primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCTACCGATGGTATGGACGA AACAAGGCGCTCAACCTAC 20 19 50.0 52.6 57.4 58.1 0.0 7.6 1.715579 4465 5343 1065-1075 1.000000 67.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TCTACCGATGGTATGGACGA GAACAAGGCGCTCAACCTAC 20 20 50.0 55.0 57.4 59.2 0.0 7.6 1.847068 4465 5343 1066-1076 1.000000 66.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCTACCGATGGTATGGACGA GAACAAGGCGCTCAACCTA 20 19 50.0 52.6 57.4 57.8 0.0 7.6 1.870879 4465 5343 1066-1076 1.000000 66.3 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCGATGGTATGGACGAATCA AACAAGGCGCTCAACCTAC 20 19 50.0 52.6 57.2 58.1 0.0 7.6 1.883942 4465 5343 1061-1071 1.000000 66.2 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 ACCGATGGTATGGACGAATC AACAAGGCGCTCAACCTAC 20 19 50.0 52.6 57.2 58.1 0.0 7.6 1.885864 4465 5343 1062-1072 1.000000 66.2 trnS-GCU-trnT-CGU_p1 trnS-GCU-trnT-CGU 1 CAATCCGACGCTTTAGTCCA GGGGTCCATAGAACGAATCG 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.154980 8546 9165 703-713 1.000000 79.1 trnS-GCU-trnT-CGU_p2 trnS-GCU-trnT-CGU 2 AATCCGACGCTTTAGTCCAC GGGGTCCATAGAACGAATCG 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.156368 8546 9165 702-712 1.000000 79.1 trnS-GCU-trnT-CGU_p3 trnS-GCU-trnT-CGU 3 CAATCCGACGCTTTAGTCCA GGTCCATAGAACGAATCGCA 20 20 50.0 50.0 58.0 57.8 0.0 1.2 0.223536 8546 9165 701-711 1.000000 78.6 trnS-GCU-trnT-CGU_p4 trnS-GCU-trnT-CGU 4 AATCCGACGCTTTAGTCCAC GGTCCATAGAACGAATCGCA 20 20 50.0 50.0 58.0 57.8 0.0 1.2 0.224924 8546 9165 700-710 1.000000 78.5 trnS-GCU-trnT-CGU_p5 trnS-GCU-trnT-CGU 5 ACGGAAAGAGAGGGATTCGA GGGGTCCATAGAACGAATCG 20 20 50.0 55.0 58.2 57.8 0.0 0.0 0.301746 8546 9165 756-766 1.000000 77.9 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT ACAAGCGGTATTCAAGCTCT 20 20 45.0 45.0 58.0 57.2 1.4 0.0 0.808551 14274 15647 1465-1485 1.000000 74.8 atpH-atpI_p2 atpH-atpI 2 GATCCCTTCTACAGCTTGCC ACAAGCGGTATTCAAGCTCT 20 20 55.0 45.0 58.0 57.2 0.0 0.0 0.809747 14274 15647 1550-1570 1.000000 74.7 atpH-atpI_p3 atpH-atpI 3 AATAACGGAAGCGGCAGAAA ACAAGCGGTATTCAAGCTCT 20 20 45.0 45.0 58.2 57.2 1.4 0.0 0.954089 14274 15647 1466-1486 1.000000 73.6 atpH-atpI_p4 atpH-atpI 4 ATAACGGAAGCGGCAGAAAT TAGGTGAATCCATGGAAGGC 20 20 45.0 50.0 58.0 57.0 1.4 20.7 1.068024 14274 15647 1416-1436 1.000000 72.7 atpH-atpI_p5 atpH-atpI 5 GATCCCTTCTACAGCTTGCC TAGGTGAATCCATGGAAGGC 20 20 55.0 50.0 58.0 57.0 0.0 20.7 1.069221 14274 15647 1501-1521 1.000000 72.7 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTTGTATCGTTTTGGCGGC TTAAAGCAGCCCAAGCAAGA 20 20 45.0 45.0 57.9 58.0 0.0 0.0 0.059326 29283 30499 1314-1336 1.000000 81.0 