feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rbcL gene rbcL rbcL 1 1473 1 1473 Genome 0.023422 74 0 136 11 no 1.000000 5 1.000000 0.023422 1.000000 61.400000 IGS_001 igs rbcL|rbcS rbcL-rbcS 1474 1508 0 35 Genome 0.017143 1 0 5 32 no 0.000000 2 0.000000 0.017143 1.000000 30.400000 rbcS gene rbcS rbcS 1509 1931 1 423 Genome 0.039243 36 0 23 1 no 1.000000 5 1.000000 0.039243 1.000000 68.400000 IGS_002 igs rbcS|psbX rbcS-psbX 1932 2240 0 309 Genome 0.101618 61 5 48 57 no 1.000000 5 1.000000 0.102230 0.993528 78.100000 psbX gene psbX psbX 2241 2357 1 117 Genome 0.027350 6 0 68 6 no 0.400000 3 0.666667 0.027350 1.000000 45.400000 IGS_003 igs psbX|ycf66 psbX-ycf66 2358 2491 0 134 Genome 0.048507 12 0 4 78 no 1.000000 5 1.000000 0.048507 1.000000 70.800000 ycf66 gene ycf66 ycf66 2492 2803 1 312 Genome 0.030449 21 0 58 5 no 1.000000 5 1.000000 0.030449 1.000000 60.200000 IGS_004 igs ycf66|psbV ycf66-psbV 2804 2852 0 49 Genome 0.020408 2 0 8 74 no 0.200000 3 0.333333 0.020408 1.000000 37.400000 psbV gene psbV psbV 2853 3344 1 492 Genome 0.046138 46 0 1 1 no 1.000000 5 1.000000 0.046138 1.000000 74.000000 IGS_005 igs psbV|trnR(ccg) psbV-trnR(ccg) 3345 3454 0 110 Genome 0.086364 19 1 18 97 no 1.000000 5 1.000000 0.086722 1.000000 74.900000 trnR(ccg) tRNA trnR(ccg) trnR(ccg) 3455 3527 1 73 Genome 0.000000 0 0 6 24 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_006 igs trnR(ccg)|ssra trnR(ccg)-ssra 3528 3580 0 53 Genome 0.030189 4 0 79 29 no 0.400000 3 0.666667 0.030189 1.000000 51.400000 ssra gene ssra ssra 3581 3922 1 342 Genome 0.032164 25 0 9 54 no 1.000000 5 1.000000 0.032164 1.000000 62.700000 IGS_007 igs ssra|trnM(cau) ssra-trnM(cau) 3923 3926 0 4 Genome 0.000000 0 0 36 50 no 0.000000 1 0.000000 NA 1.000000 21.400000 trnM(cau) tRNA trnM(cau) trnM(cau) 3927 4011 1 85 Genome 0.004706 1 0 40 5 no 0.200000 2 0.500000 0.004706 1.000000 26.500000 IGS_008 igs trnM(cau)|rpl19 trnM(cau)-rpl19 4012 4096 0 85 Genome 0.027059 5 0 34 8 no 0.400000 3 0.666667 0.027059 1.000000 46.400000 rpl19 gene rpl19 rpl19 4097 4459 1 363 Genome 0.051515 40 0 11 0 no 1.000000 5 1.000000 0.051515 1.000000 73.800000 IGS_009 igs rpl19|petF rpl19-petF 4460 4574 0 115 Genome 0.099130 23 5 24 4 no 1.000000 5 1.000000 0.099407 1.000000 78.000000 petF gene petF petF 4575 4874 1 300 Genome 0.142222 79 3 1 7 yes 1.000000 5 1.000000 0.141744 0.996667 73.700000 IGS_010 igs petF|psaB petF-psaB 4875 5075 0 201 Genome 0.177604 63 51 29 6 no 1.000000 5 1.000000 0.176713 0.945274 75.900000 psaB gene psaB psaB 5076 7277 -1 2202 Genome 0.037466 171 0 0 58 no 1.000000 5 1.000000 0.037466 0.999092 68.800000 IGS_011 igs psaB|psaA psaB-psaA 7278 7405 0 128 Genome 0.078906 20 0 57 75 no 1.000000 5 1.000000 0.078906 1.000000 76.800000 psaA gene psaA psaA 7406 9664 -1 2259 Genome 0.034130 157 0 1 64 no 1.000000 5 1.000000 0.034130 1.000000 66.300000 IGS_012 igs psaA|trnP(ugg) psaA-trnP(ugg) 9665 9868 0 204 Genome 0.074510 32 0 158 79 no 1.000000 5 1.000000 0.074510 1.000000 78.400000 trnP(ugg) tRNA trnP(ugg) trnP(ugg) 9869 9942 -1 74 Genome 0.000000 0 0 1 5 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_013 igs trnP(ugg)|ycf89 trnP(ugg)-ycf89 9943 10278 0 336 Genome 0.130060 83 35 75 18 no 1.000000 5 1.000000 0.121328 0.952381 78.800000 ycf89 gene ycf89 ycf89 10279 11241 1 963 Genome 0.060644 125 0 0 0 no 1.000000 5 1.000000 0.060644 0.998962 78.700000 IGS_014 igs ycf89|rns ycf89-rns 11242 11515 0 274 Genome 0.168248 90 14 15 3 yes 1.000000 5 1.000000 0.168362 1.000000 78.700000 rns rRNA rns rns 11516 13006 1 1491 Genome 0.002951 11 0 13 21 no 0.600000 4 0.750000 0.002951 1.000000 39.500000 IGS_015 igs rns|trnI(gau) rns-trnI(gau) 13007 13064 0 58 Genome 0.027586 3 0 300 163 no 1.000000 5 1.000000 0.027586 1.000000 68.600000 trnI(gau) tRNA trnI(gau) trnI(gau) 13065 13138 1 74 Genome 0.000000 0 0 21 89 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_016 igs trnI(gau)|trnA(ugc) trnI(gau)-trnA(ugc) 13139 13140 0 2 Genome 0.000000 0 0 95 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 trnA(ugc) tRNA trnA(ugc) trnA(ugc) 13141 13213 1 73 Genome 0.000000 0 0 97 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_017 igs trnA(ugc)|rnl trnA(ugc)-rnl 13214 13282 0 69 Genome 0.042029 6 0 170 13 no 1.000000 5 1.000000 0.042029 1.000000 68.300000 rnl rRNA rnl rnl 13283 16154 1 2872 Genome 0.003134 20 0 17 28 no 1.000000 5 1.000000 0.003134 1.000000 44.400000 IGS_018 igs rnl|rrn5S rnl-rrn5S 16155 16209 0 55 Genome 0.041818 4 0 300 30 no 1.000000 5 1.000000 0.041818 0.981818 67.400000 rrn5S rRNA rrn5S rrn5S 16210 16332 1 123 Genome 0.011382 3 0 22 3 no 0.400000 3 0.666667 0.011382 1.000000 34.600000 IGS_019 igs rrn5S|psbY rrn5S-psbY 16333 16515 0 183 Genome 0.071038 26 0 28 35 no 1.000000 5 1.000000 0.071038 1.000000 74.600000 psbY gene psbY psbY 16516 16626 1 111 Genome 0.014414 3 0 118 18 no 0.600000 4 0.750000 0.014414 1.000000 41.200000 IGS_020 igs psbY|rpl32 psbY-rpl32 16627 16816 0 190 Genome 0.054737 20 0 6 30 no 1.000000 5 1.000000 0.054737 0.994737 72.900000 rpl32 gene rpl32 rpl32 16817 16981 1 165 Genome 0.022424 8 0 11 22 no 1.000000 5 1.000000 0.022424 1.000000 54.500000 IGS_021 igs rpl32|trnL(uag) rpl32-trnL(uag) 16982 17104 0 123 Genome 0.058192 14 15 6 82 no 1.000000 5 1.000000 0.055892 0.959350 76.900000 trnL(uag) tRNA trnL(uag) trnL(uag) 17105 17186 1 82 Genome 0.000000 0 0 0 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_022 igs trnL(uag)|lysR trnL(uag)-lysR 17187 17226 0 40 Genome 0.065000 6 0 82 8 no 1.000000 5 1.000000 0.065000 1.000000 73.100000 lysR