Hotspot

trnT-UGU-trnL-UAA

LSC · 50281-51914 · 1634 bp

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Pi 0.00477
MarkerSeek score 67.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1587-1689 bp 1.0 83.9
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1595-1697 bp 1.0 83.3
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1619-1721 bp 1.0 83.0
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG CCAAGGCTCAATCCAATCCA 55.0 50.0 57.9 57.9 1625-1727 bp 1.0 82.7
trnT-UGU-trnL-UAA_p5 GCGATGCTCTAACCTCTGAG ACCAAGGCTCAATCCAATCC 55.0 50.0 57.9 57.9 1626-1728 bp 1.0 82.7