feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH tRNA trnH trnH 4 76 -1 73 LSC 0.000000 0 0 159 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_001 igs trnH|psbA trnH-psbA 77 365 0 289 LSC 0.014440 4 12 232 200 yes 1.000000 2 1.000000 NA 0.958478 64.800000 psbA gene psbA psbA 366 1427 -1 1062 LSC 0.004708 5 0 109 64 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_002 igs psbA|trnK psbA-trnK 1428 1707 0 280 LSC 0.025271 7 3 197 68 no 1.000000 2 1.000000 NA 0.989286 58.100000 trnK_part2 tRNA trnK trnK 1708 1742 -1 35 LSC 0.000000 0 0 22 33 no 0.000000 1 0.000000 NA 1.000000 20.400000 matK gene matK matK 2017 3603 -1 1587 LSC 0.006301 10 0 15 8 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_005 igs matK|trnK matK-trnK 3604 4308 0 705 LSC 0.014493 10 15 58 110 no 1.000000 2 1.000000 NA 0.978723 58.500000 trnK_part1 tRNA trnK trnK 4309 4345 -1 37 LSC 0.000000 0 0 167 73 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_006 igs trnK|rps16 trnK-rps16 4346 4397 0 52 LSC 0.000000 0 4 204 21 no 1.000000 2 1.000000 NA 0.923077 43.200000 rps16 gene rps16 rps16 4398 5518 -1 1121 LSC 0.021179 23 35 256 51 yes 1.000000 2 1.000000 NA 0.968778 62.700000 IGS_007 igs rps16|trnQ rps16-trnQ 5519 5911 0 393 LSC 0.021448 8 20 10 82 no 1.000000 2 1.000000 NA 0.949109 57.200000 trnQ tRNA trnQ trnQ 5912 5983 -1 72 LSC 0.000000 0 0 2 10 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_008 igs trnQ|psbK trnQ-psbK 5984 6319 0 336 LSC 0.017857 6 0 74 68 no 1.000000 2 1.000000 NA 1.000000 53.600000 psbK gene psbK psbK 6320 6505 1 186 LSC 0.005376 1 0 3 66 no 1.000000 2 1.000000 NA 1.000000 40.800000 IGS_009 igs psbK|psbI psbK-psbI 6506 6898 0 393 LSC 0.012723 5 0 117 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 psbI gene psbI psbI 6899 7009 1 111 LSC 0.000000 0 0 122 255 no 0.000000 1 0.000000 NA 1.000000 27.900000 IGS_010 igs psbI|trnS psbI-trnS 7010 7101 0 92 LSC 0.000000 0 0 233 163 no 0.000000 1 0.000000 NA 1.000000 31.000000 trnS tRNA trnS trnS 7102 7189 1 88 LSC 0.000000 0 0 300 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 IGS_011 igs trnS|trnG trnS-trnG 7190 7811 0 622 LSC 0.032206 20 1 300 169 yes 1.000000 2 1.000000 NA 0.998392 75.100000 trnG_part1 tRNA trnG trnG 7812 7834 1 23 LSC 0.000000 0 0 46 146 no 0.000000 1 0.000000 NA 1.000000 22.200000 trnG_part2 tRNA trnG trnG 8557 8605 1 49 LSC 0.000000 0 0 300 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_014 igs trnG|trnR trnG-trnR 8606 8758 0 153 LSC 0.027972 4 10 300 126 yes 1.000000 2 1.000000 NA 0.934641 67.200000 trnR tRNA trnR trnR 8759 8830 1 72 LSC 0.000000 0 0 6 54 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_015 igs trnR|atpA trnR-atpA 8831 9134 0 304 LSC 0.016447 5 0 78 161 no 1.000000 2 1.000000 NA 1.000000 52.900000 atpA gene atpA atpA 9135 10658 -1 1524 LSC 0.003281 5 0 176 73 no 1.000000 2 1.000000 NA 1.000000 51.100000 IGS_016 igs atpA|atpF atpA-atpF 10659 10746 0 88 LSC 0.011364 1 0 38 177 no 1.000000 2 1.000000 NA 1.000000 46.900000 atpF gene atpF atpF 10747 12052 -1 1306 LSC 0.004594 6 0 14 51 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_017 igs atpF|atpH atpF-atpH 12053 12494 0 442 LSC 0.025287 11 7 292 300 yes 1.000000 2 1.000000 NA 0.984163 71.500000 atpH gene atpH atpH 12495 12740 -1 246 LSC 0.000000 0 0 19 136 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_018 igs atpH|atpI atpH-atpI 12741 13240 0 500 LSC 0.010081 5 4 265 300 yes 1.000000 2 1.000000 NA 0.992000 63.200000 atpI gene atpI atpI 13241 13990 -1 750 LSC 0.005333 4 0 126 258 no 1.000000 2 1.000000 NA 1.000000 56.300000 IGS_019 igs atpI|rps2 atpI-rps2 13991 14224 0 234 LSC 0.000000 0 0 42 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 