gene lysR lysR 17227 18150 1 924 Genome 0.070996 131 0 13 0 no 1.000000 5 1.000000 0.070996 0.996753 78.700000 IGS_023 igs lysR|rpl21 lysR-rpl21 18151 18233 0 83 Genome 0.075904 12 0 3 17 no 1.000000 5 1.000000 0.075904 1.000000 72.700000 rpl21 gene rpl21 rpl21 18234 18551 1 318 Genome 0.058176 35 0 3 3 no 1.000000 5 1.000000 0.058176 1.000000 73.100000 IGS_024 igs rpl21|rpl27 rpl21-rpl27 18552 18571 0 20 Genome 0.213333 8 2 10 5 no 0.600000 4 0.750000 NA 0.950000 69.400000 rpl27 gene rpl27 rpl27 18572 18826 1 255 Genome 0.046667 24 0 2 2 no 1.000000 5 1.000000 0.046667 1.000000 70.400000 IGS_025 igs rpl27|secA rpl27-secA 18827 18854 0 28 Genome 0.014286 1 0 21 38 no 0.200000 2 0.500000 0.014286 1.000000 35.000000 secA gene secA secA 18855 21491 1 2637 Genome 0.050171 277 0 25 15 no 1.000000 5 1.000000 0.050171 1.000000 77.500000 IGS_026 igs secA|rpl34 secA-rpl34 21492 21532 0 41 Genome 0.029268 3 0 39 15 no 0.600000 4 0.750000 0.029268 1.000000 53.400000 rpl34 gene rpl34 rpl34 21533 21679 1 147 Genome 0.054422 16 0 7 5 no 1.000000 5 1.000000 0.054422 1.000000 72.900000 IGS_027 igs rpl34|ycf46 rpl34-ycf46 21680 21791 0 112 Genome 0.045536 11 0 0 11 no 1.000000 5 1.000000 0.045536 1.000000 70.300000 ycf46 gene ycf46 ycf46 21792 23285 1 1494 Genome 0.068139 204 5 8 5 yes 1.000000 5 1.000000 0.067736 0.995984 79.400000 IGS_028 igs ycf46|ccs1 ycf46-ccs1 23286 23292 0 7 Genome 0.057143 1 1 0 4 no 0.400000 3 0.666667 NA 0.857143 63.000000 ccs1 gene ccs1 ccs1 23293 24558 1 1266 Genome 0.071959 189 0 1 4 no 1.000000 5 1.000000 0.071959 0.999210 78.800000 IGS_029 igs ccs1|psbA ccs1-psbA 24559 24651 0 93 Genome 0.044086 8 0 27 98 no 1.000000 5 1.000000 0.044086 1.000000 70.100000 psbA gene psbA psbA 24652 25734 1 1083 Genome 0.005171 13 0 36 1 no 0.600000 4 0.750000 0.005171 1.000000 40.200000 IGS_030 igs psbA|ycf35 psbA-ycf35 25735 25994 0 260 Genome 0.142802 69 6 6 59 no 1.000000 5 1.000000 0.143695 0.984615 75.300000 ycf35 gene ycf35 ycf35 25995 26402 1 408 Genome 0.051961 43 0 1 0 no 1.000000 5 1.000000 0.051961 0.997549 74.700000 IGS_031 igs ycf35|psaC ycf35-psaC 26403 26514 0 112 Genome 0.150751 33 16 3 12 no 1.000000 5 1.000000 0.152055 0.982143 77.700000 psaC gene psaC psaC 26515 26760 -1 246 Genome 0.023171 12 0 4 42 no 0.600000 4 0.750000 0.023171 1.000000 46.800000 IGS_032 igs psaC|ccsA psaC-ccsA 26761 26838 0 78 Genome 0.014103 2 0 11 12 no 0.400000 3 0.666667 0.014103 1.000000 36.600000 ccsA gene ccsA ccsA 26839 27816 -1 978 Genome 0.038446 77 0 11 64 no 1.000000 5 1.000000 0.038446 1.000000 71.700000 IGS_033 igs ccsA|rps16 ccsA-rps16 27817 28055 0 239 Genome 0.091139 42 2 95 2 no 1.000000 5 1.000000 0.091139 0.983264 73.300000 rps16 gene rps16 rps16 28056 28292 -1 237 Genome 0.086076 47 0 19 12 no 1.000000 5 1.000000 0.086076 1.000000 73.400000 IGS_034 igs rps16|rps4 rps16-rps4 28293 28365 0 73 Genome 0.113242 15 15 15 3 no 1.000000 5 1.000000 0.097566 1.000000 76.600000 rps4 gene rps4 rps4 28366 28977 -1 612 Genome 0.065686 82 0 2 1 no 1.000000 5 1.000000 0.065686 1.000000 78.800000 IGS_035 igs rps4|trnH(gug) rps4-trnH(gug) 28978 29044 0 67 Genome 0.102985 14 0 14 88 no 1.000000 5 1.000000 0.102985 1.000000 73.600000 trnH(gug) tRNA trnH(gug) trnH(gug) 29045 29118 -1 74 Genome 0.000000 0 0 3 14 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_036 igs trnH(gug)|thiS trnH(gug)-thiS 29119 29205 0 87 Genome 0.043295 8 12 77 3 no 1.000000 5 1.000000 0.040322 0.988506 73.800000 thiS gene thiS thiS 29206 29418 1 213 Genome 0.116901 48 1 3 6 no 1.000000 5 1.000000 0.116186 0.995305 73.200000 IGS_037 igs thiS|psbW thiS-psbW 29419 29466 0 48 Genome 0.155556 12 7 1 1 no 1.000000 5 1.000000 0.120434 0.916667 75.300000 psbW gene psbW psbW 29467 29850 -1 384 Genome 0.079688 63 1 0 3 no 1.000000 5 1.000000 0.079883 0.997396 74.500000 IGS_038 igs psbW|trnQ(uug) psbW-trnQ(uug) 29851 29921 0 71 Genome 0.204225 27 0 1 90 no 1.000000 5 1.000000 0.204225 1.000000 72.600000 trnQ(uug) tRNA trnQ(uug) trnQ(uug) 29922 29993 -1 72 Genome 0.000000 0 0 3 18 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_039 igs trnQ(uug)|trnR(acg) trnQ(uug)-trnR(acg) 29994 30060 0 67 Genome 0.146766 19 11 75 87 yes 1.000000 5 1.000000 0.148948 1.000000 83.300000 trnR(acg) tRNA trnR(acg) trnR(acg) 30061 30134 -1 74 Genome 0.000000 0 0 3 13 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_040 igs trnR(acg)|groEL trnR(acg)-groEL 30135 30295 0 161 Genome 0.043478 16 0 77 20 no 1.000000 5 1.000000 0.043478 1.000000 71.000000 groEL gene groEL groEL 30296 31891 1 1596 Genome 0.065789 215 0 0 1 no 1.000000 5 1.000000 0.065789 0.998747 78.500000 IGS_041 igs groEL|dnaK groEL-dnaK 31892 32108 0 217 Genome 0.286287 72 153 6 6 no 1.000000 5 1.000000 0.269179 0.668203 68.800000 dnaK gene dnaK dnaK 32109 33905 -1 1797 Genome 0.063439 231 0 0 2 yes 1.000000 5 1.000000 0.063439 1.000000 78.100000 IGS_042 igs dnaK|rpl3 dnaK-rpl3 33906 34258 0 353 Genome 0.143429 92 22 5 59 yes 1.000000 5 1.000000 0.139536 0.988669 79.500000 rpl3 gene rpl3 rpl3 34259 34849 1 591 Genome 0.041794 49 0 70 5 no 1.000000 5 1.000000 0.041794 0.998308 73.100000 IGS_043 igs rpl3|rpl4 rpl3-rpl4 34850 34897 0 48 Genome 0.047917 5 1 4 47 no 0.600000 4 0.750000 0.044105 1.000000 66.800000 rpl4 gene rpl4 rpl4 34898 35545 1 648 Genome 0.041049 57 0 0 6 no 1.000000 5 1.000000 0.041049 1.000000 73.200000 rpl23 gene rpl23 rpl23 35538 35849 1 312 Genome 0.025000 18 0 30 8 no 1.000000 5 1.000000 0.025000 1.000000 56.800000 IGS_045 igs rpl23|rpl2 rpl23-rpl2 35850 35873 0 24 Genome 0.025000 1 0 21 39 no 0.000000 2 0.000000 