001368 1.000000 40.000000 rpoB gene rpoB rpoB 66266 69484 -1 3219 LSC 0.002304 163 0 286 63 no 0.398810 88 0.761364 0.002304 1.000000 41.100000 IGS_059 igs rpoB|trnC-GCA rpoB-trnC-GCA 69485 70863 0 1379 LSC 0.009285 178 488 300 15 no 0.577381 118 0.822034 0.008905 0.991298 59.100000 trnC-GCA tRNA trnC-GCA trnC-GCA 70864 70934 1 71 LSC 0.007041 5 0 32 88 no 0.005952 6 0.166667 0.007041 1.000000 33.200000 IGS_060 igs trnC-GCA|petN trnC-GCA-petN 70935 71962 0 1028 LSC 0.017489 234 494 55 166 yes 0.696429 134 0.873134 0.017356 0.999027 68.500000 petN gene petN petN 71963 72052 1 90 LSC 0.000528 3 0 188 76 no 0.011905 4 0.500000 0.000528 1.000000 29.100000 IGS_061 igs petN|psbM petN-psbM 72053 73289 0 1237 LSC 0.008585 184 989 278 122 yes 0.571429 117 0.820513 0.008663 1.000000 67.000000 psbM gene psbM psbM 73290 73394 -1 105 LSC 0.001234 5 0 117 17 no 0.011905 6 0.333333 0.001234 1.000000 26.800000 IGS_062 igs psbM|trnD-GUC psbM-trnD-GUC 73395 74431 0 1037 LSC 0.007021 127 53 222 79 no 0.422619 93 0.763441 0.006955 1.000000 60.700000 trnD-GUC tRNA trnD-GUC trnD-GUC 74432 74505 -1 74 LSC 0.001584 4 0 27 5 no 0.005952 4 0.250000 0.001584 1.000000 26.700000 IGS_063 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 74506 74922 0 417 LSC 0.009478 49 391 101 68 no 0.315476 80 0.662500 0.009718 0.988010 52.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 74923 75006 -1 84 LSC 0.005036 4 0 49 162 no 0.017857 6 0.500000 0.005036 1.000000 31.000000 IGS_064 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 75007 75065 0 59 LSC 0.007205 11 0 15 103 no 0.029762 12 0.416667 0.007205 1.000000 36.200000 trnE-UUC tRNA trnE-UUC trnE-UUC 75066 75138 -1 73 LSC 0.000000 0 0 74 30 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 IGS_065 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 75139 75452 0 314 LSC 0.024399 85 133 147 60 no 0.601190 118 0.855932 0.024417 0.958599 62.600000 trnT-GGU tRNA trnT-GGU trnT-GGU 75453 75524 1 72 LSC 0.007713 2 1 1 104 no 0.000000 5 0.000000 0.007805 1.000000 27.300000 IGS_066 igs trnT-GGU|psbD trnT-GGU-psbD 75525 76566 0 1042 LSC 0.009174 141 516 11 300 yes 0.547619 108 0.851852 0.009193 0.999040 58.500000 psbD gene psbD psbD 76567 77628 1 1062 LSC 0.002954 48 0 21 132 no 0.154762 44 0.590909 0.002954 1.000000 36.500000 psbC gene psbC psbC 77576 78997 1 1422 LSC 0.002373 63 0 300 52 no 0.226190 53 0.716981 0.002373 1.000000 39.700000 IGS_068 igs psbC|trnS-UGA psbC-trnS-UGA 78998 79134 0 137 LSC 0.035403 25 3 113 9 no 0.053571 28 0.321429 0.035029 1.000000 51.500000 trnS-UGA tRNA trnS-UGA trnS-UGA 79135 79227 -1 93 LSC 0.006757 8 0 17 3 no 0.029762 9 0.555556 0.006757 1.000000 33.300000 IGS_069 igs trnS-UGA|psbZ trnS-UGA-psbZ 79228 79556 0 329 LSC 0.007730 33 5 83 245 no 0.136905 36 0.638889 0.007739 1.000000 46.000000 psbZ gene psbZ psbZ 