rps2 gene rps2 rps2 14225 14935 -1 711 LSC 0.002813 2 0 276 96 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 14936 15170 0 235 LSC 0.008511 2 0 245 228 no 1.000000 2 1.000000 NA 1.000000 57.400000 rpoC2 gene rpoC2 rpoC2 15171 19298 -1 4128 LSC 0.005087 21 0 100 298 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 19299 19493 0 195 LSC 0.000000 0 1 65 103 no 1.000000 2 1.000000 NA 0.994872 42.900000 rpoC1 gene rpoC1 rpoC1 19494 22325 -1 2832 LSC 0.003532 10 1 260 226 no 1.000000 2 1.000000 NA 0.999647 58.000000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 22326 22351 0 26 LSC 0.000000 0 0 237 200 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoB gene rpoB rpoB 22352 25570 -1 3219 LSC 0.002175 7 0 263 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 IGS_023 igs rpoB|trnC rpoB-trnC 25571 26679 0 1109 LSC 0.005415 6 1 275 73 no 1.000000 2 1.000000 NA 0.999098 52.400000 trnC tRNA trnC trnC 26680 26750 1 71 LSC 0.000000 0 0 300 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_024 igs trnC|ycf6 trnC-ycf6 26751 27358 0 608 LSC 0.009917 6 3 300 56 no 1.000000 2 1.000000 NA 0.995066 54.100000 ycf6 gene ycf6 ycf6 27359 27448 1 90 LSC 0.011111 1 0 212 25 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_025 igs ycf6|psbM ycf6-psbM 27449 27973 0 525 LSC 0.007890 4 18 33 206 no 1.000000 2 1.000000 NA 0.965714 52.500000 psbM gene psbM psbM 27974 28078 -1 105 LSC 0.000000 0 0 212 101 no 0.000000 1 0.000000 NA 1.000000 26.300000 IGS_026 igs psbM|trnD psbM-trnD 28079 29112 0 1034 LSC 0.010690 11 5 300 144 no 1.000000 2 1.000000 NA 0.995164 61.200000 trnD tRNA trnD trnD 29113 29186 -1 74 LSC 0.000000 0 0 42 70 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_027 igs trnD|trnY trnD-trnY 29187 29599 0 413 LSC 0.009685 4 0 116 117 no 1.000000 2 1.000000 NA 1.000000 54.100000 trnY tRNA trnY trnY 29600 29683 -1 84 LSC 0.000000 0 0 132 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_028 igs trnY|trnE trnY-trnE 29684 29738 0 55 LSC 0.018182 1 0 216 74 no 1.000000 2 1.000000 NA 1.000000 53.500000 trnE tRNA trnE trnE 29739 29811 -1 73 LSC 0.000000 0 0 21 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_029 igs trnE|trnT trnE-trnT 29812 30238 0 427 LSC 0.007426 3 23 94 109 no 1.000000 2 1.000000 NA 0.946136 56.200000 trnT tRNA trnT trnT 30239 30310 1 72 LSC 0.000000 0 0 29 37 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_030 igs trnT|psbD trnT-psbD 30311 31632 0 1322 LSC 0.006349 8 62 101 300 no 1.000000 2 1.000000 NA 0.953101 59.500000 psbD gene psbD psbD 31633 32694 1 1062 LSC 0.000000 0 0 178 300 no 0.000000 1 0.000000 NA 1.000000 38.400000 psbC gene psbC psbC 32678 34063 1 1386 LSC 0.002165 3 0 300 114 no 1.000000 2 1.000000 NA 1.000000 53.500000 IGS_032 igs psbC|trnS psbC-trnS 34064 34243 0 180 LSC 0.005556 1 0 300 210 no 1.000000 2 1.000000 NA 1.000000 55.700000 trnS tRNA trnS trnS 34244 34336 1 93 LSC 0.000000 0 0 65 117 no 0.000000 1 0.000000 NA 1.000000 23.600000 IGS_033 igs trnS|ycf9 trnS-ycf9 34337 34678 0 342 LSC 0.005935 2 5 158 107 no 1.000000 2 1.000000 NA 0.985380 51.200000 ycf9 gene ycf9 ycf9 34679 34867 1 189 LSC 0.005291 1 0 137 100 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_034 igs ycf9|trnG ycf9-trnG 34868 35280 0 413 LSC 0.026634 11 0 81 287 yes 1.000000 2 1.000000 NA 1.000000 61.200000 IGS_035 igs trnG|trnfM trnG-trnfM 35352 35487 0 136 LSC 0.000000 0 0 132 80 no 0.000000 1 0.000000 NA 1.000000 24.800000 trnfM tRNA trnfM trnfM 35488 35561 -1 74 LSC 0.000000 0 0 268 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_036 igs trnfM|rps14 trnfM-rps14 35562 35722 0 161 LSC 0.006211 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.100000 