0.025000 1.000000 36.800000 rpl2 gene rpl2 rpl2 35874 36701 1 828 Genome 0.066184 113 0 15 7 yes 1.000000 5 1.000000 0.066184 1.000000 79.300000 IGS_046 igs rpl2|rps19 rpl2-rps19 36702 36739 0 38 Genome 0.057895 4 1 5 35 no 0.200000 3 0.333333 0.059175 1.000000 60.800000 rps19 gene rps19 rps19 36740 37018 1 279 Genome 0.019355 12 0 7 23 no 1.000000 5 1.000000 0.019355 1.000000 52.100000 IGS_047 igs rps19|ycf88 rps19-ycf88 37019 37032 0 14 Genome 0.000000 0 0 33 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 ycf88 gene ycf88 ycf88 37033 37428 1 396 Genome 0.031313 28 0 47 2 no 1.000000 5 1.000000 0.031313 1.000000 62.600000 IGS_048 igs ycf88|rpl22 ycf88-rpl22 37429 37509 0 81 Genome 0.032099 6 0 1 5 no 1.000000 5 1.000000 0.032099 1.000000 61.300000 rpl22 gene rpl22 rpl22 37510 37857 1 348 Genome 0.033621 26 0 14 88 no 1.000000 5 1.000000 0.033621 1.000000 64.000000 IGS_049 igs rpl22|rps3 rpl22-rps3 37858 37883 0 26 Genome 0.000000 0 0 24 62 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 rps3 gene rps3 rps3 37884 38528 1 645 Genome 0.054574 74 0 50 8 yes 1.000000 5 1.000000 0.054574 1.000000 79.300000 IGS_050 igs rps3|rpl16 rps3-rpl16 38529 38584 0 56 Genome 0.021429 3 1 3 35 no 0.400000 3 0.666667 0.021721 1.000000 44.900000 rpl16 gene rpl16 rpl16 38585 38995 1 411 Genome 0.045499 40 0 9 4 no 1.000000 5 1.000000 0.045499 1.000000 72.800000 IGS_051 igs rpl16|rpl29 rpl16-rpl29 38996 39001 0 6 Genome 0.066667 1 0 38 14 no 0.200000 2 0.500000 NA 1.000000 58.600000 rpl29 gene rpl29 rpl29 39002 39196 1 195 Genome 0.081538 39 24 1 0 no 0.600000 4 0.750000 0.086887 1.000000 70.500000 IGS_052 igs rpl29|rps17 rpl29-rps17 39197 39406 0 210 Genome 0.153810 67 19 1 14 no 1.000000 5 1.000000 0.151747 1.000000 78.300000 rps17 gene rps17 rps17 39407 39661 1 255 Genome 0.030588 19 0 52 50 no 0.600000 4 0.750000 0.030588 1.000000 56.800000 IGS_053 igs rps17|rpl14 rps17-rpl14 39662 39673 0 12 Genome 0.000000 0 0 38 38 no 0.000000 1 0.000000 NA 1.000000 21.600000 rpl14 gene rpl14 rpl14 39674 40039 1 366 Genome 0.044536 34 0 50 35 no 1.000000 5 1.000000 0.044536 1.000000 73.200000 rpl24 gene rpl24 rpl24 40040 40273 1 234 Genome 0.029487 13 5 45 47 no 0.600000 4 0.750000 0.029916 1.000000 56.000000 IGS_055 igs rpl24|rpl5 rpl24-rpl5 40274 40292 0 19 Genome 0.000000 0 5 69 28 no 0.000000 2 0.000000 NA 1.000000 23.800000 rpl5 gene rpl5 rpl5 40293 41009 1 717 Genome 0.053138 77 0 88 0 no 1.000000 5 1.000000 0.053138 1.000000 78.800000 IGS_056 igs rpl5|rps8 rpl5-rps8 41010 41043 0 34 Genome 0.011765 1 0 24 95 no 0.200000 2 0.500000 0.011765 1.000000 33.300000 rps8 gene rps8 rps8 41044 41442 1 399 Genome 0.029825 23 0 33 29 no 1.000000 5 1.000000 0.029825 0.997494 62.300000 IGS_057 igs rps8|rpl6 rps8-rpl6 41443 41460 0 18 Genome 0.000000 0 0 32 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 rpl6 gene rpl6 rpl6 41461 42000 1 540 Genome 0.088704 99 0 50 0 no 1.000000 5 1.000000 0.088704 1.000000 77.500000 IGS_058 igs rpl6|rpl18 rpl6-rpl18 42001 42031 0 31 Genome 0.045161 3 0 5 65 no 0.600000 4 0.750000 0.045161 1.000000 62.800000 rpl18 gene rpl18 rpl18 42032 42439 1 408 Genome 0.045098 38 0 1 64 no 1.000000 5 1.000000 0.045098 1.000000 71.800000 IGS_059 igs rpl18|rps5 rpl18-rps5 42440 42465 0 26 Genome 0.000000 0 0 8 38 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 rps5 gene rps5 rps5 42466 42996 1 531 Genome 0.053107 56 3 34 2 no 1.000000 5 1.000000 0.053235 0.998117 78.100000 IGS_060 igs rps5|secY rps5-secY 42997 43046 0 50 Genome 0.048000 5 0 18 20 no 0.600000 4 0.750000 0.048000 1.000000 65.500000 secY gene secY secY 43047 44297 1 1251 Genome 0.056035 142 0 14 1 no 1.000000 5 1.000000 0.056035 0.998401 78.800000 IGS_061 igs secY|rpl36 secY-rpl36 44298 44343 0 46 Genome 0.026087 3 0 1 44 no 0.600000 4 0.750000 0.026087 1.000000 50.000000 rpl36 gene rpl36 rpl36 44344 44457 1 114 Genome 0.021930 4 0 6 1 no 0.600000 4 0.750000 0.021930 1.000000 44.300000 IGS_062 igs rpl36|rps13 rpl36-rps13 44458 44478 0 21 Genome 0.038095 2 0 30 20 no 0.200000 2 0.500000 0.038095 1.000000 53.000000 rps13 gene rps13 rps13 44479 44850 1 372 Genome 0.070968 54 0 2 57 no 1.000000 5 1.000000 0.070968 1.000000 74.100000 IGS_063 igs rps13|rps11 rps13-rps11 44851 44895 0 45 Genome 0.000000 0 0 33 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 rps11 gene rps11 rps11 44896 45288 1 393 Genome 0.043003 39 0 78 22 no 1.000000 5 1.000000 0.043003 1.000000 72.800000 IGS_064 igs rps11|rpoA rps11-rpoA 45289 45316 0 28 Genome 0.028571 2 0 24 62 no 0.400000 3 0.666667 0.028571 1.000000 49.800000 rpoA gene rpoA rpoA 45317 46279 1 963 Genome 0.040914 80 0 4 13 no 1.000000 5 1.000000 0.040914 1.000000 72.800000 IGS_065 igs rpoA|rpl13 rpoA-rpl13 46280 46302 0 23 Genome 0.017391 1 0 51 23 no 0.200000 2 0.500000 0.017391 1.000000 37.500000 rpl13 gene rpl13 rpl13 46303 46719 1 417 Genome 0.048921 41 0 9 0 no 1.000000 5 1.000000 0.048921 1.000000 74.200000 IGS_066 igs rpl13|rps9 rpl13-rps9 46720 46748 0 29 Genome 0.055172 4 0 8 20 no 0.400000 3 0.666667 0.055172 1.000000 61.800000 rps9 gene rps9 rps9 46749 47153 1 405 Genome 0.057284 45 0 3 2 no 1.000000 5 1.000000 0.057284 1.000000 74.800000 IGS_067 igs rps9|rpl31 rps9-rpl31 47154 47166 0 13 Genome 0.030769 1 0 12 23 no 0.200000 2 0.500000 NA 1.000000 46.900000 rpl31 gene rpl31 rpl31 47167 47385 1 219 Genome 0.053881 24 5 10 4 no 1.000000 5 1.000000 0.054585 1.000000 75.500000 IGS_068 igs rpl31|rps12 rpl31-rps12 47386 47434 0 49 Genome 0.033333 3 9 11 8 no 0.600000 4 0.750000 0.030204 1.000000 58.400000 rps12 gene rps12 rps12 