79557 79745 1 189 LSC 0.001721 8 0 57 56 no 0.017857 9 0.333333 0.001721 1.000000 29.400000 IGS_070 igs psbZ|trnG-GCC psbZ-trnG-GCC 79746 80062 0 317 LSC 0.003816 25 40 246 300 no 0.113095 31 0.612903 0.003816 1.000000 54.000000 trnG-GCC tRNA trnG-GCC trnG-GCC 80063 80133 1 71 LSC 0.001604 2 0 260 300 no 0.005952 3 0.333333 0.001604 1.000000 38.100000 IGS_071 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 80134 80266 0 133 LSC 0.003259 16 17 300 300 no 0.065476 18 0.611111 0.002845 1.000000 54.900000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 80267 80340 -1 74 LSC 0.000161 1 0 300 300 no 0.005952 2 0.500000 0.000161 1.000000 35.600000 IGS_072 igs trnfM-CAU|rps14 trnfM-CAU-rps14 80341 80498 0 158 LSC 0.001203 13 1 300 186 no 0.065476 14 0.785714 0.001203 1.000000 45.500000 rps14 gene rps14 rps14 80499 80801 -1 303 LSC 0.004473 20 0 300 72 no 0.065476 21 0.523810 0.004473 1.000000 35.700000 IGS_073 igs rps14|psaB rps14-psaB 80802 80910 0 109 LSC 0.005758 9 0 32 300 no 0.035714 10 0.600000 0.005758 1.000000 34.700000 psaB gene psaB psaB 80911 83115 -1 2205 LSC 0.002503 83 0 36 217 no 0.285714 70 0.685714 0.002503 1.000000 37.400000 IGS_074 igs psaB|psaA psaB-psaA 83116 83140 0 25 LSC 0.000000 0 0 170 192 no 0.000000 1 0.000000 0.000000 1.000000 31.500000 psaA gene psaA psaA 83141 85393 -1 2253 LSC 0.001733 84 0 195 157 no 0.261905 65 0.676923 0.001733 1.000000 45.600000 IGS_075 igs psaA|ycf3 psaA-ycf3 85394 86040 0 647 LSC 0.012179 71 168 167 300 yes 0.321429 77 0.701299 0.012147 1.000000 67.700000 ycf3 gene ycf3 ycf3 86041 88025 -1 1985 LSC 0.002346 114 15 19 294 no 0.488095 102 0.803922 0.002349 0.999496 43.700000 IGS_076 igs ycf3|trnS-GGA ycf3-trnS-GGA 88026 88651 0 626 LSC 0.004751 70 86 12 156 no 0.333333 67 0.835821 0.004755 1.000000 53.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 88652 88738 1 87 LSC 0.000544 2 0 84 69 no 0.011905 4 0.500000 0.000544 1.000000 27.300000 IGS_077 igs trnS-GGA|rps4 trnS-GGA-rps4 88739 89013 0 275 LSC 0.004415 31 86 171 54 no 0.148810 36 0.694444 0.004431 1.000000 46.300000 rps4 gene rps4 rps4 89014 89619 -1 606 LSC 0.005212 31 0 205 220 no 0.119048 30 0.666667 0.005212 1.000000 51.000000 IGS_078 igs rps4|trnT-UGU rps4-trnT-UGU 89620 89939 0 320 LSC 0.004323 42 39 125 75 no 0.226190 63 0.603175 0.004359 1.000000 49.600000 trnT-UGU tRNA trnT-UGU trnT-UGU 89940 90012 -1 73 LSC 0.000000 0 0 99 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_079 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 90013 90797 0 785 LSC 0.012899 130 407 172 300 yes 0.559524 112 0.839286 0.012108 1.000000 71.800000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 90798 90832 1 35 LSC 0.000000 0 0 123 300 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 91409 91458 1 50 LSC 0.000000 0 0 10 229 