rps14 gene rps14 rps14 35723 36025 -1 303 LSC 0.000000 0 0 154 86 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_037 igs rps14|psaB rps14-psaB 36026 36156 0 131 LSC 0.015267 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.300000 psaB gene psaB psaB 36157 38361 -1 2205 LSC 0.000454 1 0 34 256 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_038 igs psaB|psaA psaB-psaA 38362 38386 0 25 LSC 0.000000 0 0 300 231 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 38387 40639 -1 2253 LSC 0.000444 1 0 300 225 no 1.000000 2 1.000000 NA 1.000000 57.400000 IGS_039 igs psaA|ycf3 psaA-ycf3 40640 41411 0 772 LSC 0.003886 3 0 300 267 no 1.000000 2 1.000000 NA 1.000000 61.000000 ycf3 gene ycf3 ycf3 41412 42591 -1 1180 LSC 0.001701 2 4 145 300 no 1.000000 2 1.000000 NA 0.996610 55.900000 IGS_040 igs ycf3|trnS ycf3-trnS 42592 43668 0 1077 LSC 0.001873 2 9 300 300 no 1.000000 2 1.000000 NA 0.991643 60.600000 trnS tRNA trnS trnS 43669 43755 1 87 LSC 0.000000 0 0 158 300 no 0.000000 1 0.000000 NA 1.000000 30.600000 IGS_041 igs trnS|rps4 trnS-rps4 43756 44035 0 280 LSC 0.000000 0 13 245 300 no 1.000000 2 1.000000 NA 0.953571 57.000000 rps4 gene rps4 rps4 44036 44641 -1 606 LSC 0.000000 0 0 300 202 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_042 igs rps4|trnT rps4-trnT 44642 45026 0 385 LSC 0.007792 3 0 300 154 no 1.000000 2 1.000000 NA 1.000000 55.300000 trnT tRNA trnT trnT 45027 45099 -1 73 LSC 0.000000 0 0 47 81 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_043 igs trnT|trnL trnT-trnL 45100 45919 0 820 LSC 0.013431 11 1 120 300 yes 1.000000 2 1.000000 NA 0.998780 60.600000 trnL_part1 tRNA trnL trnL 45920 45954 1 35 LSC 0.000000 0 0 146 300 no 0.000000 1 0.000000 NA 1.000000 29.700000 trnL_part2 tRNA trnL trnL 46282 46331 1 50 LSC 0.000000 0 0 300 172 no 0.000000 1 0.000000 NA 1.000000 31.600000 IGS_046 igs trnL|trnF trnL-trnF 46332 46695 0 364 LSC 0.008475 3 10 300 81 no 1.000000 2 1.000000 NA 0.972527 52.400000 trnF tRNA trnF trnF 46696 46768 1 73 LSC 0.000000 0 0 158 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_047 igs trnF|ndhJ trnF-ndhJ 46769 47337 0 569 LSC 0.003534 2 3 231 259 no 1.000000 2 1.000000 NA 0.994728 60.600000 ndhJ gene ndhJ ndhJ 47338 47814 -1 477 LSC 0.002096 1 0 300 61 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_048 igs ndhJ|psbG ndhJ-psbG 47815 47916 0 102 LSC 0.009804 1 0 217 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 psbG gene psbG psbG 47917 48594 -1 678 LSC 0.000000 0 0 40 300 no 0.000000 1 0.000000 NA 1.000000 28.000000 IGS_049 igs psbG|ndhC psbG-ndhC 48595 48655 0 61 LSC 0.000000 0 3 300 300 no 1.000000 2 1.000000 NA 0.950820 57.300000 ndhC gene ndhC ndhC 48656 49018 -1 363 LSC 0.002755 1 0 300 40 no 1.000000 2 1.000000 NA 1.000000 43.400000 IGS_050 igs ndhC|trnV ndhC-trnV 49019 49431 0 413 LSC 0.004878 2 3 8 300 no 1.000000 2 1.000000 NA 0.992736 44.000000 trnV_part2 tRNA trnV trnV 49432 49466 -1 35 LSC 0.000000 0 0 216 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV_part1 tRNA trnV trnV 50069 50107 -1 39 LSC 0.000000 0 0 134 84 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_053 igs trnV|trnM trnV-trnM 50108 50291 0 184 LSC 0.005435 1 0 173 300 no 1.000000 2 1.000000 NA 1.000000 53.600000 trnM tRNA trnM trnM 50292 50364 1 73 LSC 0.000000 0 0 99 300 no 0.000000 1 0.000000 NA 1.000000 26.200000 IGS_054 igs trnM|atpE trnM-atpE 50365 50502 0 138 LSC 0.000000 0 0 172 300 no 0.000000 1 0.000000 NA 1.000000 31.600000 atpE gene atpE atpE 50503 50901 -1 399 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 35.800000 IGS_055 igs atpE|atpB atpE-atpB 50902 50921 0 20 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpB gene atpB atpB 50922 52394 -1 1473 LSC 0.000000 0 0 300 214 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_056 igs atpB|rbcL atpB-rbcL 52395 53226 0 832 LSC 0.006061 5 7 300 300 no 1.000000 2 1.000000 NA 0.991587 63.000000 rbcL gene rbcL rbcL 53227 54666 1 1440 LSC 0.000694 1 0 245 186 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_057 igs rbcL|accD rbcL-accD 54667 55231 0 565 LSC 0.014414 8 10 300 35 no 1.000000 2 1.000000 NA 0.982301 55.600000 accD gene accD accD 55232 56683 1 1452 LSC 0.006198 9 0 118 97 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_058 igs accD|psaI accD-psaI 56684 57364 0 681 LSC 0.005874 4 0 18 300 no 1.000000 2 1.000000 NA 1.000000 48.500000 psaI gene psaI psaI 57365 57478 1 114 LSC 0.000000 0 0 145 300 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_059 igs psaI|ycf4 psaI-ycf4 57479 57886 0 408 LSC 0.002457 1 1 259 300 no 1.000000 2 1.000000 NA 0.997549 56.400000 ycf4 gene ycf4 ycf4 57887 58447 1 561 LSC 0.000000 0 0 32 19 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_060 igs ycf4|ycf10/cemA ycf4-ycf10/cemA 58448 58924 0 477 LSC 0.008386 4 0 300 4 no 1.000000 2 1.000000 NA 1.000000 46.300000 ycf10/cemA gene ycf10/cemA ycf10/cemA 58925 59614 1 690 LSC 0.001451 1 1 300 96 no 1.000000 2 1.000000 NA 0.998551 51.900000 IGS_061 igs ycf10/cemA|petA ycf10/cemA-petA 59615 59726 0 112 LSC 0.008929 1 0 300 194 no 1.000000 2 1.000000 NA 1.000000 57.200000 petA gene petA petA 59727 60689 1 963 LSC 0.004154 4 0 15 163 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_062 igs petA|psbJ petA-psbJ 60690 61556 0 867 LSC 0.018519 16 3 81 128 yes 1.000000 2 1.000000 NA 0.996540 60.800000 psbJ gene psbJ psbJ 61557 61679 -1 123 LSC 0.000000 0 0 39 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_063 igs psbJ|psbL psbJ-psbL 61680 61822 0 143 LSC 0.006993 1 0 162 18 no 1.000000 2 1.000000 NA 1.000000 42.900000 psbL gene psbL psbL 61823 61939 -1 117 LSC 0.008547 1 0 137 282 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_064 igs psbL|psbF psbL-psbF 61940 61960 0 21 LSC 0.000000 0 0 98 261 no 0.000000 1 0.000000 NA 1.000000 26.100000 psbF gene psbF psbF 61961 62080 -1 120 LSC 0.000000 0 0 119 141 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_065 igs psbF|psbE psbF-psbE 62081 62089 0 9 LSC 0.000000 0 0 239 132 no 0.000000 1 0.000000 NA 1.000000 28.600000 psbE gene psbE psbE 62090 62341 -1 252 LSC 0.003968 1 0 248 58 no 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_066 igs psbE|ORF31 psbE-ORF31 62342 63305 0 964 LSC 0.008475 8 20 119 60 no 1.000000 2 1.000000 NA 0.979253 55.100000 ORF31 gene ORF31 ORF31 63306 63401 1 96 LSC 0.010417 1 0 148 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_067 igs ORF31|petG ORF31-petG 63402 63585 0 184 LSC 0.000000 0 1 35 187 no 1.000000 2 1.000000 NA 0.994565 40.700000 petG gene petG petG 63586 63699 1 114 LSC 0.000000 0 0 219 73 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_068 igs petG|trnW petG-trnW 63700 63822 0 123 LSC 0.008130 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 trnW tRNA trnW trnW 63823 63896 -1 74 LSC 0.000000 0 0 49 300 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_069 igs trnW|trnP trnW-trnP 63897 64093 0 197 LSC 0.000000 0 0 123 156 no 0.000000 1 0.000000 NA 1.000000 28.000000 trnP tRNA trnP trnP 64094 64167 -1 74 LSC 0.000000 0 0 300 82 no 0.000000 1 0.000000 NA 1.000000 24.900000 IGS_070 igs trnP|psaJ trnP-psaJ 64168 64515 0 348 LSC 0.020349 7 4 300 161 yes 1.000000 2 1.000000 NA 0.988506 63.400000 psaJ gene psaJ psaJ 64516 64644 1 129 LSC 0.000000 0 0 170 32 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 64645 65101 0 457 LSC 0.011416 5 19 