primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score matK-trnK-UUU_p1 matK-trnK-UUU 1 AGTTCTATATGTCTTTGGAATTCT GGTAGAGTACTCGGCTTTTA 24 20 29.2 45.0 53.5 53.9 5.2 17.1 12.571138 3029 3762 751-784 1.000000 52.0 matK-trnK-UUU_p2 matK-trnK-UUU 2 AGTTCTATATGTCTTTGGAATTCTTC GGTAGAGTACTCGGCTTTTA 26 20 30.8 45.0 55.4 53.9 5.2 17.1 12.703380 3029 3762 751-784 1.000000 52.0 matK-trnK-UUU_p3 matK-trnK-UUU 3 AGTTCTATATGTCTTTGGAATTCT GGTAGAGTACTCGGCTTTTAA 24 21 29.2 42.9 53.5 54.8 5.2 17.1 12.708588 3029 3762 751-784 1.000000 52.0 matK-trnK-UUU_p4 matK-trnK-UUU 4 AGTTCTATATGTCTTTGGAATTCTT GGTAGAGTACTCGGCTTTTA 25 20 28.0 45.0 54.3 53.9 5.2 17.1 12.806293 3029 3762 751-784 1.000000 52.0 matK-trnK-UUU_p5 matK-trnK-UUU 5 AGTTCTATATGTCTTTGGAATTCTTC GGTAGAGTACTCGGCTTTTAA 26 21 30.8 42.9 55.4 54.8 5.2 17.1 12.840830 3029 3762 751-784 1.000000 52.0 rps16_p1 rps16 1 CCATTGAGTTAGCAACCCGA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.184051 4433 5558 2269-2454 0.900000 86.5 rps16_p2 rps16 2 CCATTGAGTTAGCAACCCGA TGGGCTGAAATTGACGAACA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.133685 4433 5558 2383-2568 0.800000 82.9 rps16_p3 rps16 3 CCATTGAGTTAGCAACCCGA ATAGCAATTTAGGTGGGGCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.126693 4433 5558 2330-2515 0.700000 79.0 rps16_p4 rps16 4 ACCATTGAGTTAGCAACCCG ATAGCAATTTAGGTGGGGCG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.197527 4433 5558 2331-2516 0.700000 78.4 rps16_p5 rps16 5 CCATTGAGTTAGCAACCCGA GAATCCTTCCGTCCCAGAAC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.133539 4433 5558 2262-2367 0.500000 70.9 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5559 6027 487-682 1.000000 90.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5559 6027 498-693 1.000000 89.8 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TAAGGCATCGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.2 8.1 0.0 0.310345 5559 6027 572-712 0.900000 85.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TCATGTCCTTCAAGTCGCAC TAAGGCATCGGGTTTTGGTC 20 20 50.0 50.0 58.2 58.2 0.0 0.0 0.375253 5559 6027 583-723 0.900000 85.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GTAAGGCATCGGGTTTTGGT 20 20 45.0 50.0 58.1 58.5 8.1 0.0 0.597945 5559 6027 573-713 0.900000 83.2 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CTTTCGTCCACTCAGCCATC ACGAATCACACTTTTACCACT 20 21 55.0 38.1 58.6 55.5 0.0 0.0 4.172099 7429 8178 809-966 1.000000 58.6 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CTTTCGTCCACTCAGCCATC AGAACGAATCACACTTTTACCAC 20 23 55.0 39.1 58.6 57.3 0.0 0.0 4.304815 7429 8178 812-969 1.000000 57.6 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CTTTCGTCCACTCAGCCATC GAACGAATCACACTTTTACCACT 20 23 55.0 39.1 58.6 57.3 0.0 0.0 4.304815 7429 8178 811-968 1.000000 57.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CTTTCGTCCACTCAGCCATC AACGAATCACACTTTTACCACT 20 22 55.0 36.4 58.6 56.2 0.0 0.0 4.412570 7429 8178 810-967 1.000000 56.7 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 TTTCGTCCACTCAGCCATCT ACGAATCACACTTTTACCACT 20 21 50.0 38.1 59.0 55.5 0.0 0.0 4.559202 7429 8178 808-965 1.000000 55.5 atpH-atpI_p1 atpH-atpI 1 GCCAGTGAACGAAGAAAACG GGGGCACTTTTACCTTGGAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.022654 12828 13561 1837-1879 0.900000 87.8 atpH-atpI_p2 atpH-atpI 2 GCCAGTGAACGAAGAAAACG TTGGTCAGGGGCACTTTTAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.029011 12828 13561 1844-1886 0.900000 87.8 atpH-atpI_p3 atpH-atpI 3 ATAACGGAAGCGGCAGAAAT GGGGCACTTTTACCTTGGAA 20 20 45.0 50.0 58.0 58.0 1.4 0.0 0.042324 12828 13561 1137-1178 0.900000 87.7 atpH-atpI_p4 atpH-atpI 4 CCAGTGAACGAAGAAAACGC GGGGCACTTTTACCTTGGAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.022654 12828 13561 1836-1878 0.800000 83.6 atpH-atpI_p5 atpH-atpI 5 CCAGTGAACGAAGAAAACGC TTGGTCAGGGGCACTTTTAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.029011 12828 13561 1843-1885 0.800000 83.5 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 26864 27355 571-622 1.000000 88.