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_082 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 91459 91755 0 297 LSC 0.004794 33 127 60 132 no 0.208333 47 0.744681 0.004746 1.000000 48.000000 trnF-GAA tRNA trnF-GAA trnF-GAA 91756 91828 1 73 LSC 0.000000 0 0 67 59 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_083 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 91829 92595 0 767 LSC 0.007216 114 303 140 159 yes 0.529762 109 0.816514 0.007327 1.000000 66.100000 ndhJ gene ndhJ ndhJ 92596 93075 -1 480 LSC 0.001989 20 0 118 179 no 0.083333 22 0.636364 0.001989 1.000000 39.000000 IGS_084 igs ndhJ|ndhK ndhJ-ndhK 93076 93150 0 75 LSC 0.002481 7 0 300 104 no 0.029762 8 0.625000 0.002481 1.000000 39.900000 ndhK gene ndhK ndhK 93151 93918 -1 768 LSC 0.002629 54 6 300 197 no 0.178571 40 0.750000 0.002627 1.000000 54.100000 ndhC gene ndhC ndhC 93909 94271 -1 363 LSC 0.003409 20 0 181 39 no 0.071429 23 0.521739 0.003409 1.000000 32.700000 IGS_086 igs ndhC|trnV-UAC ndhC-trnV-UAC 94272 95312 0 1041 LSC 0.009356 172 574 155 300 yes 0.619048 124 0.838710 0.009262 1.000000 70.900000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 95313 95347 -1 35 LSC 0.000000 0 0 164 300 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 95934 95972 -1 39 LSC 0.000000 0 0 99 49 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_089 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 95973 96139 0 167 LSC 0.011193 17 0 138 89 no 0.047619 19 0.421053 0.011193 1.000000 43.900000 trnM-CAU tRNA trnM-CAU trnM-CAU 96140 96212 1 73 LSC 0.000324 1 0 53 16 no 0.000000 2 0.000000 0.000324 1.000000 21.800000 IGS_090 igs trnM-CAU|atpE trnM-CAU-atpE 96213 96383 0 171 LSC 0.043231 34 0 126 72 no 0.113095 27 0.703704 0.043231 1.000000 58.200000 atpE gene atpE atpE 96384 96788 -1 405 LSC 0.003576 23 0 44 260 no 0.113095 27 0.703704 0.003576 1.000000 35.100000 atpB gene atpB atpB 96785 98281 -1 1497 LSC 0.003891 80 6 100 133 no 0.273810 66 0.696970 0.003891 1.000000 46.600000 IGS_092 igs atpB|rbcL atpB-rbcL 98282 99061 0 780 LSC 0.008492 81 270 170 300 yes 0.500000 100 0.840000 0.006514 0.992308 68.300000 rbcL gene rbcL rbcL 99062 100522 1 1461 LSC 0.003363 67 0 92 83 no 0.255952 68 0.632353 0.003363 1.000000 43.300000 IGS_093 igs rbcL|accD rbcL-accD 100523 101199 0 677 LSC 0.004160 72 87 95 82 no 0.476190 101 0.792079 0.004163 0.997046 60.500000 accD gene accD accD 101200 102672 1 1473 LSC 0.006418 128 47 1 159 no 0.398810 86 0.779070 0.006422 1.000000 50.300000 IGS_094 igs accD|psaI accD-psaI 102673 103557 0 885 LSC 0.013334 138 718 96 265 yes 0.750000 141 0.893617 0.012111 0.994350 67.200000 psaI gene psaI psaI 103558 103668 1 111 LSC 0.000849 3 0 162 154 no 0.000000 4 0.000000 0.000849 1.000000 34.100000 IGS_095 igs psaI|ycf4 psaI-ycf4 103669 103981 0 313 LSC 0.008977 70 27 273 171 no 0.315476 72 