primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG ATTGAAGTTCCATCTATAAATGG 20 23 55.0 30.4 58.1 52.3 0.0 0.0 8.841504 100 361 309-334 1.000000 51.2 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA ATTGAAGTTCCATCTATAAATGG 20 23 50.0 30.4 57.9 52.3 0.0 0.0 8.845866 100 361 323-348 1.000000 50.9 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC ATTGAAGTTCCATCTATAAATGG 20 23 50.0 30.4 57.9 52.3 0.0 0.0 8.847373 100 361 322-347 1.000000 50.9 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC ATTGAAGTTCCATCTATAAATGG 20 23 50.0 30.4 57.9 52.3 0.0 0.0 8.847373 100 361 324-349 1.000000 50.9 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 CATCCTGTCTGTAGTTGGGC ATTGAAGTTCCATCTATAAATGG 20 23 55.0 30.4 58.0 52.3 0.0 0.0 8.742423 100 361 380-380 0.125000 5.0 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 ATGATCCAGGGCGTAATCCT CGAGTTATTCGTACCGAGGG 20 20 50.0 55.0 58.3 57.6 0.0 0.0 0.661506 7382 7548 233-253 1.000000 85.8 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 ATGATCCAGGGCGTAATCCT AAGAGGGAGAGATGGCTGAG 20 20 50.0 55.0 58.3 58.2 0.0 0.0 0.473230 7382 7548 286-306 1.000000 85.3 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 ATGATCCAGGGCGTAATCCT CAAGAGGGAGAGATGGCTGA 20 20 50.0 55.0 58.3 58.5 0.0 0.0 0.771484 7382 7548 287-307 1.000000 82.9 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 AATGATCCAGGGCGTAATCC AAGAGGGAGAGATGGCTGAG 20 20 50.0 55.0 57.4 58.2 0.0 0.0 0.776508 7382 7548 287-307 1.000000 82.9 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 ATGATCCAGGGCGTAATCCT GATGGCTGAGTGGACGAAAG 20 20 50.0 55.0 58.3 58.6 0.0 0.0 0.901602 7382 7548 276-296 1.000000 82.2 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CACGGAAAGAGAGGGATTCG GGAATAGTAATCAAACCGGGAGA 20 23 55.0 43.5 58.1 57.7 0.0 6.3 3.358372 7637 8390 927-941 1.000000 61.2 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 ACGGAAAGAGAGGGATTCGA GGAATAGTAATCAAACCGGGAGA 20 23 50.0 43.5 58.2 57.7 0.0 6.3 3.437615 7637 8390 926-940 1.000000 60.6 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CACGGAAAGAGAGGGATTCG ACGAATCACACTTTTACCACT 20 21 55.0 38.1 58.1 55.5 0.0 0.0 3.607948 7637 8390 877-891 1.000000 59.7 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 ACGGAAAGAGAGGGATTCGA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.2 55.5 0.0 0.0 3.687191 7637 8390 876-890 1.000000 59.0 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CACGGAAAGAGAGGGATTCG GAACGAATCACACTTTTACCACT 20 23 55.0 39.1 58.1 57.3 0.0 0.0 3.740663 7637 8390 879-893 1.000000 58.6 petN-psbM_p1 petN-psbM 1 ATTGTAAGTCTCGCTTGGGC GCTACTGCGCTCTTCATTCT 20 20 50.0 50.0 58.3 58.1 0.0 9.7 0.327687 27054 28086 1052-1256 1.000000 84.4 petN-psbM_p2 petN-psbM 2 ATTGTAAGTCTCGCTTGGGC TTGCTACTGCGCTCTTCATT 20 20 50.0 45.0 58.3 57.9 0.0 9.7 