299 286 yes 1.000000 2 1.000000 NA 0.958425 66.300000 rpl33 gene rpl33 rpl33 65102 65302 1 201 LSC 0.000000 0 0 106 85 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_072 igs rpl33|rps18 rpl33-rps18 65303 65594 0 292 LSC 0.010274 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.400000 rps18 gene rps18 rps18 65595 65900 1 306 LSC 0.000000 0 0 7 185 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_073 igs rps18|rpl20 rps18-rpl20 65901 66179 0 279 LSC 0.003584 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 rpl20 gene rpl20 rpl20 66180 66533 -1 354 LSC 0.002825 1 0 93 184 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_074 igs rpl20|rps12 rpl20-rps12 66534 67292 0 759 LSC 0.005270 4 0 32 205 no 1.000000 2 1.000000 NA 1.000000 49.200000 rps12_part1 gene rps12 rps12 67293 67406 -1 114 LSC 0.000000 0 0 93 91 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_075 igs rps12|clpP rps12-clpP 67407 67594 0 188 LSC 0.010638 2 0 207 264 no 1.000000 2 1.000000 NA 1.000000 58.600000 clpP gene clpP clpP 67595 69652 -1 2058 LSC 0.005897 12 23 41 66 no 1.000000 2 1.000000 NA 0.988824 50.100000 IGS_076 igs clpP|psbB clpP-psbB 69653 70146 0 494 LSC 0.002033 1 2 239 263 no 1.000000 2 1.000000 NA 0.995951 58.100000 psbB gene psbB psbB 70147 71673 1 1527 LSC 0.001965 3 0 300 21 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_077 igs psbB|psbT psbB-psbT 71674 71832 0 159 LSC 0.006452 1 4 276 300 no 1.000000 2 1.000000 NA 0.974843 58.600000 psbT gene psbT psbT 71833 71934 1 102 LSC 0.000000 0 0 137 300 no 0.000000 1 0.000000 NA 1.000000 29.000000 IGS_078 igs psbT|psbN psbT-psbN 71935 71999 0 65 LSC 0.000000 0 0 239 261 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 72000 72131 -1 132 LSC 0.000000 0 0 300 129 no 0.000000 1 0.000000 NA 1.000000 28.400000 IGS_079 igs psbN|psbH psbN-psbH 72132 72235 0 104 LSC 0.000000 0 0 300 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 psbH gene psbH psbH 72236 72457 1 222 LSC 0.004505 1 0 300 12 no 1.000000 2 1.000000 NA 1.000000 41.000000 IGS_080 igs psbH|petB psbH-petB 72458 72593 0 136 LSC 0.014706 2 0 196 46 no 1.000000 2 1.000000 NA 1.000000 49.400000 petB gene petB petB 72594 74089 1 1496 LSC 0.003504 5 69 21 131 no 1.000000 2 1.000000 NA 0.953877 51.800000 IGS_081 igs petB|petD petB-petD 74090 74286 0 197 LSC 0.032609 6 13 261 46 yes 1.000000 2 1.000000 NA 0.934010 63.800000 petD gene petD petD 74287 75498 1 1212 LSC 0.006639 8 7 35 92 yes 1.000000 2 1.000000 NA 0.994224 50.700000 IGS_082 igs petD|rpoA petD-rpoA 75499 75690 0 192 LSC 0.015625 3 0 300 87 no 1.000000 2 1.000000 NA 1.000000 53.000000 rpoA gene rpoA rpoA 75691 76677 -1 987 LSC 0.003040 3 0 65 300 no 1.000000 2 1.000000 NA 1.000000 50.400000 IGS_083 igs rpoA|rps11 rpoA-rps11 76678 76746 0 69 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps11 gene rps11 rps11 76747 77163 -1 417 LSC 0.002398 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.300000 IGS_084 igs rps11|rpl36 rps11-rpl36 77164 77277 0 114 LSC 0.000000 0 0 19 300 no 0.000000 1 0.000000 NA 1.000000 20.200000 rpl36 gene rpl36 rpl36 77278 77391 -1 114 LSC 0.000000 0 0 133 266 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_085 igs rpl36|rps8 rpl36-rps8 77392 77869 0 478 LSC 0.008368 4 0 247 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 rps8 gene rps8 rps8 77870 78274 -1 405 LSC 0.000000 0 0 52 117 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_086 igs rps8|rpl14 rps8-rpl14 78275 78492 0 218 LSC 0.004608 1 1 300 300 no 1.000000 2 1.000000 NA 0.995413 55.600000 rpl14 gene rpl14 rpl14 78493 78861 -1 369 LSC 0.000000 0 0 100 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_087 igs rpl14|rpl16 