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.088172 29283 30499 1258-1280 1.000000 80.9 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTTGTATCGTTTTGGCGGC CAGCCCAAGCAAGACTTACT 20 20 45.0 50.0 57.9 57.8 0.0 0.0 0.244410 29283 30499 1308-1330 1.000000 79.6 trnC-GCA-petN_p4 trnC-GCA-petN 4 TTTCCCCAGTTCAAATCCGG CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.273256 29283 30499 1252-1274 1.000000 79.4 trnC-GCA-petN_p5 trnC-GCA-petN 5 GGGGGACTGCAAATCCTTTT TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.4 58.0 14.7 0.0 0.361535 29283 30499 1276-1298 1.000000 78.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG CACAAAAACGAAACGGTCCC 20 20 55.0 50.0 58.1 58.2 7.6 0.0 0.233981 34002 35486 1635-1636 1.000000 78.3 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GTGGTAGAGTAACGCCATGG CCACAAAAACGAAACGGTCC 20 20 55.0 50.0 58.1 58.2 7.6 0.0 0.233981 34002 35486 1636-1637 1.000000 78.3 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG CCCACAAAAACGAAACGGTC 20 20 55.0 50.0 58.1 58.2 7.6 0.0 0.233981 34002 35486 1637-1638 1.000000 78.3 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 TCAGTGGTAGAGTAACGCCA CACAAAAACGAAACGGTCCC 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.256136 34002 35486 1638-1639 1.000000 78.1 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA CCACAAAAACGAAACGGTCC 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.256136 34002 35486 1639-1640 1.000000 78.1 atpB-rbcL_p1 atpB-rbcL 1 CCTGGGGGAAAAGCTACATC AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 0.0 0.0 0.199291 57328 58080 938-938 1.000000 78.6 atpB-rbcL_p2 atpB-rbcL 2 CTGGGGGAAAAGCTACATCC AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 4.2 0.0 0.199291 57328 58080 937-937 1.000000 78.6 atpB-rbcL_p3 atpB-rbcL 3 GGGGGAAAAGCTACATCCAG AACACCAGCTTTGAACCCAA 20 20 55.0 45.0 57.9 58.1 12.8 0.0 0.199291 57328 58080 935-935 1.000000 78.6 atpB-rbcL_p4 atpB-rbcL 4 AAGCTACATCCAGTACCGGA AACACCAGCTTTGAACCCAA 20 20 50.0 45.0 57.8 58.1 9.5 0.0 0.295265 57328 58080 928-928 1.000000 77.8 atpB-rbcL_p5 atpB-rbcL 5 ATTTGAGCGATACGTCCCAG AACACCAGCTTTGAACCCAA 20 20 50.0 45.0 57.8 58.1 0.0 0.0 0.365766 57328 58080 902-902 1.000000 77.3 rbcL-accD_p1 rbcL-accD 1 AGTCCTGAATTAGCTGCTGC CGGGTCTTCACTTACACTGG 20 20 50.0 55.0 58.0 57.9 13.4 0.0 0.115816 59530 60500 1155-1170 1.000000 80.3 rbcL-accD_p2 rbcL-accD 2 CTGCCAAATGGAGTCCTGAA CGGGTCTTCACTTACACTGG 20 20 50.0 55.0 57.8 57.9 11.3 0.0 0.285308 59530 60500 1166-1181 1.000000 78.9 rbcL-accD_p3 rbcL-accD 3 GCTGCTGCTTGTGAAGTATG CGGGTCTTCACTTACACTGG 20 20 50.0 55.0 57.5 57.9 8.5 0.0 0.619632 59530 60500 1143-1158 