0.736111 0.008677 0.990415 60.000000 ycf4 gene ycf4 ycf4 103982 104536 1 555 LSC 0.003660 33 0 111 33 no 0.130952 34 0.647059 0.003660 1.000000 38.100000 IGS_096 igs ycf4|cemA ycf4-cemA 104537 105386 0 850 LSC 0.011545 131 739 274 68 no 0.458333 102 0.754902 0.011249 1.000000 62.400000 cemA gene cemA cemA 105387 106076 1 690 LSC 0.003972 37 0 136 187 no 0.136905 39 0.589744 0.003972 1.000000 46.300000 IGS_097 igs cemA|petA cemA-petA 106077 106306 0 230 LSC 0.003301 23 4 153 212 no 0.101190 25 0.680000 0.003301 1.000000 48.300000 petA gene petA petA 106307 107269 1 963 LSC 0.001496 44 0 42 35 no 0.148810 41 0.609756 0.001496 1.000000 36.800000 IGS_098 igs petA|psbJ petA-psbJ 107270 108403 0 1134 LSC 0.012178 165 252 250 257 yes 0.559524 113 0.831858 0.012386 1.000000 74.400000 psbJ gene psbJ psbJ 108404 108547 -1 144 LSC 0.001059 7 0 255 113 no 0.029762 8 0.625000 0.001059 1.000000 34.300000 IGS_099 igs psbJ|psbL psbJ-psbL 108548 108651 0 104 LSC 0.000571 4 0 300 9 no 0.017857 5 0.600000 0.000571 1.000000 24.800000 psbL gene psbL psbL 108652 108768 -1 117 LSC 0.004909 5 0 300 124 no 0.017857 7 0.428571 0.004909 1.000000 35.900000 IGS_100 igs psbL|psbF psbL-psbF 108769 108790 0 22 LSC 0.001617 2 0 107 102 no 0.005952 3 0.333333 0.001617 1.000000 38.600000 psbF gene psbF psbF 108791 108910 -1 120 LSC 0.006605 8 0 129 52 no 0.011905 10 0.200000 0.006605 1.000000 34.200000 IGS_101 igs psbF|psbE psbF-psbE 108911 108920 0 10 LSC 0.000000 0 0 17 42 no 0.000000 1 0.000000 NA 1.000000 20.000000 psbE gene psbE psbE 108921 109172 -1 252 LSC 0.001703 9 0 27 31 no 0.041667 10 0.700000 0.001703 1.000000 26.800000 IGS_102 igs psbE|petL psbE-petL 109173 110696 0 1524 LSC 0.009621 239 963 209 60 yes 0.684524 133 0.864662 0.008894 0.996719 64.000000 petL gene petL petL 110697 110792 1 96 LSC 0.005500 6 0 70 300 no 0.029762 7 0.714286 0.005500 1.000000 34.800000 IGS_103 igs petL|petG petL-petG 110793 110968 0 176 LSC 0.003833 24 5 35 153 no 0.136905 33 0.696970 0.003828 1.000000 41.700000 petG gene petG petG 110969 111082 1 114 LSC 0.000926 4 0 211 39 no 0.011905 5 0.400000 0.000926 1.000000 26.700000 IGS_104 igs petG|trnW-CCA petG-trnW-CCA 111083 111204 0 122 LSC 0.011995 16 5 300 84 no 0.071429 20 0.600000 0.012002 1.000000 49.400000 trnW-CCA tRNA trnW-CCA trnW-CCA 111205 111278 -1 74 LSC 0.000638 2 0 4 10 no 0.005952 3 0.333333 0.000638 1.000000 22.800000 IGS_105 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 111279 111407 0 129 LSC 0.017506 21 26 78 77 no 0.172619 52 0.557692 0.016763 1.000000 54.100000 trnP-UGG tRNA trnP-UGG trnP-UGG 111408 111481 -1 74 LSC 0.000161 1 0 29 3 no 0.005952 2 0.500000 0.000161 1.000000 20.800000 IGS_106 igs trnP-UGG|psaJ trnP-UGG-psaJ 111482 111806 0 325 LSC 0.005978 33 62 103 223 no 0.220238 54 0.685185 0.005953 1.000000 52.500000 psaJ gene psaJ psaJ 111807 111965 1 159 LSC 0.000821 9 0 34 64 no 0.047619 10 0.800000 0.000821 1.000000 29.600000 IGS_107 igs psaJ|rpl33 psaJ-rpl33 111966 112489 0 524 LSC 0.010920 88 238 193 209 yes 0.351190 80 0.737500 0.010907 1.000000 68.000000 rpl33 gene rpl33 rpl33 112490 112690 1 201 LSC 0.002334 20 0 76 8 no 0.065476 19 0.578947 0.002334 1.000000 34.100000 IGS_108 igs rpl33|rps18 rpl33-rps18 112691 112920 0 230 LSC 0.006129 29 9 277 41 no 0.125000 30 0.700000 0.006130 1.000000 44.300000 rps18 gene rps18 rps18 112921 113226 1 306 LSC 0.002244 9 0 25 26 no 0.035714 10 0.600000 0.002244 1.000000 26.100000 IGS_109 igs rps18|rpl20 rps18-rpl20 113227 113493 0 267 LSC 0.008226 40 11 264 300 no 0.166667 47 0.595745 0.008249 1.000000 58.200000 rpl20 gene rpl20 rpl20 113494 113847 -1 354 LSC 0.001918 21 0 137 176 no 0.077381 21 0.619048 0.001918 1.000000 39.900000 IGS_110 igs rpl20|rps12 rpl20-rps12 113848 114557 0 710 LSC 0.002297 51 36 300 58 no 0.202381 52 0.653846 0.002297 1.000000 49.400000 rps12_part1 gene rps12 rps12 114558 114671 -1 114 LSC 0.003573 3 0 300 114 no 0.000000 4 0.000000 0.003573 1.000000 32.200000 IGS_111 igs rps12|clpP rps12-clpP 114672 114811 0 140 LSC 0.009867 19 6 55 5 no 0.065476 19 0.578947 0.009874 1.000000 42.600000 clpP gene clpP clpP 114812 116940 -1 2129 LSC 0.007004 205 237 3 300 no 0.755952 141 0.900709 0.006648 0.999061 59.300000 IGS_112 igs clpP|psbB clpP-psbB 116941 117404 0 464 LSC 0.005233 61 65 66 227 no 0.267857 63 0.714286 0.005246 1.000000 53.100000 psbB gene psbB psbB 117405 118931 1 1527 LSC 0.001272 64 0 39 114 no 0.267857 54 0.833333 0.001272 1.000000 38.700000 IGS_113 igs psbB|psbT psbB-psbT 118932 119103 0 172 LSC 0.005724 12 13 47 89 no 0.101190 27 0.629630 0.005717 1.000000 41.700000 psbT gene psbT psbT 119104 119211 1 108 LSC 0.002869 4 1 57 157 no 0.023810 8 0.500000 0.002869 1.000000 30.500000 IGS_114 igs psbT|psbN psbT-psbN 119212 119272 0 61 LSC 0.012820 10 0 18 96 no 0.023810 9 0.444444 0.012820 1.000000 38.800000 psbN gene psbN psbN 119273 119404 -1 132 LSC 0.004036 3 0 79 300 no 0.005952 4 0.250000 0.004036 1.000000 29.400000 IGS_115 igs psbN|psbH psbN-psbH 119405 119515 0 111 LSC 0.001167 7 6 35 300 no 0.041667 9 0.777778 0.001173 1.000000 36.800000 psbH gene psbH psbH 119516 119737 1 222 LSC 0.001229 18 0 146 102 no 0.095238 18 0.888889 0.001229 1.000000 38.900000 IGS_116 igs psbH|petB psbH-petB 119738 119862 0 125 LSC 0.007815 11 1 300 107 no 0.041667 13 0.538462 0.007816 1.000000 43.100000 petB gene petB petB 119863 121297 1 1435 LSC 0.003241 105 60 14 233 no 0.505952 107 0.794393 0.003197 0.998606 51.300000 IGS_117 igs petB|petD petB-petD 121298 121484 0 187 LSC 0.001819 13 7 159 46 no 0.065476 18 0.611111 0.001820 1.000000 37.600000 petD gene petD petD 121485 122751 1 1267 LSC 0.005091 93 26 300 79 no 0.303571 76 0.671053 