47435 47809 1 375 Genome 0.051733 40 0 13 8 no 1.000000 5 1.000000 0.051733 1.000000 74.700000 IGS_069 igs rps12|rps7 rps12-rps7 47810 47867 0 58 Genome 0.046552 6 0 9 20 no 1.000000 5 1.000000 0.046552 1.000000 71.600000 rps7 gene rps7 rps7 47868 48338 1 471 Genome 0.037792 39 0 2 8 no 1.000000 5 1.000000 0.037792 1.000000 68.600000 IGS_070 igs rps7|tufA rps7-tufA 48339 48425 0 87 Genome 0.060920 11 0 27 32 no 1.000000 5 1.000000 0.060920 1.000000 74.500000 tufA gene tufA tufA 48426 49655 1 1230 Genome 0.056504 141 0 21 46 yes 1.000000 5 1.000000 0.056504 1.000000 80.300000 IGS_071 igs tufA|rps10 tufA-rps10 49656 49669 0 14 Genome 0.000000 0 1 8 32 no 0.200000 2 0.500000 NA 1.000000 28.900000 rps10 gene rps10 rps10 49670 49993 1 324 Genome 0.039815 27 0 22 1 no 1.000000 5 1.000000 0.039815 1.000000 66.400000 IGS_072 igs rps10|trnL(uaa) rps10-trnL(uaa) 49994 50104 0 111 Genome 0.141748 31 10 3 91 no 1.000000 5 1.000000 0.139056 0.927928 76.200000 trnL(uaa) tRNA trnL(uaa) trnL(uaa) 50105 50191 -1 87 Genome 0.000000 0 0 4 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_073 igs trnL(uaa)|trnC(gca) trnL(uaa)-trnC(gca) 50192 50259 0 68 Genome 0.097059 14 0 91 86 no 1.000000 5 1.000000 0.097059 1.000000 79.000000 trnC(gca) tRNA trnC(gca) trnC(gca) 50260 50330 -1 71 Genome 0.000000 0 0 9 15 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_074 igs trnC(gca)|clpC trnC(gca)-clpC 50331 50536 0 206 Genome 0.081068 37 0 80 17 no 1.000000 5 1.000000 0.081068 1.000000 73.800000 clpC gene clpC clpC 50537 53281 1 2745 Genome 0.078251 441 3 12 2 no 1.000000 5 1.000000 0.078283 0.999271 76.400000 IGS_075 igs clpC|thiG clpC-thiG 53282 53408 0 127 Genome 0.177031 37 41 14 7 no 1.000000 5 1.000000 0.173108 0.881890 73.400000 thiG gene thiG thiG 53409 54218 -1 810 Genome 0.088148 138 0 0 2 yes 1.000000 5 1.000000 0.088148 0.997531 78.700000 IGS_076 igs thiG|trnN(guu) thiG-trnN(guu) 54219 54253 0 35 Genome 0.131429 11 0 9 80 no 1.000000 5 1.000000 0.131429 1.000000 73.200000 trnN(guu) tRNA trnN(guu) trnN(guu) 54254 54325 -1 72 Genome 0.000000 0 0 1 8 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_077 igs trnN(guu)|rps6 trnN(guu)-rps6 54326 54390 0 65 Genome 0.061538 8 0 73 3 no 1.000000 5 1.000000 0.061538 1.000000 72.700000 rps6 gene rps6 rps6 54391 54711 -1 321 Genome 0.017445 13 0 16 1 no 1.000000 5 1.000000 0.017445 1.000000 50.900000 IGS_078 igs rps6|ccsA rps6-ccsA 54712 55001 0 290 Genome 0.080556 46 2 45 95 no 1.000000 5 1.000000 0.080556 0.986207 76.400000 ccsA gene ccsA ccsA 55002 55979 1 978 Genome 0.038446 77 0 64 11 no 1.000000 5 1.000000 0.038446 1.000000 71.700000 IGS_079 igs ccsA|psaC ccsA-psaC 55980 56057 0 78 Genome 0.014103 2 0 12 11 no 0.400000 3 0.666667 0.014103 1.000000 36.600000 psaC gene psaC psaC 56058 56303 1 246 Genome 0.023171 12 0 42 4 no 0.600000 4 0.750000 0.023171 1.000000 46.800000 IGS_080 igs psaC|ycf35 psaC-ycf35 56304 56415 0 112 Genome 0.150751 33 16 12 3 no 1.000000 5 1.000000 0.152055 0.982143 77.700000 ycf35 gene ycf35 ycf35 56416 56823 -1 408 Genome 0.051961 43 0 0 1 no 1.000000 5 1.000000 0.051961 0.997549 74.700000 IGS_081 igs ycf35|psbA ycf35-psbA 56824 57083 0 260 Genome 0.144358 70 6 59 6 no 1.000000 5 1.000000 0.145270 0.984615 75.300000 psbA gene psbA psbA 57084 58166 -1 1083 Genome 0.005171 13 0 1 36 no 0.600000 4 0.750000 0.005171 1.000000 40.200000 IGS_082 igs psbA|ccs1 psbA-ccs1 58167 58259 0 93 Genome 0.044086 8 0 98 27 no 1.000000 5 1.000000 0.044086 1.000000 70.100000 ccs1 gene ccs1 ccs1 58260 59525 -1 1266 Genome 0.071959 189 0 4 1 no 1.000000 5 1.000000 0.071959 0.999210 78.800000 IGS_083 igs ccs1|ycf46 ccs1-ycf46 59526 59532 0 7 Genome 0.057143 1 5 4 0 no 0.400000 3 0.666667 NA 0.285714 52.300000 ycf46 gene ycf46 ycf46 59533 61026 -1 1494 Genome 0.068139 204 1 5 8 yes 1.000000 5 1.000000 0.067577 0.998661 79.200000 IGS_084 igs ycf46|rpl34 ycf46-rpl34 61027 61138 0 112 Genome 0.045536 11 0 11 0 no 1.000000 5 1.000000 0.045536 1.000000 70.300000 rpl34 gene rpl34 rpl34 61139 61285 -1 147 Genome 0.054422 16 0 5 7 no 1.000000 5 1.000000 0.054422 1.000000 72.900000 IGS_085 igs rpl34|secA rpl34-secA 61286 61326 0 41 Genome 0.029268 3 0 15 39 no 0.600000 4 0.750000 0.029268 1.000000 53.400000 secA gene secA secA 61327 63963 -1 2637 Genome 0.050171 277 0 15 25 no 1.000000 5 1.000000 0.050171 1.000000 77.500000 IGS_086 igs secA|rpl27 secA-rpl27 63964 63991 0 28 Genome 0.014286 1 0 38 21 no 0.200000 2 0.500000 0.014286 1.000000 35.000000 rpl27 gene rpl27 rpl27 63992 64246 -1 255 Genome 0.046667 24 0 2 2 no 1.000000 5 1.000000 0.046667 1.000000 70.400000 IGS_087 igs rpl27|rpl21 rpl27-rpl21 64247 64266 0 20 Genome 0.200000 8 2 5 10 no 0.600000 4 0.750000 NA 0.950000 69.400000 rpl21 gene rpl21 rpl21 64267 64584 -1 318 Genome 0.058176 35 0 3 3 no 1.000000 5 1.000000 0.058176 1.000000 73.100000 IGS_088 igs rpl21|lysR rpl21-lysR 64585 64667 0 83 Genome 0.075904 12 0 17 3 no 1.000000 5 1.000000 0.075904 1.000000 72.700000 lysR gene lysR lysR 64668 65591 -1 924 Genome 0.070996 131 0 0 13 no 1.000000 5 1.000000 0.070996 0.996753 78.700000 IGS_089 igs lysR|trnL(uag) lysR-trnL(uag) 65592 65631 0 40 Genome 0.065000 6 0 8 82 no 1.000000 5 1.000000 0.065000 1.000000 73.100000 trnL(uag) tRNA trnL(uag) trnL(uag) 65632 65713 -1 82 Genome 0.000000 0 0 0 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_090 igs trnL(uag)|rpl32 trnL(uag)-rpl32 65714 65836 0 123 Genome 0.058192 14 15 82 6 no 1.000000 5 1.000000 0.055892 0.959350 76.900000 rpl32 gene rpl32 rpl32 65837 66001 -1 165 Genome 0.022424 8 0 22 11 no 1.000000 