1.000000 76.3 rbcL-accD_p4 rbcL-accD 4 AGTCCTGAATTAGCTGCTGC ACCCACGCCTGTATTCTAAC 20 20 50.0 50.0 58.0 57.3 13.4 0.0 0.721380 59530 60500 1096-1111 1.000000 75.5 rbcL-accD_p5 rbcL-accD 5 CTTGCTCGTGAGGGTAATGA CGGGTCTTCACTTACACTGG 20 20 50.0 55.0 57.3 57.9 0.0 0.0 0.753247 59530 60500 1200-1215 1.000000 75.2 psbE-petL_p1 psbE-petL 1 TGACAAATAACCAACCCGCA GCCGCTAGTAGAAAACCGAA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.017769 68104 69476 1507-1529 1.000000 81.1 psbE-petL_p2 psbE-petL 2 TGACAAATAACCAACCCGCA AAGCCGCTAGTAGAAAACCG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.023310 68104 69476 1509-1531 1.000000 81.1 psbE-petL_p3 psbE-petL 3 CAACCCGCAATGAATAGGGA GCCGCTAGTAGAAAACCGAA 20 20 50.0 50.0 57.9 58.0 6.4 0.0 0.051764 68104 69476 1496-1518 1.000000 80.9 psbE-petL_p4 psbE-petL 4 CAACCCGCAATGAATAGGGA AAGCCGCTAGTAGAAAACCG 20 20 50.0 50.0 57.9 58.0 6.4 0.0 0.057305 68104 69476 1498-1520 1.000000 80.8 psbE-petL_p5 psbE-petL 5 AGAACGTTCTCCTGTGCTTC GCCGCTAGTAGAAAACCGAA 20 20 50.0 50.0 57.8 58.0 24.9 0.0 0.156772 68104 69476 1419-1441 1.000000 80.1 trnP-GGG-psaJ_p1 trnP-GGG-psaJ 1 ACCCGTGACATTTTGTACCC AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.269767 70328 71070 838-861 1.000000 80.6 trnP-GGG-psaJ_p2 trnP-GGG-psaJ 2 CCCGTGACATTTTGTACCCA AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.271110 70328 71070 837-860 1.000000 80.6 trnP-GGG-psaJ_p3 trnP-GGG-psaJ 3 ACAGGATTTGAACCCGTGAC AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.277803 70328 71070 849-872 1.000000 80.5 trnP-GGG-psaJ_p4 trnP-GGG-psaJ 4 CAGGATTTGAACCCGTGACA AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.279136 70328 71070 848-871 1.000000 80.5 trnP-GGG-psaJ_p5 trnP-GGG-psaJ 5 TGACAGGATTTGAACCCGTG AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.279136 70328 71070 851-874 1.000000 80.5 clpP_p1 clpP 1 TATTTGCGCGGAATTCTTGC ACCGATTGTTACGTTTCCACA 20 21 45.0 42.9 57.8 58.2 15.5 0.0 1.351089 74155 76182 2116-2118 1.000000 69.5 clpP_p2 clpP 2 CGTGTATTTGCGCGGAATTC ACCGATTGTTACGTTTCCACA 20 21 50.0 42.9 58.5 58.2 15.5 0.0 1.711021 74155 76182 2120-2122 1.000000 66.6 clpP_p3 clpP 3 TATTTGCGCGGAATTCTTGC CCGATTGTTACGTTTCCACA 20 20 45.0 45.0 57.8 56.4 15.5 0.0 1.803256 74155 76182 2115-2117 1.000000 65.8 clpP_p4 clpP 4 TATTTGCGCGGAATTCTTGC ACCGATTGTTACGTTTCCAC 20 20 45.0 45.0 57.8 56.4 15.5 0.0 1.805661 74155 76182 2116-2118 1.000000 65.8 clpP_p5 clpP 5 ATCGTGTATTTGCGCGGAAT ACCGATTGTTACGTTTCCACA 20 21 45.0 42.9 58.7 58.2 15.5 0.0 1.867946 74155 76182 2122-2124 1.000000 65.3 rps11-rpl36_p1 rps11-rpl36 1 ATTTTACGCGCATGCTTACG CGGGGGCGAATTATAGTAAT 20 20 45.0 45.0 57.9 