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG GCCCAAGCGAGACTTACAAT 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.343061 26864 27355 509-558 0.900000 85.3 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG ATTAAAGCAGCCCAAGCGAG 20 20 50.0 50.0 58.1 58.9 0.0 0.0 0.984078 26864 27355 518-569 1.000000 84.1 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTTCCCCAGTTCAAATCCGG GACTACCATTAAAGCAGCCCA 20 21 50.0 47.6 58.1 58.0 0.0 0.0 1.082797 26864 27355 525-576 1.000000 83.3 trnC-GCA-petN_p5 trnC-GCA-petN 5 CCAGTTCAAATCCGGGTGTC GCCCAAGCGAGACTTACAAT 20 20 55.0 50.0 58.8 58.3 0.0 0.0 1.095664 26864 27355 504-553 0.900000 79.2 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 CTAGCCTGCTCGTTTCAGTT GTCTTCCCGAAATGGCTGAT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.130177 28166 28878 1404-1425 0.400000 62.8 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 TCGAGCATCTATCCACCAGT GTCTTCCCGAAATGGCTGAT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.117375 28166 28878 1819-1886 0.300000 58.4 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 TCGAGCATCTATCCACCAGT TTCCCGAAATGGCTGATACG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.125148 28166 28878 1816-1883 0.300000 58.3 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 CTAGCCTGCTCGTTTCAGTT TTCCCGAAATGGCTGATACG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.137950 28166 28878 1410-1422 0.300000 57.9 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 TCGAGCATCTATCCACCAGT GATTCTTCCTGGGTTGGGTC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.203524 28166 28878 1958-1958 0.200000 46.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG AGCCAATTAAGTCCGTAGCG 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.196808 45169 45761 666-765 1.000000 90.4 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT AGCCAATTAAGTCCGTAGCG 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.304561 45169 45761 698-797 1.000000 89.6 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 45169 45761 654-753 1.000000 89.0 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GCCAATTAAGTCCGTAGCGT 20 20 55.0 50.0 57.9 58.4 0.0 0.0 0.484236 45169 45761 665-764 1.000000 88.1 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 45169 45761 686-785 1.000000 88.1 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGAAATACAAGATGCTTTTTGA 20 22 50.0 27.3 58.1 52.6 0.0 9.5 7.474357 46724 47435 704-768 0.800000 44.0 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA TCCCAATTTTTATGAAATACAAGATGC 20 27 50.0 29.6 58.1 57.4 0.0 0.0 7.650413 46724 47435 739-780 0.800000 44.0 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA CCCAATTTTTATGAAATACAAGATGCT 20 27 50.0 29.6 58.1 57.4 0.0 0.0 7.655817 46724 47435 738-779 0.800000 44.0 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA ATGAAATACAAGATGCTTTTTGA 20 23 50.0 26.1 58.1 53.2 0.0 9.5 7.831993 46724 47435 705-769 0.800000 44.0 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CCTCGTGTCACCAGTTCAAA CCCAATTTTTATGAAATACAAGATGC 20 26 50.0 30.8 58.1 56.2 0.0 0.0 7.848636 46724 47435 738-779 0.800000 44.0 petA-psbJ_p1 petA-psbJ 1 CAAGCCGTCCTTCCAGATAC TGCGGGTTGGTTATTTGTCA 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.076015 58820 59668 2295-2393 0.800000 82.4 petA-psbJ_p2 petA-psbJ 2 GGCGGCCGGTATAGTAAAAA ACACAATCAAACCCGAACGA 20 20 50.0 45.0 58.0 