5 1.000000 0.022424 1.000000 54.500000 IGS_091 igs rpl32|psbY rpl32-psbY 66002 66191 0 190 Genome 0.054737 20 0 30 6 no 1.000000 5 1.000000 0.054737 0.994737 72.900000 psbY gene psbY psbY 66192 66302 -1 111 Genome 0.014414 3 0 18 118 no 0.600000 4 0.750000 0.014414 1.000000 41.200000 IGS_092 igs psbY|rrn5S psbY-rrn5S 66303 66485 0 183 Genome 0.071038 26 0 35 28 no 1.000000 5 1.000000 0.071038 1.000000 74.600000 rrn5S rRNA rrn5S rrn5S 66486 66608 -1 123 Genome 0.011382 3 0 3 22 no 0.400000 3 0.666667 0.011382 1.000000 34.600000 IGS_093 igs rrn5S|rnl rrn5S-rnl 66609 66663 0 55 Genome 0.041818 4 0 30 300 no 1.000000 5 1.000000 0.041818 0.981818 67.400000 rnl rRNA rnl rnl 66664 69535 -1 2872 Genome 0.003134 20 0 28 17 no 1.000000 5 1.000000 0.003134 1.000000 44.400000 IGS_094 igs rnl|trnA(ugc) rnl-trnA(ugc) 69536 69604 0 69 Genome 0.042029 6 0 13 170 no 1.000000 5 1.000000 0.042029 1.000000 68.300000 trnA(ugc) tRNA trnA(ugc) trnA(ugc) 69605 69677 -1 73 Genome 0.000000 0 0 14 97 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_095 igs trnA(ugc)|trnI(gau) trnA(ugc)-trnI(gau) 69678 69679 0 2 Genome 0.000000 0 0 87 95 no 0.000000 1 0.000000 NA 1.000000 25.300000 trnI(gau) tRNA trnI(gau) trnI(gau) 69680 69753 -1 74 Genome 0.000000 0 0 89 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_096 igs trnI(gau)|rns trnI(gau)-rns 69754 69811 0 58 Genome 0.027586 3 0 163 300 no 1.000000 5 1.000000 0.027586 1.000000 68.600000 rns rRNA rns rns 69812 71302 -1 1491 Genome 0.002951 11 0 21 13 no 0.600000 4 0.750000 0.002951 1.000000 39.500000 IGS_097 igs rns|ycf89 rns-ycf89 71303 71576 0 274 Genome 0.167153 89 15 3 15 yes 1.000000 5 1.000000 0.166047 1.000000 78.600000 ycf89 gene ycf89 ycf89 71577 72539 -1 963 Genome 0.060644 125 0 0 0 no 1.000000 5 1.000000 0.060644 0.998962 78.700000 IGS_098 igs ycf89|trnP(ugg) ycf89-trnP(ugg) 72540 72875 0 336 Genome 0.126269 81 35 18 75 no 1.000000 5 1.000000 0.115696 0.949405 78.800000 trnP(ugg) tRNA trnP(ugg) trnP(ugg) 72876 72949 1 74 Genome 0.000000 0 0 5 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_099 igs trnP(ugg)|psaJ trnP(ugg)-psaJ 72950 73068 0 119 Genome 0.147059 34 0 79 24 no 1.000000 5 1.000000 0.147059 1.000000 74.300000 psaJ gene psaJ psaJ 73069 73194 -1 126 Genome 0.017460 5 0 1 4 no 1.000000 5 1.000000 0.017460 1.000000 50.400000 IGS_100 igs psaJ|psaF psaJ-psaF 73195 73232 0 38 Genome 0.047368 4 0 32 12 no 0.600000 4 0.750000 0.047368 1.000000 64.700000 psaF gene psaF psaF 73233 73790 -1 558 Genome 0.038530 44 0 6 12 no 1.000000 5 1.000000 0.038530 1.000000 70.500000 IGS_101 igs psaF|psbI psaF-psbI 73791 74018 0 228 Genome 0.088012 36 32 18 18 yes 1.000000 5 1.000000 0.081114 1.000000 79.200000 psbI gene psbI psbI 74019 74135 -1 117 Genome 0.014530 3 0 0 51 no 0.600000 4 0.750000 0.014530 1.000000 39.700000 IGS_102 igs psbI|ycf41 psbI-ycf41 74136 74246 0 111 Genome 0.044444 10 17 20 21 no 1.000000 5 1.000000 0.038643 1.000000 75.600000 ycf41 gene ycf41 ycf41 74247 74561 -1 315 Genome 0.087937 55 0 2 1 no 1.000000 5 1.000000 0.087937 1.000000 72.900000 IGS_103 igs ycf41|ycf39 ycf41-ycf39 74562 74579 0 18 Genome 0.211111 8 0 8 6 no 1.000000 5 1.000000 NA 1.000000 73.000000 ycf39 gene ycf39 ycf39 74580 75539 -1 960 Genome 0.072708 146 0 3 1 no 1.000000 5 1.000000 0.072708 1.000000 78.800000 IGS_104 igs ycf39|cbbX ycf39-cbbX 75540 75588 0 49 Genome 0.148980 13 29 15 5 no 1.000000 5 1.000000 0.188469 1.000000 75.400000 cbbX gene cbbX cbbX 75589 76452 -1 864 Genome 0.070602 119 0 5 3 no 1.000000 5 1.000000 0.070602 0.998843 79.000000 IGS_105 igs cbbX|psaL cbbX-psaL 76453 76531 0 79 Genome 0.034177 6 0 8 21 no 1.000000 5 1.000000 0.034177 1.000000 63.000000 psaL gene psaL psaL 76532 76978 -1 447 Genome 0.025280 23 0 26 300 no 1.000000 5 1.000000 0.025280 0.997763 60.300000 IGS_106 igs psaL|petL psaL-petL 76979 77153 0 175 Genome 0.000000 0 0 29 135 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 petL gene petL petL 77154 77249 1 96 Genome 0.000000 0 0 204 39 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 IGS_107 igs petL|ycf4 petL-ycf4 77250 77258 0 9 Genome 0.000000 0 0 300 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 ycf4 gene ycf4 ycf4 77259 77804 1 546 Genome 0.026923 30 0 300 31 no 1.000000 5 1.000000 0.026923 1.000000 63.900000 IGS_108 igs ycf4|trnG(ucc) ycf4-trnG(ucc) 77805 77854 0 50 Genome 0.012000 1 0 33 117 no 0.000000 2 0.000000 0.012000 1.000000 29.100000 trnG(ucc) tRNA trnG(ucc) trnG(ucc) 77855 77925 1 71 Genome 0.000000 0 0 18 46 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_109 igs trnG(ucc)|psbE trnG(ucc)-psbE 77926 77980 0 55 Genome 0.014545 2 0 89 86 no 0.400000 3 0.666667 0.014545 1.000000 43.800000 psbE gene psbE psbE 77981 78235 1 255 Genome 0.008627 5 0 4 14 no 1.000000 5 1.000000 0.008627 1.000000 44.100000 IGS_110 igs psbE|psbF psbE-psbF 78236 78246 0 11 Genome 0.000000 0 0 87 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 psbF gene psbF psbF 78247 78378 1 132 Genome 0.030303 9 0 98 106 no 1.000000 5 1.000000 0.030303 1.000000 67.000000 IGS_111 igs psbF|psbL psbF-psbL 78379 78413 0 35 Genome 0.000000 0 0 21 71 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 psbL gene psbL psbL 78414 78530 1 117 Genome 0.003419 1 0 56 77 no 0.200000 2 0.500000 0.003419 1.000000 29.300000 IGS_112 igs psbL|psbJ psbL-psbJ 78531 78554 0 24 Genome 0.000000 0 0 45 53 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 psbJ gene psbJ psbJ 78555 78674 1 120 Genome 0.018333 5 0 69 14 no 0.600000 4 0.750000 0.018333 1.000000 44.500000 IGS_113 igs psbJ|ycf90 