rpl14-rpl16 78862 78983 0 122 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl16 gene rpl16 rpl16 78984 80460 -1 1477 LSC 0.005427 8 3 300 300 no 1.000000 2 1.000000 NA 0.997969 62.100000 IGS_088 igs rpl16|rps3 rpl16-rps3 80461 80654 0 194 LSC 0.000000 0 0 22 187 no 0.000000 1 0.000000 NA 1.000000 20.400000 rps3 gene rps3 rps3 80655 81311 -1 657 LSC 0.003044 2 0 216 34 no 1.000000 2 1.000000 NA 1.000000 48.100000 rpl22 gene rpl22 rpl22 81296 81778 -1 483 LSC 0.010352 5 0 67 143 no 1.000000 2 1.000000 NA 1.000000 52.300000 IGS_090 igs rpl22|rps19 rpl22-rps19 81779 81831 0 53 LSC 0.000000 0 0 30 90 no 0.000000 1 0.000000 NA 1.000000 21.000000 rps19 gene rps19 rps19 81832 82110 -1 279 LSC 0.003584 1 0 83 43 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_091 igs rps19|rpl2 rps19-rpl2 82111 82164 0 54 IRb 0.037037 2 0 188 18 no 1.000000 2 1.000000 NA 1.000000 60.100000 rpl2 gene rpl2 rpl2 82165 83672 -1 1508 IRb 0.000663 1 0 2 300 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 83673 83690 0 18 IRb 0.000000 0 0 300 286 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 83691 83972 -1 282 IRb 0.000000 0 0 300 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_093 igs rpl23|trnI rpl23-trnI 83973 84140 0 168 IRb 0.005952 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.900000 IGS_094 igs trnI|ycf2 trnI-ycf2 84215 84302 0 88 IRb 0.000000 0 0 237 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 84303 91136 1 6834 IRb 0.000146 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_095 igs ycf2|orf77 ycf2-orf77 91137 91264 0 128 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 orf77 gene orf77 orf77 91265 91498 1 234 IRb 0.000000 0 0 300 207 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_096 igs orf77|trnL orf77-trnL 91499 92013 0 515 IRb 0.003883 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.200000 IGS_097 igs trnL|ndhB trnL-ndhB 92095 92703 0 609 IRb 0.000000 0 38 300 300 yes 1.000000 2 1.000000 NA 0.937603 63.200000 ndhB gene ndhB ndhB 92704 94558 -1 1855 IRb 0.001078 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.600000 IGS_098 igs ndhB|rps7 ndhB-rps7 94559 95239 0 681 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 rps7 gene rps7 rps7 95240 95707 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_099 igs rps7|trnV rps7-trnV 95708 98451 0 2744 IRb 0.000365 1 1 300 300 no 1.000000 2 1.000000 NA 0.999636 56.400000 IGS_100 igs trnV|rrn16S trnV-rrn16S 98524 98754 0 231 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16S rRNA rrn16S rrn16S 98755 100245 1 1491 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_101 igs rrn16S|trnI rrn16S-trnI 100246 100468 0 223 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 100469 100505 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 101452 101486 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_104 igs trnI|trnA trnI-trnA 101487 101550 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 101551 101588 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 102389 102423 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_107 igs trnA|rrn23S trnA-rrn23S 102424 102572 0 149 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 102573 105377 1 2805 IRb 0.000713 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_108 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 105378 105475 0 98 IRb 0.000000 0 0 300 252 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 105476 105578 1 103 IRb 0.000000 0 0 300 149 no 0.000000 1 0.000000 NA 1.000000 29.900000 IGS_109 igs rrn4.5S|rrn5s rrn4.5S-rrn5s 105579 105862 0 284 IRb 0.003968 1 32 300 300 no 1.000000 2 1.000000 NA 0.887324 57.800000 rrn5s rRNA rrn5s