Hotspot

trnT-UGU-trnL-UAA

LSC · 47924-48866 · 943 bp

Back to Spiraea

Pi 0.0116
MarkerSeek score 65.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 740-1027 bp 1.0 87.6
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 748-1035 bp 1.0 87.0
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 772-1059 bp 1.0 86.6
trnT-UGU-trnL-UAA_p4 ATGGAGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 792-1079 bp 1.0 86.3
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 780-1067 bp 1.0 86.0