psbJ-ycf90 78675 78763 0 89 Genome 0.076404 14 2 33 15 no 1.000000 5 1.000000 0.077602 1.000000 76.200000 ycf90 gene ycf90 ycf90 78764 80185 -1 1422 Genome 0.062025 178 0 4 40 no 1.000000 5 1.000000 0.062025 0.998594 79.000000 IGS_114 igs ycf90|petD ycf90-petD 80186 80383 0 198 Genome 0.036364 13 0 17 33 no 1.000000 5 1.000000 0.036364 1.000000 63.300000 petD gene petD petD 80384 80866 -1 483 Genome 0.036853 37 0 1 4 no 1.000000 5 1.000000 0.036853 0.997930 67.500000 IGS_115 igs petD|petB petD-petB 80867 80912 0 46 Genome 0.052174 5 0 8 3 no 0.600000 4 0.750000 0.052174 1.000000 65.200000 petB gene petB petB 80913 81560 -1 648 Genome 0.031327 42 0 6 40 no 1.000000 5 1.000000 0.031327 1.000000 66.400000 IGS_116 igs petB|trnS(uga) petB-trnS(uga) 81561 81635 0 75 Genome 0.132000 19 0 83 98 no 1.000000 5 1.000000 0.132000 1.000000 78.700000 trnS(uga) tRNA trnS(uga) trnS(uga) 81636 81723 -1 88 Genome 0.000000 0 0 2 10 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_117 igs trnS(uga)|psaD trnS(uga)-psaD 81724 81757 0 34 Genome 0.035294 2 0 90 21 no 0.600000 4 0.750000 0.035294 1.000000 54.800000 psaD gene psaD psaD 81758 82177 -1 420 Genome 0.027857 27 0 18 33 no 1.000000 5 1.000000 0.027857 1.000000 61.900000 IGS_118 igs psaD|trnM(cau) psaD-trnM(cau) 82178 82260 0 83 Genome 0.028916 5 0 15 10 no 0.600000 4 0.750000 0.028916 1.000000 51.300000 trnM(cau) tRNA trnM(cau) trnM(cau) 82261 82334 -1 74 Genome 0.005405 1 0 0 3 no 0.200000 2 0.500000 0.005405 1.000000 26.600000 IGS_119 igs trnM(cau)|secG trnM(cau)-secG 82335 82449 0 115 Genome 0.164348 37 1 63 4 no 1.000000 5 1.000000 0.165133 1.000000 73.800000 secG gene secG secG 82450 82659 -1 210 Genome 0.062857 27 0 0 3 no 1.000000 5 1.000000 0.062857 1.000000 72.500000 IGS_120 igs secG|trnE(uuc) secG-trnE(uuc) 82660 82762 0 103 Genome 0.159223 32 0 14 27 no 1.000000 5 1.000000 0.159223 0.990291 73.400000 trnE(uuc) tRNA trnE(uuc) trnE(uuc) 82763 82835 -1 73 Genome 0.016438 3 0 11 8 no 0.200000 2 0.500000 0.016438 1.000000 35.600000 IGS_121 igs trnE(uuc)|trnG(gcc) trnE(uuc)-trnG(gcc) 82836 82863 0 28 Genome 0.092857 5 1 27 75 no 1.000000 5 1.000000 0.095238 1.000000 78.500000 trnG(gcc) tRNA trnG(gcc) trnG(gcc) 82864 82935 -1 72 Genome 0.000000 0 0 2 3 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_122 igs trnG(gcc)|psbZ trnG(gcc)-psbZ 82936 83083 0 148 Genome 0.115991 33 5 74 48 yes 1.000000 5 1.000000 0.108924 0.993243 79.900000 psbZ gene psbZ psbZ 83084 83269 -1 186 Genome 0.007527 3 0 39 64 no 0.200000 3 0.333333 0.007527 1.000000 30.800000 IGS_123 igs psbZ|ycf12 psbZ-ycf12 83270 83324 0 55 Genome 0.000000 0 0 80 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 ycf12 gene ycf12 ycf12 83325 83429 -1 105 Genome 0.007619 2 0 135 89 no 0.400000 3 0.666667 0.007619 1.000000 38.700000 IGS_124 igs ycf12|trnK(uuu) ycf12-trnK(uuu) 83430 83672 0 243 Genome 0.026337 13 0 40 74 no 1.000000 5 1.000000 0.026337 1.000000 59.000000 trnK(uuu) tRNA trnK(uuu) trnK(uuu) 83673 83744 1 72 Genome 0.000000 0 0 13 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_125 igs trnK(uuu)|psbC trnK(uuu)-psbC 83745 83831 0 87 Genome 0.102299 18 3 85 30 no 1.000000 5 1.000000 0.104187 1.000000 78.800000 psbC gene psbC psbC 83832 85247 -1 1416 Genome 0.029661 88 0 4 13 no 1.000000 5 1.000000 0.029661 1.000000 65.200000 psbD gene psbD psbD 85195 86250 -1 1056 Genome 0.025947 55 0 39 49 no 1.000000 5 1.000000 0.025947 1.000000 64.900000 IGS_127 igs psbD|psaI psbD-psaI 86251 86463 0 213 Genome 0.061659 27 5 67 9 no 1.000000 5 1.000000 0.059051 1.000000 76.000000 psaI gene psaI psaI 86464 86574 -1 111 Genome 0.036036 9 0 23 3 no 1.000000 5 1.000000 0.036036 1.000000 64.100000 IGS_128 igs psaI|psbK psaI-psbK 86575 86762 0 188 Genome 0.017021 8 0 35 63 no 0.600000 4 0.750000 0.017021 1.000000 45.600000 psbK gene psbK psbK 86763 86897 1 135 Genome 0.013333 4 0 14 13 no 0.600000 4 0.750000 0.013333 1.000000 40.700000 IGS_129 igs psbK|petG psbK-petG 86898 87004 0 107 Genome 0.014953 3 0 9 20 no 0.200000 3 0.333333 0.014953 1.000000 33.400000 petG gene petG petG 87005 87118 1 114 Genome 0.025439 6 0 2 29 no 1.000000 5 1.000000 0.025439 1.000000 55.700000 IGS_130 igs petG|trnY(gua) petG-trnY(gua) 87119 87308 0 190 Genome 0.122816 41 23 18 32 no 1.000000 5 1.000000 0.108298 0.973684 78.200000 trnY(gua) tRNA trnY(gua) trnY(gua) 87309 87390 -1 82 Genome 0.012195 2 0 4 7 no 0.200000 3 0.333333 0.012195 1.000000 31.300000 IGS_131 igs trnY(gua)|petM trnY(gua)-petM 87391 87539 0 149 Genome 0.175615 45 23 6 3 no 1.000000 5 1.000000 0.161814 1.000000 77.000000 petM gene petM petM 87540 87668 -1 129 Genome 0.007752 2 0 3 177 no 0.200000 3 0.333333 0.007752 1.000000 28.200000 IGS_132 igs petM|petN petM-petN 87669 87707 0 39 Genome 0.000000 0 0 93 138 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 petN gene petN petN 87708 87797 -1 90 Genome 0.000000 0 0 132 48 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_133 igs petN|trnD(guc) petN-trnD(guc) 87798 87986 0 189 Genome 0.061199 22 13 222 75 yes 1.000000 5 1.000000 0.054896 1.000000 83.900000 trnD(guc) tRNA trnD(guc) trnD(guc) 87987 88060 -1 74 Genome 0.000000 0 0 0 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_134 igs trnD(guc)|trnS(gcu) trnD(guc)-trnS(gcu) 88061 88134 0 74 Genome 0.091892 12 0 74 103 no 1.000000 5 1.000000 0.091892 1.000000 78.000000 trnS(gcu) tRNA trnS(gcu) trnS(gcu) 88135 88221 -1 87 Genome 0.000000 0 0 14 16 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_135 igs trnS(gcu)|trnM(cau) trnS(gcu)-trnM(cau) 88222 88247 0 26 Genome 0.030769 1 