54.8 17.1 0.0 3.303687 83601 84112 643-643 1.000000 53.7 rps11-rpl36_p2 rps11-rpl36 2 ATTTTACGCGCATGCTTACG CGGGGGCGAATTATAGTAATTTG 20 23 45.0 43.5 57.9 57.7 17.1 5.6 3.376826 83601 84112 643-643 1.000000 53.1 rps11-rpl36_p3 rps11-rpl36 3 TTGGTATTTTACGCGCATGC CGGGGGCGAATTATAGTAAT 20 20 45.0 45.0 57.8 54.8 5.7 0.0 3.399580 83601 84112 648-648 1.000000 52.9 rps11-rpl36_p4 rps11-rpl36 4 CCCTTTGGTATTTTACGCGC CGGGGGCGAATTATAGTAAT 20 20 50.0 45.0 57.8 54.8 5.7 0.0 3.401059 83601 84112 652-652 1.000000 52.9 rps11-rpl36_p5 rps11-rpl36 5 TTGGTATTTTACGCGCATGC CGGGGGCGAATTATAGTAATTTG 20 23 45.0 43.5 57.8 57.7 5.7 5.6 3.472719 83601 84112 648-648 1.000000 52.3 rpl16_p1 rpl16 1 AGACCTCTTTCCTTTGGTTCT TCATTTGATATTGATCTAATTGCT 21 24 42.9 25.0 56.5 52.6 0.0 0.0 11.912995 85859 87392 1582-1584 1.000000 40.1 rpl16_p2 rpl16 2 AAGACCTCTTTCCTTTGGTTCT TCATTTGATATTGATCTAATTGCT 22 24 40.9 25.0 57.2 52.6 0.0 0.0 12.181317 85859 87392 1583-1585 1.000000 40.1 rpl16_p3 rpl16 3 CCTAAAGACCTCTTTCCTTTGGT TCATTTGATATTGATCTAATTGCT 23 24 43.5 25.0 58.0 52.6 3.5 0.0 12.396623 85859 87392 1587-1589 1.000000 40.1 rpl16_p4 rpl16 4 AGACCTCTTTCCTTTGGTTC TCATTTGATATTGATCTAATTGCT 20 24 45.0 25.0 54.9 52.6 0.0 0.0 12.511529 85859 87392 1582-1584 1.000000 40.1 rpl16_p5 rpl16 5 GACCTCTTTCCTTTGGTTCT TCATTTGATATTGATCTAATTGCT 20 24 45.0 25.0 54.9 52.6 0.0 0.0 12.511529 85859 87392 1581-1583 1.000000 40.1 trnV-GAC-rrn16S_p1 trnV-GAC-rrn16S 1 AAGGGGTATAACTCAGCGGT CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 58.1 57.5 0.0 5.6 0.647348 105209 105430 318-318 1.000000 77.3 trnV-GAC-rrn16S_p2 trnV-GAC-rrn16S 2 TTGACGTGGTGGAAGTCATC CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 57.8 57.5 0.0 5.6 0.686654 105209 105430 287-287 1.000000 77.3 trnV-GAC-rrn16S_p3 trnV-GAC-rrn16S 3 CGTGGTGGAAGTCATCAGTT CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 57.8 57.5 0.0 5.6 0.692668 105209 105430 283-283 1.000000 77.3 trnV-GAC-rrn16S_p4 trnV-GAC-rrn16S 4 CTTGACGTGGTGGAAGTCAT CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 57.8 57.5 0.0 5.6 0.692668 105209 105430 288-288 1.000000 77.2 trnV-GAC-rrn16S_p5 trnV-GAC-rrn16S 5 TCTATTTCTCGATGGGGGCA CCAGGATCGAACTCTCCATG 20 20 50.0 55.0 58.2 57.5 0.0 5.6 0.721593 105209 105430 342-342 1.000000 76.6 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG TACTTTGTTCGTTGGTGCCA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.042149 113992 114348 1431-1436 1.000000 80.2 ycf1_p2 ycf1 2 CGGGAGAATTGATGACTGCA TACTTTGTTCGTTGGTGCCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.068238 113992 114348 1773-1778 1.000000 79.9 ycf1_p3 ycf1 3 CAATTCCCGTTCTCAACCCA TACTTTGTTCGTTGGTGCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.135531 113992 114348 1390-1395 1.000000 79.4 ycf1_p4 ycf1 4 CGTTCTCAACCCATGACCAA TACTTTGTTCGTTGGTGCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.148942 113992 114348 1383-1388 1.000000 79.3 ycf1_p5 ycf1 5 GCCTCTCGGGAGAATTGATG TACTTTGTTCGTTGGTGCCA 20 20 55.0 45.0 58.1 58.0 15.7 0.0 0.163496 113992 114348 1779-1784 1.000000 79.1 ndhA_p1 ndhA 1 ACCCAGTTACCATAAGGAACA TGGGAGAAGTTGATCGTTGA 21 20 42.9 45.0 56.3 56.5 0.0 0.0 4.260965 124047 126371 2447-2447 1.000000 46.2 ndhA_p2 ndhA 2 ACCCAGTTACCATAAGGAACA TGGGAGAAGTTGATCGTTGAA 21 21 42.9 42.9 56.3 57.2 0.0 0.0 4.510768 124047 126371 2447-2447 1.000000 44.2 ndhA_p3 ndhA 3 AACCCAGTTACCATAAGGAACA TGGGAGAAGTTGATCGTTGA 22 20 40.9 45.0 57.0 56.5 0.0 0.0 4.517857 124047 126371 2448-2448 1.000000 44.2 ndhA_p4 ndhA 4 TGAACCCAGTTACCATAAGGA TGGGAGAAGTTGATCGTTGA 21 20 42.9 45.0 56.0 56.5 0.0 0.0 4.545014 124047 126371 2450-2450 1.000000 44.0 ndhA_p5 ndhA 5 GAACCCAGTTACCATAAGGAACA TGGGAGAAGTTGATCGTTGA 23 20 43.5 45.0 58.1 56.5 0.0 0.0 4.598821 124047 126371 2449-2449 1.000000 43.5 rps15-ycf1_p1 rps15-ycf1 1 CGATCCCGGGTTTTCTTCTT ATGTGTCCGCGATTGAAAGT 20 20 50.0 45.0 57.9 58.2 22.9 8.2 0.301014 127941 128261 407-411 1.000000 78.4 rps15-ycf1_p2 rps15-ycf1 2 CGATCCCGGGTTTTCTTCTT GTGTCCGCGATTGAAAGTTC 20 20 50.0 50.0 57.9 57.8 22.9 8.2 0.337178 127941 128261 405-409 1.000000 78.1 rps15-ycf1_p3 rps15-ycf1 3 CGATCCCGGGTTTTCTTCTT TGTGTCCGCGATTGAAAGTT 20 20 50.0 45.0 57.9 58.4 22.9 8.2 0.520751 127941 128261 406-410 1.000000 76.6 rps15-ycf1_p4 rps15-ycf1 4 CGATCCCGGGTTTTCTTCTT TCCGCGATTGAAAGTTCGTT 20 20 50.0 45.0 57.9 58.5 22.9 8.2 0.605066 127941 128261 402-406 1.000000 76.0 rps15-ycf1_p5 rps15-ycf1 5 CGATCCCGGGTTTTCTTCTT ACATATGTGTCCGCGATTGA 20 20 50.0 45.0 57.9 57.4 22.9 8.2 0.704548 127941 128261 411-415 1.000000 75.1 rrn16S_p1 rrn16S 1 CAGACGTAGCTCGCTTCTTT CAAGAAGAGGGGTTGATCCG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.045866 140822 142312 2241-2242 1.000000 80.1 rrn16S_p2 rrn16S 2 CAGACGTAGCTCGCTTCTTT CCCGACTCCAAGTTGTTCAA 20 20 50.0 50.0 58.0 58.0 0.0 1.4 0.054234 140822 142312 1953-1953 1.000000 80.1 rrn16S_p3 rrn16S 3 AGGGGCTCCTATCAACTTGT CAAGAAGAGGGGTTGATCCG 20 20 50.0 55.0 58.0 58.0 0.9 0.0 0.057250 140822 142312 2345-2346 1.000000 80.0 rrn16S_p4 rrn16S 4 CAGACGTAGCTCGCTTCTTT TCAGCTTTGTCCACGAACAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047286 140822 142312 1613-1613 0.750000 69.6 rrn16S_p5 rrn16S 5 AGGGGCTCCTATCAACTTGT TCAGCTTTGTCCACGAACAA 20 20 50.0 45.0 58.0 58.0 0.9 0.0 0.058671 140822 142312 1717-1717 0.750000 69.5