58.0 29.4 0.0 0.091511 58820 59668 1567-1599 0.300000 55.3 petA-psbJ_p3 petA-psbJ 3 GGCGGCCGGTATAGTAAAAA ACGACACAATCAAACCCGAA 20 20 50.0 45.0 58.0 58.0 29.4 0.0 0.091511 58820 59668 1570-1602 0.300000 55.3 petA-psbJ_p4 petA-psbJ 4 GGCGGCCGGTATAGTAAAAA TGCGGGTTGGTTATTTGTCA 20 20 50.0 45.0 58.0 58.0 29.4 0.0 0.065147 58820 59668 1882-1914 0.300000 55.1 petA-psbJ_p5 petA-psbJ 5 GGCGGCCGGTATAGTAAAAA GAGCCGACAAGGAATTCCAT 20 20 50.0 50.0 58.0 58.0 29.4 26.2 0.091930 58820 59668 1804-1836 0.300000 54.9 psbE-petL_p1 psbE-petL 1 TGACAAATAACCAACCCGCA AAATAACTAGTTAGAGTAGGCAT 20 23 45.0 30.4 58.0 52.4 0.0 19.6 8.610226 60492 61348 930-1278 1.000000 52.0 psbE-petL_p2 psbE-petL 2 CAACCCGCAATGAATAGGGA AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.9 52.4 6.4 19.6 8.644221 60492 61348 919-1267 1.000000 52.0 psbE-petL_p3 psbE-petL 3 AGAACGTTCTCCTGTGCTTC AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.8 52.4 24.9 19.6 8.749230 60492 61348 842-1190 1.000000 52.0 psbE-petL_p4 psbE-petL 4 GTTCTCCTGTGCTTCCAGAC AAATAACTAGTTAGAGTAGGCAT 20 23 55.0 30.4 58.2 52.4 0.9 19.6 8.790818 60492 61348 837-1185 1.000000 52.0 psbE-petL_p5 psbE-petL 5 AACCCGCAATGAATAGGGAC AAATAACTAGTTAGAGTAGGCAT 20 23 50.0 30.4 57.9 52.4 6.4 19.6 8.645669 60492 61348 918-1009 0.900000 48.0 trnN-GUU-ndhF_p1 trnN-GUU-ndhF 1 CACATTCTGGTGTCCTAGGC AAACGGGTTTGGTGCTGTAA 20 20 55.0 45.0 58.0 58.2 3.0 0.0 0.264608 101727 103964 2923-2923 0.200000 46.0 trnN-GUU-ndhF_p2 trnN-GUU-ndhF 2 GGTGACGATACTGTAGGGGA AAACGGGTTTGGTGCTGTAA 20 20 55.0 45.0 57.9 58.2 0.0 0.0 0.297741 101727 103964 2852-2852 0.200000 45.7 trnN-GUU-ndhF_p3 trnN-GUU-ndhF 3 ACGCCAGAAAGGTTCCTTTT AAACGGGTTTGGTGCTGTAA 20 20 45.0 45.0 57.9 58.2 16.5 0.0 0.302136 101727 103964 2810-2810 0.200000 45.7 trnN-GUU-ndhF_p4 trnN-GUU-ndhF 4 GAACTTGGGTGTGGGTCTTT AAACGGGTTTGGTGCTGTAA 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.302136 101727 103964 2601-2601 0.200000 45.7 trnN-GUU-ndhF_p5 trnN-GUU-ndhF 5 AATAGCTCGACGCCAGAAAG AAACGGGTTTGGTGCTGTAA 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.306875 101727 103964 2819-2819 0.200000 45.6 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGGCAGCGTTAAAAGCTTTT CTCGCACTGCTTCCTAAGAG 20 20 45.0 55.0 57.9 58.1 26.5 0.0 0.228997 107226 107922 824-966 0.800000 82.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGGCAGCGTTAAAAGCTTTT CTCTCGCACTGCTTCCTAAG 20 20 45.0 55.0 57.9 58.1 26.5 0.0 0.228997 107226 107922 826-968 0.800000 82.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGGCAGCGTTAAAAGCTTTT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 57.9 57.9 26.5 0.0 0.273193 107226 107922 813-955 0.800000 81.8 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGGCAGCGTTAAAAGCTTTT AACCATTGGGATTGGAGAGC 20 20 45.0 50.0 57.9 57.9 26.5 7.8 0.298889 107226 107922 1406-1538 0.800000 81.6 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGGCAGCGTTAAAAGCTTTT CCGACGTAGCAAATCCTTGA 20 20 45.0 50.0 57.9 58.0 26.5 0.0 0.153498 107226 107922 1359-1473 0.400000 66.7 ycf1_p1 ycf1 1 CTGGTGGCTTCTCTTCTTCC GTGCCACGTTAGCCAGATTA 20 20 55.0 50.0 57.9 58.0 0.0 4.9 0.125019 122769 122888 1047-1095 0.200000 51.4 ycf1_p2 ycf1 2 CTGGTGGCTTCTCTTCTTCC TTTTCCCAAGTGCCACGTTA 20 20 55.0 45.0 57.9 57.9 0.0 0.0 0.160709 122769 122888 1056-1104 0.200000 51.1 ycf1_p3 ycf1 3 GCTTAGCAACTGGTGGCTTA GTGCCACGTTAGCCAGATTA 20 20 50.0 50.0 58.2 58.0 8.0 4.9 0.197325 122769 122888 1209-1257 0.200000 50.2 ycf1_p4 ycf1 4 CTGGTGGCTTCTCTTCTTCC GAGCTACTGAGGAACAACGG 20 20 55.0 55.0 57.9 58.0 0.0 0.0 0.108808 122769 122888 1919-1967 0.200000 49.6 ycf1_p5 ycf1 5 TTACCGCCTTTTCGAATCGA GAACAAGATAAGCCTGCGGA 20 20 45.0 50.0 57.6 58.0 0.0 0.0 0.391206 122163 122312 415-415 0.200000 45.1