0 101 83 no 0.200000 3 0.333333 0.030769 1.000000 47.400000 trnM(cau) tRNA trnM(cau) trnM(cau) 88248 88320 -1 73 Genome 0.000000 0 0 9 10 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_136 igs trnM(cau)|ycf33 trnM(cau)-ycf33 88321 88453 0 133 Genome 0.071429 20 0 82 17 no 1.000000 5 1.000000 0.071429 1.000000 73.800000 ycf33 gene ycf33 ycf33 88454 88648 1 195 Genome 0.065128 26 0 8 1 no 1.000000 5 1.000000 0.065128 1.000000 72.600000 IGS_137 igs ycf33|trnT(ugu) ycf33-trnT(ugu) 88649 88928 0 280 Genome 0.233095 124 67 5 75 yes 1.000000 5 1.000000 0.235684 1.000000 77.500000 trnT(ugu) tRNA trnT(ugu) trnT(ugu) 88929 89000 -1 72 Genome 0.000000 0 0 2 3 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_138 igs trnT(ugu)|ftsH trnT(ugu)-ftsH 89001 89213 0 213 Genome 0.110032 44 29 74 23 no 1.000000 5 1.000000 0.097673 0.943662 78.000000 ftsH gene ftsH ftsH 89214 91139 1 1926 Genome 0.063863 254 0 0 1 no 1.000000 5 1.000000 0.063863 0.999481 77.900000 IGS_139 igs ftsH|rps14 ftsH-rps14 91140 91301 0 162 Genome 0.087654 30 0 3 41 no 1.000000 5 1.000000 0.087654 1.000000 72.700000 rps14 gene rps14 rps14 91302 91604 1 303 Genome 0.037954 25 0 43 0 no 1.000000 5 1.000000 0.037954 1.000000 65.000000 IGS_140 igs rps14|psaM rps14-psaM 91605 91736 0 132 Genome 0.036364 11 0 9 26 no 1.000000 5 1.000000 0.036364 1.000000 65.000000 psaM gene psaM psaM 91737 91829 1 93 Genome 0.023656 4 0 60 11 no 0.600000 4 0.750000 0.023656 1.000000 46.800000 IGS_141 igs psaM|chlI psaM-chlI 91830 91870 0 41 Genome 0.009756 1 0 15 27 no 0.200000 2 0.500000 0.009756 1.000000 31.100000 chlI gene chlI chlI 91871 92932 1 1062 Genome 0.051789 115 0 29 2 no 1.000000 5 1.000000 0.051789 0.998117 78.900000 IGS_142 igs chlI|petA chlI-petA 92933 93313 0 381 Genome 0.234037 170 15 3 3 yes 1.000000 5 1.000000 0.237493 0.992126 78.900000 petA gene petA petA 93314 94258 -1 945 Genome 0.044550 84 0 0 61 no 1.000000 5 1.000000 0.044550 1.000000 74.900000 IGS_143 igs petA|tatC petA-tatC 94259 94289 0 31 Genome 0.000000 0 0 45 30 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 tatC gene tatC tatC 94290 95030 -1 741 Genome 0.043185 68 0 76 7 no 1.000000 5 1.000000 0.043185 1.000000 75.200000 IGS_144 igs tatC|atpE tatC-atpE 95031 95160 0 130 Genome 0.077179 18 10 14 15 no 1.000000 5 1.000000 0.061581 0.992308 79.100000 atpE gene atpE atpE 95161 95562 -1 402 Genome 0.020398 18 0 17 4 no 1.000000 5 1.000000 0.020398 1.000000 54.700000 IGS_145 igs atpE|atpB atpE-atpB 95563 95576 0 14 Genome 0.028571 1 0 68 0 no 0.200000 2 0.500000 NA 1.000000 44.300000 atpB gene atpB atpB 95577 97001 -1 1425 Genome 0.027439 80 0 9 145 no 1.000000 5 1.000000 0.027439 1.000000 63.800000 IGS_146 igs atpB|ycf3 atpB-ycf3 97002 97168 0 167 Genome 0.008383 3 0 47 9 no 0.600000 4 0.750000 0.008383 1.000000 36.700000 ycf3 gene ycf3 ycf3 97169 97723 -1 555 Genome 0.039459 45 0 0 0 no 1.000000 5 1.000000 0.039459 1.000000 70.700000 IGS_147 igs ycf3|rps18 ycf3-rps18 97724 97774 0 51 Genome 0.107843 12 0 11 40 no 1.000000 5 1.000000 0.107843 1.000000 73.300000 rps18 gene rps18 rps18 97775 97993 -1 219 Genome 0.024201 11 0 0 16 no 1.000000 5 1.000000 0.024201 1.000000 54.700000 IGS_148 igs rps18|rpl33 rps18-rpl33 97994 97997 0 4 Genome 0.000000 0 0 37 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 rpl33 gene rpl33 rpl33 97998 98192 -1 195 Genome 0.026667 11 0 41 43 no 0.600000 4 0.750000 0.026667 1.000000 52.100000 IGS_149 igs rpl33|rps20 rpl33-rps20 98193 98381 0 189 Genome 0.078836 31 1 38 11 no 1.000000 5 1.000000 0.077989 1.000000 74.000000 rps20 gene rps20 rps20 98382 98663 1 282 Genome 0.095745 55 0 1 2 no 1.000000 5 1.000000 0.095745 1.000000 72.600000 IGS_150 igs rps20|rpoB rps20-rpoB 98664 99108 0 445 Genome 0.157154 137 64 4 71 yes 1.000000 5 1.000000 0.152193 0.993258 80.900000 rpoB gene rpoB rpoB 99109 103260 1 4152 Genome 0.074013 632 0 3 3 no 1.000000 5 1.000000 0.074013 0.999277 74.000000 IGS_151 igs rpoB|rpoC1 rpoB-rpoC1 103261 103269 0 9 Genome 0.088889 2 0 9 63 no 0.200000 2 0.500000 NA 1.000000 58.200000 rpoC1 gene rpoC1 rpoC1 103270 105468 1 2199 Genome 0.067531 296 0 4 8 no 1.000000 5 1.000000 0.067531 0.999090 77.600000 IGS_152 igs rpoC1|rpoC2 rpoC1-rpoC2 105469 105504 0 36 Genome 0.055556 4 0 21 8 no 0.600000 4 0.750000 0.055556 1.000000 65.600000 rpoC2 gene rpoC2 rpoC2 105505 109842 1 4338 Genome 0.086476 766 12 4 0 no 1.000000 5 1.000000 0.086441 0.997925 73.800000 IGS_153 igs rpoC2|rps2 rpoC2-rps2 109843 109923 0 81 Genome 0.054321 10 2 15 29 no 1.000000 5 1.000000 0.055196 1.000000 76.400000 rps2 gene rps2 rps2 109924 110607 1 684 Genome 0.058187 85 0 7 1 no 1.000000 5 1.000000 0.058187 0.998538 78.800000 IGS_154 igs rps2|rpl12 rps2-rpl12 110608 110690 0 83 Genome 0.148193 25 1 5 18 no 1.000000 5 1.000000 0.149221 1.000000 74.300000 rpl12 gene rpl12 rpl12 110691 111077 -1 387 Genome 0.052972 45 0 1 10 no 1.000000 5 1.000000 0.052972 1.000000 74.400000 IGS_155 igs rpl12|rpl1 rpl12-rpl1 111078 111148 0 71 Genome 0.115942 16 11 16 9 no 1.000000 5 1.000000 0.124295 0.957746 77.000000 rpl1 gene rpl1 rpl1 111149 111841 -1 693 Genome 0.063781 88 0 0 89 no 1.000000 5 1.000000 0.063781 1.000000 78.800000 IGS_156 igs rpl1|rpl11 rpl1-rpl11 111842 111876 0 35 Genome 0.000000 0 0 17 54 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 rpl11 gene rpl11 rpl11 111877 112302 -1 426 Genome 0.033333 29 0 52 39 no 1.000000 5 1.000000 0.033333 1.000000 66.600000 IGS_157 igs rpl11|trnW(cca) rpl11-trnW(cca) 112303 112485 0 183 Genome 0.067031 23 22 29 41 no 1.000000 5 1.000000 0.049925 0.934426 