0.360075 27054 28086 1054-1258 1.000000 84.1 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT GCTACTGCGCTCTTCATTCT 20 20 50.0 50.0 57.6 58.1 0.0 9.7 0.417616 27054 28086 990-1194 1.000000 83.8 petN-psbM_p4 petN-psbM 4 ATGGGGAAGAAGTGGACTCT TTGCTACTGCGCTCTTCATT 20 20 50.0 45.0 57.6 57.9 0.0 9.7 0.450004 27054 28086 992-1196 1.000000 83.5 petN-psbM_p5 petN-psbM 5 ATTGTAAGTCTCGCTTGGGC ATTGCTACTGCGCTCTTCAT 20 20 50.0 45.0 58.3 57.7 0.0 9.7 0.583289 27054 28086 1055-1259 1.000000 82.3 psaA-ycf3_p1 psaA-ycf3 1 ACGACGTTTTTACGGGATCC TTGGTTGAAGATCACGGGAC 20 20 50.0 50.0 58.3 57.8 1.9 0.0 0.465315 39835 40877 836-1144 1.000000 85.1 psaA-ycf3_p2 psaA-ycf3 2 GACGTTTTTACGGGATCCCT TTGGTTGAAGATCACGGGAC 20 20 50.0 50.0 57.6 57.8 28.4 0.0 0.570528 39835 40877 834-1142 1.000000 84.3 psaA-ycf3_p3 psaA-ycf3 3 CCCATTCCTCAAACGACGTT TTGGTTGAAGATCACGGGAC 20 20 50.0 50.0 58.5 57.8 7.6 0.0 0.659503 39835 40877 848-1156 1.000000 83.5 psaA-ycf3_p4 psaA-ycf3 4 TTTTGACTTCTGGTTCCGGC TTGGTTGAAGATCACGGGAC 20 20 50.0 50.0 58.7 57.8 0.0 0.0 0.864182 39835 40877 803-1111 1.000000 82.1 psaA-ycf3_p5 psaA-ycf3 5 CGACGTTTTTACGGGATCCC TTGGTTGAAGATCACGGGAC 20 20 55.0 50.0 59.0 57.8 22.1 0.0 1.177288 39835 40877 835-1143 1.000000 79.4 ndhK-ndhC_p1 ndhK-ndhC 1 GTGGAAACTCAATGGAATTCA CATGGCGAAAAGGAGCATTG 21 20 38.1 50.0 54.4 58.1 7.9 0.0 4.719783 47886 47926 112-114 1.000000 47.9 ndhK-ndhC_p2 ndhK-ndhC 2 GTGGAAACTCAATGGAATTCA GCGAAAAGGAGCATTGGAAT 21 20 38.1 45.0 54.4 57.1 7.9 0.0 5.584503 47886 47926 108-110 1.000000 45.9 ndhK-ndhC_p3 ndhK-ndhC 3 GTGGAAACTCAATGGAATTCAT CATGGCGAAAAGGAGCATTG 22 20 36.4 50.0 55.0 58.1 7.9 0.0 5.125744 47886 47926 112-114 1.000000 45.7 ndhK-ndhC_p4 ndhK-ndhC 4 TGGAAACTCAATGGAATTCA CATGGCGAAAAGGAGCATTG 20 20 35.0 50.0 52.6 58.1 7.9 0.0 5.446164 47886 47926 111-113 1.000000 45.7 ndhK-ndhC_p5 ndhK-ndhC 5 GTGGAAACTCAATGGAATTCA TATGCATGGCGAAAAGGAGC 21 20 38.1 50.0 54.4 59.0 7.9 10.2 5.612784 47886 47926 116-118 1.000000 45.5 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCCAGAAAATGTCATATTCA AGAAGGTCTACGGTTCGAGT 22 20 36.4 50.0 56.0 57.8 0.0 0.0 4.164383 48290 48670 446-866 1.000000 53.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 AAAATGCCCAGAAAATGTCA AGAAGGTCTACGGTTCGAGT 20 20 35.0 50.0 53.9 57.8 0.0 0.0 4.285551 48290 48670 450-870 1.000000 52.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 AAAAATGCCCAGAAAATGTCA AGAAGGTCTACGGTTCGAGT 21 20 33.3 50.0 54.8 57.8 0.0 0.0 4.407885 48290 48670 451-871 1.000000 51.3 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCCAGAAAATGTCATATTCA GAAGGTCTACGGTTCGAGTC 22 20 36.4 55.0 56.0 57.5 0.0 0.0 4.508155 48290 48670 445-865 1.000000 50.5 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 AAATGCCCAGAAAATGTCAT AGAAGGTCTACGGTTCGAGT 20 20 35.0 50.0 53.7 57.8 0.0 0.0 