Hotspot

trnT-UGU-trnL-UAA

LSC · 48819-50119 · 1301 bp

Back to Stachyphrynium

Pi 0.0588
MarkerSeek score 78.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AGAGAAAAAGCCGGCTATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1350-1402 bp 1.0 87.4
trnT-UGU-trnL-UAA_p2 CGATAGAGAAAAAGCCGGCT ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1354-1406 bp 1.0 87.4
trnT-UGU-trnL-UAA_p3 TCGATAGAGAAAAAGCCGGC ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1355-1407 bp 1.0 87.3
trnT-UGU-trnL-UAA_p4 AGAGAAAAAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1358-1410 bp 1.0 86.8
trnT-UGU-trnL-UAA_p5 CGATAGAGAAAAAGCCGGCT TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1362-1414 bp 1.0 86.8