78.500000 trnW(cca) tRNA trnW(cca) trnW(cca) 112486 112558 -1 73 Genome 0.008219 1 0 46 5 no 0.000000 2 0.000000 0.008219 1.000000 24.500000 IGS_158 igs trnW(cca)|dnaB trnW(cca)-dnaB 112559 112636 0 78 Genome 0.087179 14 0 31 2 no 1.000000 5 1.000000 0.087179 1.000000 72.600000 dnaB gene dnaB dnaB 112637 114010 1 1374 Genome 0.079985 227 3 11 2 no 1.000000 5 1.000000 0.080069 0.997817 79.100000 IGS_159 igs dnaB|trnF(gaa) dnaB-trnF(gaa) 114011 114015 0 5 Genome 0.140000 1 0 2 11 no 0.400000 3 0.666667 NA 1.000000 61.400000 trnF(gaa) tRNA trnF(gaa) trnF(gaa) 114016 114088 -1 73 Genome 0.016438 2 0 2 3 no 0.000000 2 0.000000 0.016438 1.000000 29.700000 IGS_160 igs trnF(gaa)|ffs trnF(gaa)-ffs 114089 114170 0 82 Genome 0.057317 9 0 51 0 no 1.000000 5 1.000000 0.057317 1.000000 72.500000 ffs gene ffs ffs 114171 114279 1 109 Genome 0.061162 14 1 5 15 no 1.000000 5 1.000000 0.057170 1.000000 73.900000 IGS_161 igs ffs|ycf45 ffs-ycf45 114280 114527 0 248 Genome 0.239233 84 97 2 24 no 1.000000 5 1.000000 0.196229 0.657258 68.400000 ycf45 gene ycf45 ycf45 114528 115892 -1 1365 Genome 0.081245 218 0 10 19 yes 1.000000 5 1.000000 0.081245 0.998535 79.500000 IGS_162 igs ycf45|rpl20 ycf45-rpl20 115893 115966 0 74 Genome 0.051351 8 0 23 29 no 0.600000 4 0.750000 0.051351 1.000000 66.700000 rpl20 gene rpl20 rpl20 115967 116320 -1 354 Genome 0.026271 20 0 30 75 no 1.000000 5 1.000000 0.026271 1.000000 59.800000 IGS_163 igs rpl20|rpl35 rpl20-rpl35 116321 116328 0 8 Genome 0.000000 0 0 48 67 no 0.000000 1 0.000000 NA 1.000000 22.400000 rpl35 gene rpl35 rpl35 116329 116523 -1 195 Genome 0.008205 4 0 56 32 no 0.400000 3 0.666667 0.008205 1.000000 34.900000 IGS_164 igs rpl35|bas1 rpl35-bas1 116524 116529 0 6 Genome 0.000000 0 0 65 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 bas1 gene bas1 bas1 116530 117153 -1 624 Genome 0.046955 62 0 71 14 no 1.000000 5 1.000000 0.046955 1.000000 78.300000 IGS_165 igs bas1|psaE bas1-psaE 117154 117257 0 104 Genome 0.042949 9 3 17 0 no 1.000000 5 1.000000 0.039202 1.000000 70.900000 psaE gene psaE psaE 117258 117455 -1 198 Genome 0.065657 27 0 1 1 no 1.000000 5 1.000000 0.065657 0.994949 72.500000 IGS_166 igs psaE|trnR(ucu) psaE-trnR(ucu) 117456 117626 0 171 Genome 0.212229 64 41 5 80 no 1.000000 5 1.000000 0.205575 0.982456 77.000000 trnR(ucu) tRNA trnR(ucu) trnR(ucu) 117627 117699 -1 73 Genome 0.000000 0 0 1 7 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_167 igs trnR(ucu)|trnV(uac) trnR(ucu)-trnV(uac) 117700 117708 0 9 Genome 0.044444 1 0 74 80 no 0.200000 2 0.500000 NA 1.000000 60.500000 trnV(uac) tRNA trnV(uac) trnV(uac) 117709 117780 -1 72 Genome 0.000000 0 0 1 8 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_168 igs trnV(uac)|psbH trnV(uac)-psbH 117781 117997 0 217 Genome 0.159428 59 54 73 81 yes 1.000000 5 1.000000 0.158207 0.907834 79.300000 psbH gene psbH psbH 117998 118198 -1 201 Genome 0.007960 3 0 5 155 no 0.400000 3 0.666667 0.007960 1.000000 32.100000 IGS_169 igs psbH|psbN psbH-psbN 118199 118282 0 84 Genome 0.000000 0 0 59 71 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 psbN gene psbN psbN 118283 118414 1 132 Genome 0.010606 3 0 143 13 no 0.600000 4 0.750000 0.010606 1.000000 38.600000 IGS_170 igs psbN|psbT psbN-psbT 118415 118440 0 26 Genome 0.115385 5 0 39 12 no 0.000000 2 0.000000 0.115385 1.000000 54.600000 psbT gene psbT psbT 118441 118539 -1 99 Genome 0.006061 1 0 6 0 no 0.000000 2 0.000000 0.006061 1.000000 22.700000 IGS_171 igs psbT|psbB psbT-psbB 118540 118590 0 51 Genome 0.011765 1 0 86 15 no 0.000000 2 0.000000 0.011765 1.000000 27.600000 psbB gene psbB psbB 118591 120120 -1 1530 Genome 0.027712 91 0 50 137 no 1.000000 5 1.000000 0.027712 1.000000 67.300000 IGS_172 igs psbB|atpA psbB-atpA 120121 120320 0 200 Genome 0.014500 6 0 47 3 no 0.600000 4 0.750000 0.014500 1.000000 40.500000 atpA gene atpA atpA 120321 121832 -1 1512 Genome 0.038146 123 2 10 65 no 1.000000 5 1.000000 0.038146 0.998677 71.900000 IGS_173 igs atpA|atpD atpA-atpD 121833 121879 0 47 Genome 0.000000 0 0 44 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 atpD gene atpD atpD 121880 122443 -1 564 Genome 0.030142 37 0 91 22 no 1.000000 5 1.000000 0.030142 1.000000 66.400000 atpF gene atpF atpF 122440 122979 -1 540 Genome 0.036296 42 0 70 25 no 1.000000 5 1.000000 0.036296 1.000000 70.400000 IGS_175 igs atpF|atpG atpF-atpG 122980 123042 0 63 Genome 0.028571 4 0 80 15 no 1.000000 5 1.000000 0.028571 1.000000 59.400000 atpG gene atpG atpG 123043 123513 -1 471 Genome 0.019533 19 0 0 49 no 1.000000 5 1.000000 0.019533 1.000000 54.900000 IGS_176 igs atpG|atpH atpG-atpH 123514 123682 0 169 Genome 0.028402 11 0 53 5 no 0.600000 4 0.750000 0.028402 1.000000 51.300000 atpH gene atpH atpH 123683 123931 -1 249 Genome 0.009639 6 0 16 55 no 1.000000 5 1.000000 0.009639 1.000000 46.000000 IGS_177 igs atpH|atpI atpH-atpI 123932 123994 0 63 Genome 0.009524 1 0 89 9 no 0.000000 2 0.000000 0.009524 1.000000 25.700000 atpI gene atpI atpI 123995 124723 -1 729 Genome 0.018107 26 0 7 73 no 1.000000 5 1.000000 0.018107 1.000000 56.900000 IGS_178 igs atpI|sufC atpI-sufC 124724 124851 0 128 Genome 0.042187 11 0 50 8 no 1.000000 5 1.000000 0.042188 1.000000 67.800000 sufC gene sufC sufC 124852 125607 -1 756 Genome 0.058069 89 0 1 11 no 1.000000 5 1.000000 0.058069 0.998677 78.800000 sufB gene sufB sufB 125607 127064 -1 1458 Genome 0.066187 195 0 2 0 no 1.000000 5 1.000000 0.066187 0.997942 78.700000 IGS_180 igs sufB|rbcL sufB-rbcL 127065 127351 0 287 Genome 0.029965 13829 1197 21 93 no 1.000000 5 1.000000 0.052761 0.996772 71.200000