rrn5s 105863 105983 1 121 IRb 0.000000 0 0 134 300 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_110 igs rrn5s|trnR rrn5s-trnR 105984 106224 0 241 IRb 0.000000 0 0 255 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnR tRNA trnR trnR 106225 106298 1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_111 igs trnR|trnN trnR-trnN 106299 106935 0 637 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnN tRNA trnN trnN 106936 107007 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_112 igs trnN|ycf1 trnN-ycf1 107008 107327 0 320 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 ycf1 gene ycf1 ycf1 107328 108359 1 1032 IRb 0.000000 0 0 300 268 no 0.000000 1 0.000000 NA 1.000000 40.000000 ndhF gene ndhF ndhF 108321 110561 -1 2241 SSC 0.005355 12 0 300 182 no 1.000000 2 1.000000 NA 1.000000 58.900000 IGS_114 igs ndhF|rpl32 ndhF-rpl32 110562 111478 0 917 SSC 0.017897 16 23 17 274 yes 1.000000 2 1.000000 NA 0.974918 57.700000 rpl32 gene rpl32 rpl32 111479 111637 1 159 SSC 0.000000 0 0 127 115 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_115 igs rpl32|trnL rpl32-trnL 111638 112268 0 631 SSC 0.021070 13 14 286 194 yes 1.000000 2 1.000000 NA 0.977813 72.500000 IGS_116 igs trnL|ycf5 trnL-ycf5 112349 112466 0 118 SSC 0.008475 1 0 141 300 no 1.000000 2 1.000000 NA 1.000000 52.900000 ycf5 gene ycf5 ycf5 112467 113453 1 987 SSC 0.005066 5 0 3 78 no 1.000000 2 1.000000 NA 1.000000 46.900000 IGS_117 igs ycf5|ndhD ycf5-ndhD 113454 113660 0 207 SSC 0.019512 4 2 75 3 no 1.000000 2 1.000000 NA 0.990338 49.900000 ndhD gene ndhD ndhD 113661 115181 -1 1521 SSC 0.003945 6 0 46 54 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_118 igs ndhD|psaC ndhD-psaC 115182 115317 0 136 SSC 0.007353 1 0 217 36 no 1.000000 2 1.000000 NA 1.000000 44.400000 psaC gene psaC psaC 115318 115563 -1 246 SSC 0.008130 2 0 81 113 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_119 igs psaC|ndhE psaC-ndhE 115564 115806 0 243 SSC 0.008299 2 2 116 36 no 1.000000 2 1.000000 NA 0.991770 45.800000 ndhE gene ndhE ndhE 115807 116112 -1 306 SSC 0.003268 1 0 22 300 no 1.000000 2 1.000000 NA 1.000000 41.200000 IGS_120 igs ndhE|ndhG ndhE-ndhG 116113 116381 0 269 SSC 0.000000 0 92 269 242 no 1.000000 2 1.000000 NA 0.657993 49.100000 ndhG gene ndhG ndhG 116382 116912 -1 531 SSC 0.011299 6 0 300 249 yes 1.000000 2 1.000000 NA 1.000000 63.800000 IGS_121 igs ndhG|ndhI ndhG-ndhI 116913 117327 0 415 SSC 0.002874 1 67 146 300 no 1.000000 2 1.000000 NA 0.838554 54.100000 ndhI gene ndhI ndhI 117328 117840 -1 513 SSC 0.000000 0 0 165 290 no 0.000000 1 0.000000 NA 1.000000 35.600000 IGS_122 igs ndhI|ndhA ndhI-ndhA 117841 117924 0 84 SSC 0.000000 0 0 300 206 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhA gene ndhA ndhA 117925 120101 -1 2177 SSC 0.003675 8 0 300 160 no 1.000000 2 1.000000 NA 1.000000 56.500000 IGS_123 igs ndhA|ndhH ndhA-ndhH 120102 120102 0 1 SSC 0.000000 0 0 300 159 no 0.000000 1 0.000000 NA 1.000000 30.700000 ndhH gene ndhH ndhH 120103 121284 -1 1182 SSC 0.003384 4 0 300 57 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_124 igs ndhH|rps15 ndhH-rps15 121285 121378 0 94 SSC 0.010638 1 0 164 93 no 1.000000 2 1.000000 NA 1.000000 50.600000 rps15 gene rps15 rps15 121379 121645 -1 267 SSC 0.007491 2 0 36 128 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_125 igs rps15|ycf1 rps15-ycf1 121646 121999 0 354 SSC 0.021021 7 21 143 226 yes 1.000000 2 1.000000 NA 0.940678 65.900000 ycf1 gene ycf1 ycf1 122000 127171 -1 5172 SSC 0.005607 29 0 158 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_126 igs ycf1|trnN ycf1-trnN 127172 127491 0 320 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 trnN tRNA trnN