4.529817 48290 48670 449-869 1.000000 50.3 trnM-CAU-atpE_p1 trnM-CAU-atpE 1 TTGACGTAGGTCTGCCTTTG CTCTCAGACGAGCTAGGACA 20 20 50.0 55.0 57.8 58.0 16.0 0.0 0.195076 49577 49792 911-952 1.000000 83.5 trnM-CAU-atpE_p2 trnM-CAU-atpE 2 TTGACGTAGGTCTGCCTTTG TGCTGAGAAGGGTAGTGACA 20 20 50.0 50.0 57.8 58.0 16.0 0.0 0.173499 49577 49792 1024-1065 1.000000 83.2 trnM-CAU-atpE_p3 trnM-CAU-atpE 3 TTGACGTAGGTCTGCCTTTG TACGCCTTAACGACCAATGG 20 20 50.0 50.0 57.8 58.0 16.0 0.0 0.176755 49577 49792 1112-1153 1.000000 82.9 trnM-CAU-atpE_p4 trnM-CAU-atpE 4 TTGACGTAGGTCTGCCTTTG CCCTATTGCCACAGCTGTAG 20 20 50.0 55.0 57.8 58.0 16.0 21.2 0.204776 49577 49792 1150-1191 1.000000 82.7 trnM-CAU-atpE_p5 trnM-CAU-atpE 5 TTGACGTAGGTCTGCCTTTG AAGAGCGCGAAAAATTGAGC 20 20 50.0 45.0 57.8 58.0 16.0 12.1 0.194715 49577 49792 1491-1532 1.000000 81.9 psaJ-rpl33_p1 psaJ-rpl33 1 ATGCGTTGACATTCCCCTTT ATCTTTCCCCTTAGCCAT 20 18 45.0 44.4 58.1 52.2 0.0 0.0 7.913951 63964 64380 466-473 1.000000 47.3 psaJ-rpl33_p2 psaJ-rpl33 2 TTTTCCCAGATGCGTTGACA ATCTTTCCCCTTAGCCAT 20 18 45.0 44.4 58.0 52.2 0.0 0.0 7.863042 63964 64380 475-482 1.000000 47.2 psaJ-rpl33_p3 psaJ-rpl33 3 TTGGGTCTTTAGCCGGTCTA ATCTTTCCCCTTAGCCAT 20 18 50.0 44.4 58.1 52.2 1.9 0.0 7.895930 63964 64380 514-521 1.000000 46.7 psaJ-rpl33_p4 psaJ-rpl33 4 TGGGTCTTTAGCCGGTCTAT ATCTTTCCCCTTAGCCAT 20 18 50.0 44.4 57.8 52.2 1.9 0.0 8.007319 63964 64380 513-520 1.000000 46.7 psaJ-rpl33_p5 psaJ-rpl33 5 ATGGTTTGGGTCTTTAGCCG ATCTTTCCCCTTAGCCAT 20 18 50.0 44.4 58.2 52.2 0.0 0.0 8.003119 63964 64380 519-526 1.000000 46.6 clpP1-psbB_p1 clpP1-psbB 1 CGCACTATACGTCAACCCAA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.238244 68812 69239 524-546 1.000000 82.8 clpP1-psbB_p2 clpP1-psbB 2 CGCACTATACGTCAACCCAA ACACGATACCAAGGCAAACC 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.470628 68812 69239 527-549 1.000000 80.9 clpP1-psbB_p3 clpP1-psbB 3 CGTCAACCCAAGATGCATCT CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.3 58.2 23.8 0.0 0.494531 68812 69239 515-537 1.000000 80.8 clpP1-psbB_p4 clpP1-psbB 4 CGCACTATACGTCAACCCAA TGAACACGATACCAAGGCAA 20 20 50.0 45.0 58.0 57.4 0.0 0.0 0.553551 68812 69239 530-552 1.000000 80.2 clpP1-psbB_p5 clpP1-psbB 5 CGCACTATACGTCAACCCAA ATGGACAGAAATCAACCGGC 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.537278 68812 69239 573-595 1.000000 80.0 ndhF-rpl32_p1 ndhF-rpl32 1 AGGAATTGGAAGTGTAATGAAGGA AAAAGCTTTTAACGCTGCCC 24 20 37.5 45.0 57.9 57.9 0.0 22.7 4.288594 108391 109098 809-861 1.000000 54.3 ndhF-rpl32_p2 ndhF-rpl32 2 GGAATTGGAAGTGTAATGAAGGA AAAAGCTTTTAACGCTGCCC 23 20 39.1 45.0 56.5 57.9 0.0 22.7 4.642987 108391 109098 808-860 1.000000 51.5 ndhF-rpl32_p3 ndhF-rpl32 3 AGGAATTGGAAGTGTAATGAAGG AAAAGCTTTTAACGCTGCCC 23 20 39.1 45.0 56.5 57.9 0.0 22.7 4.651396 108391 109098 809-861 1.000000 51.4 ndhF-rpl32_p4 ndhF-rpl32 4 AGGAATTGGAAGTGTAATGAAGGA CTGCCCAATACCCCTTCTTT 24 20 37.5 50.0 57.9 57.5 0.0 0.0 4.671928 108391 109098 795-847 1.000000 51.3 ndhF-rpl32_p5 ndhF-rpl32 5 AGGAATTGGAAGTGTAATGAAGGA TTTAACGCTGCCCAATACCC 24 20 37.5 50.0 57.9 58.5 0.0 0.0 4.673884 108391 109098 802-854 1.000000 51.