0.005092 1.000000 50.600000 IGS_118 igs petD|rpoA petD-rpoA 122752 122921 0 170 LSC 0.010762 27 24 300 45 no 0.166667 44 0.636364 0.010702 1.000000 48.700000 rpoA gene rpoA rpoA 122922 123941 -1 1020 LSC 0.004164 64 0 75 300 no 0.172619 51 0.568627 0.004164 1.000000 43.600000 IGS_119 igs rpoA|rps11 rpoA-rps11 123942 124001 0 60 LSC 0.004015 6 0 300 300 no 0.017857 6 0.500000 0.004015 1.000000 48.400000 rps11 gene rps11 rps11 124002 124418 -1 417 LSC 0.001714 22 0 300 53 no 0.095238 25 0.640000 0.001714 1.000000 34.300000 IGS_120 igs rps11|rpl36 rps11-rpl36 124419 124561 0 143 LSC 0.017151 33 26 300 72 no 0.261905 62 0.709677 0.017335 0.993007 54.500000 rpl36 gene rpl36 rpl36 124562 124675 -1 114 LSC 0.003776 7 0 31 68 no 0.029762 8 0.625000 0.003776 1.000000 31.000000 IGS_121 igs rpl36|infA rpl36-infA 124676 124780 0 105 LSC 0.012041 18 10 41 6 no 0.119048 30 0.666667 0.012075 1.000000 45.600000 infA gene infA infA 124781 125014 -1 234 LSC 0.003026 12 0 29 38 no 0.035714 11 0.545455 0.003026 1.000000 29.400000 IGS_122 igs infA|rps8 infA-rps8 125015 125130 0 116 LSC 0.006406 7 4 227 299 no 0.017857 11 0.272727 0.006376 1.000000 48.800000 rps8 gene rps8 rps8 125131 125535 -1 405 LSC 0.002871 22 0 77 26 no 0.095238 24 0.666667 0.002871 1.000000 32.800000 IGS_123 igs rps8|rpl14 rps8-rpl14 125536 125707 0 172 LSC 0.027011 45 50 105 300 yes 0.535714 108 0.833333 0.021658 0.988372 65.900000 rpl14 gene rpl14 rpl14 125708 126076 -1 369 LSC 0.001489 25 0 92 114 no 0.095238 25 0.640000 0.001489 1.000000 38.000000 IGS_124 igs rpl14|rpl16 rpl14-rpl16 126077 126213 0 137 LSC 0.011711 20 15 300 14 no 0.119048 36 0.555556 0.008214 0.978102 45.200000 rpl16 gene rpl16 rpl16 126214 127713 -1 1500 LSC 0.007540 177 153 15 30 no 0.726190 141 0.865248 0.007179 0.998000 61.600000 IGS_125 igs rpl16|rps3 rpl16-rps3 127714 127857 0 144 LSC 0.012152 26 74 52 192 no 0.190476 46 0.695652 0.011855 1.000000 50.100000 rps3 gene rps3 rps3 127858 128514 -1 657 LSC 0.006345 49 10 57 12 no 0.220238 58 0.637931 0.006345 1.000000 44.100000 IGS_126 igs rps3|rpl22 rps3-rpl22 128515 128562 0 48 LSC 0.024010 8 31 89 90 no 0.071429 21 0.571429 0.023847 1.000000 56.100000 rpl22 gene rpl22 rpl22 128563 128949 -1 387 LSC 0.003498 32 0 12 21 no 0.148810 36 0.694444 0.003498 1.000000 36.200000 IGS_127 igs rpl22|rps19 rpl22-rps19 128950 129062 0 113 IRa 0.009357 18 56 296 232 no 0.172619 51 0.568627 0.009339 0.991150 58.800000 rps19 gene rps19 rps19 129063 129341 -1 279 IRa 0.002516 7 0 91 242 no 0.017857 7 0.428571 0.002516 1.000000 30.200000 IGS_128 igs rps19|trnH-GUG rps19-trnH-GUG 129342 129480 0 139 IRa 0.000171 2 11 46 103 no 0.029762 8 0.625000 0.000172 1.000000 30.800000 trnH-GUG tRNA trnH-GUG trnH-GUG 129481 129555 1 75 IRa 0.000000 0 0 185 28 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_129 igs