Hotspot

trnT-UGU-trnL-UAA

LSC · 49704-50594 · 891 bp

Back to Thepparatia

Pi 0.00449
MarkerSeek score 55.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 941-957 bp 1.0 79.2
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 949-965 bp 1.0 78.7
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 973-989 bp 1.0 78.4
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 981-997 bp 1.0 77.8
trnT-UGU-trnL-UAA_p5 CAAATAGGGAAAGCCGGCTA ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 995-1011 bp 1.0 77.5