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGGCAGCGTTAAAAGCTTTT AATAGTGAAGATTGCGGCGT 20 20 45.0 45.0 57.9 58.0 26.5 9.4 0.173091 109273 109811 1195-1344 1.000000 86.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGGCAGCGTTAAAAGCTTTT ATAGTGAAGATTGCGGCGTT 20 20 45.0 45.0 57.9 58.0 26.5 9.4 0.173091 109273 109811 1194-1343 1.000000 86.7 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGGCAGCGTTAAAAGCTTTT GCCTGAAGTAGCAAACCCTT 20 20 45.0 50.0 57.9 58.1 26.5 0.0 0.237858 109273 109811 1163-1312 1.000000 86.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGGCAGCGTTAAAAGCTTTT ATCCGCATAAAAGAGCTGCA 20 20 45.0 45.0 57.9 58.0 26.5 1.0 0.191602 109273 109811 1275-1424 1.000000 86.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGGCAGCGTTAAAAGCTTTT TCCGCATAAAAGAGCTGCAT 20 20 45.0 45.0 57.9 58.0 26.5 1.0 0.191602 109273 109811 1274-1423 1.000000 86.0 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA TGAGTCAAAATATGTTCTAAAGTCGA 20 26 50.0 30.8 57.9 56.9 0.0 0.0 7.175539 109892 109999 181-210 1.000000 48.0 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 GGTAGACACGCTGCTCTTAG TGAGTCAAAATATGTTCTAAAGTCGA 20 26 55.0 30.8 57.8 56.9 0.0 0.0 7.247557 109892 109999 183-212 1.000000 48.0 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 GTAGACACGCTGCTCTTAGG TGAGTCAAAATATGTTCTAAAGTCGA 20 26 55.0 30.8 57.8 56.9 0.0 0.0 7.247557 109892 109999 182-211 1.000000 48.0 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 AAATTGGTAGACACGCTGCT TGAGTCAAAATATGTTCTAAAGTCGA 20 26 45.0 30.8 57.8 56.9 0.0 0.0 7.236266 109892 109999 188-217 1.000000 47.9 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 AATTGGTAGACACGCTGCTC TGAGTCAAAATATGTTCTAAAGTCGA 20 26 50.0 30.8 58.3 56.9 0.0 0.0 7.324408 109892 109999 187-216 1.000000 47.9 ycf1_p1 ycf1 1 TTATTCCTTGTGTTCCGCGA GGCACCGATCAATGCTAAGA 20 20 45.0 50.0 57.5 58.0 8.2 15.6 0.505501 121768 121887 981-984 0.500000 57.2 ycf1_p2 ycf1 2 TTATTCCTTGTGTTCCGCGA AGAGGATTTCGAAGGGTGGA 20 20 45.0 50.0 57.5 58.0 8.2 0.0 0.506439 121768 121887 1124-1127 0.500000 57.0 ycf1_p3 ycf1 3 TTATTCCTTGTGTTCCGCGA CGAGTGGGAAGAGGATTTCG 20 20 45.0 55.0 57.5 58.1 8.2 0.0 0.531165 121768 121887 1133-1136 0.500000 56.8 ycf1_p4 ycf1 4 TTATTCCTTGTGTTCCGCGA AAACCTTGGCACCGATCAAT 20 20 45.0 45.0 57.5 58.1 8.2 0.0 0.535705 121768 121887 988-991 0.375000 51.8 ycf1_p5 ycf1 5 TTATTCCTTGTGTTCCGCGA TTGGCACCGATCAATGCTAA 20 20 45.0 45.0 57.5 57.9 8.2 15.6 0.580352 121768 121887 983-986 0.250000 46.0