trnH-GUG|rpl2 trnH-GUG-rpl2 129556 129598 0 43 IRa 0.014886 5 0 260 300 no 0.041667 12 0.583333 0.014886 1.000000 53.700000 rpl2 gene rpl2 rpl2 129599 131083 -1 1485 IRa 0.000187 13 0 14 300 no 0.053571 12 0.750000 0.000187 1.000000 28.200000 IGS_130 igs rpl2|rpl23 rpl2-rpl23 131084 131107 0 24 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 131108 131389 -1 282 IRa 0.000168 3 12 300 128 no 0.011905 5 0.400000 0.000168 1.000000 35.300000 IGS_131 igs rpl23|trnI-CAU rpl23-trnI-CAU 131390 131554 0 165 IRa 0.002561 5 0 300 112 no 0.017857 6 0.500000 0.002561 1.000000 32.400000 trnI-CAU tRNA trnI-CAU trnI-CAU 131555 131628 -1 74 IRa 0.000000 0 0 36 38 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_132 igs trnI-CAU|ycf2 trnI-CAU-ycf2 131629 131696 0 68 IRa 0.004975 3 9 110 300 no 0.011905 5 0.400000 0.004998 1.000000 41.200000 ycf2 gene ycf2 ycf2 131697 138587 1 6891 IRa 0.000834 138 162 29 25 no 0.416667 88 0.795455 0.000824 0.993034 33.800000 IGS_133 igs ycf2|ycf15 ycf2-ycf15 138588 138655 0 68 IRa 0.013386 2 0 234 300 no 0.000000 4 0.000000 0.013386 1.000000 43.500000 ycf15 gene ycf15 ycf15 138656 138888 -1 233 IRa 0.000501 3 4 6 300 no 0.011905 5 0.400000 0.000501 1.000000 23.400000 IGS_134 igs ycf15|trnL-CAA ycf15-trnL-CAA 138889 139615 0 727 IRa 0.000641 16 173 239 300 no 0.041667 16 0.437500 0.000645 1.000000 49.800000 trnL-CAA tRNA trnL-CAA trnL-CAA 139616 139696 -1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_135 igs trnL-CAA|ndhB trnL-CAA-ndhB 139697 140244 0 548 IRa 0.000130 5 0 300 300 no 0.023810 6 0.666667 0.000130 1.000000 40.600000 ndhB gene ndhB ndhB 140245 142477 -1 2233 IRa 0.000563 20 5 300 300 no 0.059524 19 0.526316 0.000563 1.000000 41.200000 IGS_136 igs ndhB|rps7 ndhB-rps7 142478 142746 0 269 IRa 0.000440 6 0 300 300 no 0.029762 8 0.625000 0.000440 1.000000 37.300000 rps7 gene rps7 rps7 142747 143214 -1 468 IRa 0.000025 1 0 300 300 no 0.005952 2 0.500000 0.000025 1.000000 37.600000 IGS_137 igs rps7|rps12 rps7-rps12 143215 143272 0 58 IRa 0.000819 3 0 300 300 no 0.011905 4 0.500000 0.000819 1.000000 40.800000 rps12_part2 gene rps12 rps12 143273 144071 -1 799 IRa 0.000286 7 0 300 153 no 0.023810 8 0.500000 0.000286 1.000000 38.100000 IGS_138 igs rps12|trnV-GAC rps12-trnV-GAC 144072 145773 0 1702 IRa 0.000997 34 283 300 253 no 0.160714 39 0.692308 0.001005 1.000000 51.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 145774 145845 1 72 IRa 0.000000 0 0 300 181 no 0.000000 1 0.000000 0.000000 1.000000 32.300000 IGS_139 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 145846 146076 0 231 IRa 0.002250 3 6 300 300 no 0.011905 5 0.400000 0.002254 1.000000 39.800000 rrn16S rRNA rrn16S rrn16S 146077 147567 1 1491 IRa 0.000161 6 0 49 212 no 0.017857 7 0.428571 0.000161 1.000000 29.600000 IGS_140 igs rrn16S|trnI-GAU rrn16S-trnI-GAU 