trnN 127492 127563 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_127 igs trnN|trnR trnN-trnR 127564 128200 0 637 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 trnR tRNA trnR trnR 128201 128274 -1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_128 igs trnR|rrn5S trnR-rrn5S 128275 128515 0 241 IRa 0.000000 0 0 300 255 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5S rRNA rrn5S rrn5S 128516 128636 -1 121 IRa 0.000000 0 0 300 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_129 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 128637 128920 0 284 IRa 0.003968 1 32 300 300 no 1.000000 2 1.000000 NA 0.887324 57.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 128921 129023 -1 103 IRa 0.000000 0 0 149 300 no 0.000000 1 0.000000 NA 1.000000 29.900000 IGS_130 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 129024 129121 0 98 IRa 0.000000 0 0 252 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 129122 131926 -1 2805 IRa 0.000713 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_131 igs rrn23S|trnA rrn23S-trnA 131927 132075 0 149 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 132076 132110 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 132911 132948 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_134 igs trnA|trnI trnA-trnI 132949 133012 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 133013 133047 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 133994 134030 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs trnI|rrn16S trnI-rrn16S 134031 134253 0 223 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16S rRNA rrn16S rrn16S 134254 135744 -1 1491 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_138 igs rrn16S|trnV rrn16S-trnV 135745 135975 0 231 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs trnV|rps12 trnV-rps12 136048 137943 0 1896 IRa 0.000528 1 1 300 300 no 1.000000 2 1.000000 NA 0.999473 58.300000 rps12_part2 gene rps12 rps12 137944 138738 1 795 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_140 igs rps12|rps7 rps12-rps7 138739 138791 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 138792 139259 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_141 igs rps7|ndhB rps7-ndhB 139260 139940 0 681 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 ndhB gene ndhB ndhB 139941 141795 1 1855 IRa 0.001078 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.600000 IGS_142 igs ndhB|trnL ndhB-trnL 141796 142404 0 609 IRa 0.000000 0 38 300 300 no 1.000000 2 1.000000 NA 0.937603 63.200000 IGS_143 igs trnL|orf77 trnL-orf77 142486 143000 0 515 IRa 0.003883 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.200000 orf77 gene orf77 orf77 143001 143234 -1 234 IRa 0.000000 0 0 207 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_144 igs orf77|ycf2 orf77-ycf2 143235 143362 0 128 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 143363 150196 -1 6834 IRa 0.000146 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_145 igs ycf2|trnI ycf2-trnI 150197 150284 0 88 IRa 0.000000 0 0 300 237 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_146 igs trnI|rpl23 trnI-rpl23 150359 150526 0 168 IRa 0.005952 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.900000 rpl23 gene rpl23 rpl23 150527 150808 1 282 IRa 0.000000 0 0 4 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_147 igs rpl23|rpl2 rpl23-rpl2 150809 150826 0 18 IRa 0.000000 0 0 286 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 150827 152334 1 1508 IRa 0.000663 1 0 300 2 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_148 igs rpl2|trnH rpl2-trnH 152335 3 0 170 IRa 0.011765 2 0 18 96 no 1.000000 2 1.000000 NA 1.000000 45.600000