147568 147883 0 316 IRa 0.019351 19 7 300 300 no 0.035714 11 0.545455 0.019371 1.000000 53.700000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 147884 147925 1 42 IRa 0.000000 0 0 86 300 no 0.000000 1 0.000000 0.000000 1.000000 25.200000 ycf68 gene ycf68 ycf68 148025 148400 1 376 IRa 0.000281 5 0 227 300 no 0.023810 6 0.666667 0.000281 1.000000 37.600000 IGS_143 igs ycf68|trnI-GAU ycf68-trnI-GAU 148401 148862 0 462 IRa 0.000230 5 0 300 300 no 0.023810 7 0.571429 0.000230 1.000000 39.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 148863 148897 1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_144 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 148898 148961 0 64 IRa 0.000186 1 0 300 300 no 0.005952 2 0.500000 0.000186 1.000000 35.900000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 148962 148999 1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 149801 149835 1 35 IRa 0.000000 0 0 230 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_147 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 149836 149981 0 146 IRa 0.002450 5 0 265 300 no 0.011905 6 0.333333 0.002450 1.000000 39.400000 rrn23S rRNA rrn23S rrn23S 149982 152791 1 2810 IRa 0.000128 13 0 300 300 no 0.041667 14 0.500000 0.000128 1.000000 38.700000 IGS_148 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 152792 152889 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 152890 152992 1 103 IRa 0.000116 1 0 300 300 no 0.005952 2 0.500000 0.000116 1.000000 35.100000 IGS_149 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 152993 153216 0 224 IRa 0.000709 4 0 300 300 no 0.017857 5 0.600000 0.000709 1.000000 36.600000 rrn5S rRNA rrn5S rrn5S 153217 153337 1 121 IRa 0.000197 2 0 300 300 no 0.011905 3 0.666667 0.000197 1.000000 36.100000 IGS_150 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 153338 153592 0 255 IRa 0.000649 8 37 300 300 no 0.047619 11 0.727273 0.000648 1.000000 45.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 153593 153666 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_151 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 153667 154265 0 599 IRa 0.001037 26 163 300 300 no 0.083333 25 0.560000 0.001079 0.969950 52.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 154266 154337 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_152 igs trnN-GUU|ycf1 trnN-GUU-ycf1 154338 154653 0 316 IRa 0.000912 14 1 300 8 no 0.023810 6 0.666667 0.000913 1.000000 26.500000 ycf1 gene ycf1 ycf1 154654 156959 1 2306 IRa 0.003076 68 2094 300 76 no 0.250000 62 0.677419 0.007589 0.463573 32.100000 ndhF gene ndhF ndhF 156958 159171 -1 2214 SSC 0.005243 185 2214 3 10 no 0.398810 84 0.797619 0.023405 1.000000 46.200000 IGS_154 igs ndhF|rpl32 ndhF-rpl32 159172 797 0 797 SSC 0.022013 79 797 300 200 no 0.148810 27 0.925926 0.020880 0.000000 52.600000