primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 75 257 249-269 1.000000 82.8 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG GCGCTAACCTTGGTATGGAA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.161600 75 257 299-319 1.000000 82.4 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA GCGCTAACCTTGGTATGGAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.165962 75 257 313-333 1.000000 82.2 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC GCGCTAACCTTGGTATGGAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.167469 75 257 312-332 1.000000 82.2 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTGATCC GCGCTAACCTTGGTATGGAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.167469 75 257 314-334 1.000000 82.2 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCCCTCGCTTCATCCAAATG AAAGGCGGAGGTTTTTAAGT 20 20 50.0 40.0 58.0 55.5 0.0 0.0 2.588179 4130 4896 843-873 1.000000 66.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCGATGGTATGGACGAATCC AAAGGCGGAGGTTTTTAAGT 20 20 55.0 40.0 57.9 55.5 0.0 0.0 2.625779 4130 4896 860-890 1.000000 65.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CGATGGTATGGACGAATCCC AAAGGCGGAGGTTTTTAAGT 20 20 55.0 40.0 57.9 55.5 0.0 0.0 2.625779 4130 4896 859-889 1.000000 65.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAAGCCGAGTACTCTACCGT AAAGGCGGAGGTTTTTAAGT 20 20 50.0 40.0 58.2 55.5 20.3 0.0 2.713913 4130 4896 799-829 1.000000 65.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT AAAGGCGGAGGTTTTTAAGT 20 20 50.0 40.0 58.2 55.5 20.3 0.0 2.713913 4130 4896 798-828 1.000000 65.1 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG ACGCCCCGGATCATTAGATA 20 20 50.0 50.0 57.9 58.1 1.4 0.7 0.123073 7858 8254 517-518 1.000000 81.5 psbK-psbI_p2 psbK-psbI 2 GTTTGGCAAGCTGCTGTAAG TACGCCCCGGATCATTAGAT 20 20 50.0 50.0 57.9 58.1 1.4 0.7 0.123073 7858 8254 518-519 1.000000 81.5 psbK-psbI_p3 psbK-psbI 3 GTTTGGCAAGCTGCTGTAAG TTACGCCCCGGATCATTAGA 20 20 50.0 50.0 57.9 58.3 1.4 0.7 0.348988 7858 8254 519-520 1.000000 79.7 psbK-psbI_p4 psbK-psbI 4 TGGCAAGCTGCTGTAAGTTT ACGCCCCGGATCATTAGATA 20 20 45.0 50.0 58.3 58.1 1.4 0.7 0.375782 7858 8254 514-515 1.000000 79.5 psbK-psbI_p5 psbK-psbI 5 TGGCAAGCTGCTGTAAGTTT TACGCCCCGGATCATTAGAT 20 20 45.0 50.0 58.3 58.1 1.4 0.7 0.375782 7858 8254 515-516 1.000000 79.5 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 9886 10072 266-304 1.000000 72.8 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 9886 10072 269-307 1.000000 72.5 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 9886 10072 272-310 1.000000 72.0 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 9886 10072 275-313 1.000000 71.7 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 9886 10072 270-308 1.000000 70.3 atpI-rps2_p1 atpI-rps2 1 AACCCGTTTAGTGCGTTGAT TGTGAAGGGCGTTCTAGCTA 20 20 45.0 50.0 58.1 58.4 0.0 19.4 0.560535 15317 15600 361-491 1.000000 82.6 atpI-rps2_p2 atpI-rps2 2 AACCCGTTTAGTGCGTTGAT TTTGTGAAGGGCGTTCTAGC 20 20 45.0 50.0 58.1 58.5 0.0 19.4 0.593705 15317 15600 363-493 1.000000 82.3 atpI-rps2_p3 atpI-rps2 3 AACCCGTTTAGTGCGTTGAT GCAATTTGTGAAGGGCGTTC 20 20 45.0 50.0 58.1 58.6 0.0 12.8 0.694741 15317 15600 367-497 1.000000 81.4 atpI-rps2_p4 atpI-rps2 4 ATGTTGGCCTACTTCCACAC TGTGAAGGGCGTTCTAGCTA 20 20 50.0 50.0 57.8 58.4 18.3 19.4 0.647794 15317 15600 395-525 1.000000 81.3 atpI-rps2_p5 atpI-rps2 5 ATGTTGGCCTACTTCCACAC TTTGTGAAGGGCGTTCTAGC 20 20 50.0 50.0 57.8 58.5 18.3 19.4 0.680964 15317 15600 397-527 1.000000 81.0 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACCGCATTGTTCATTC 20 20 45.0 45.0 58.0 56.8 0.0 0.0 1.208847 29097 30170 1233-1269 1.000000 74.7 petN-psbM_p2 petN-psbM 2 TCTTGCTTGGGCTGCTTTAA TGCTACCGCATTGTTCATTCT 20 21 45.0 42.9 58.0 58.3 0.0 0.0 1.295667 29097 30170 1233-1269 1.000000 74.0 petN-psbM_p3 petN-psbM 3 AGTAAGTCTTGCTTGGGCTG TGCTACCGCATTGTTCATTC 20 20 50.0 45.0 57.8 56.8 0.0 0.0 1.393931 29097 30170 1239-1275 1.000000 73.2 petN-psbM_p4 petN-psbM 4 AGTAAGTCTTGCTTGGGCTG TGCTACCGCATTGTTCATTCT 20 21 50.0 42.9 57.8 58.3 0.0 0.0 1.480751 29097 30170 1239-1275 1.000000 72.5 petN-psbM_p5 petN-psbM 5 TCTTGCTTGGGCTGCTTTAA GCTACCGCATTGTTCATTCT 20 20 45.0 45.0 58.0 56.5 0.0 0.0 1.503900 29097 30170 1232-1268 1.000000 72.3 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 ACCCAAGAAGAGCCCATTTG GAACCGATGACTTACGCCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.077102 31178 32060 638-1130 1.000000 89.7 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 ACCCAAGAAGAGCCCATTTG TGGTGATTCCAGAGACGACT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.146401 31178 32060 892-1388 1.000000 88.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 AAACCGGAGTCAGAAGGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 58.0 58.0 9.5 0.0 0.017093 31178 32060 1260-1578 1.000000 88.1 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AAACCGGAGTCAGAAGGAGA TGGTGATTCCAGAGACGACT 20 20 50.0 50.0 58.0 58.1 9.5 0.0 0.086391 31178 32060 1505-1836 1.000000 87.5 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 AAACCGGAGTCAGAAGGAGA CCGATGACTTACGCCTTACC 20 20 50.0 55.0 58.0 58.2 9.5 0.0 0.162026 31178 32060 1257-1575 1.000000 87.0 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 AAAACCTGACCTGTTGACCC CGAAGCAGAGCGCAATAATG 20 20 50.0 50.0 57.9 58.0 0.0 11.5 0.082006 47108 47481 1047-1181 1.000000 87.1 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 AATAGTCGGAGCCATACCCA CGAAGCAGAGCGCAATAATG 20 20 50.0 50.0 57.9 58.0 0.0 11.5 0.111751 47108 47481 1111-1245 1.000000 86.7 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 ATAGTCGGAGCCATACCCAA CGAAGCAGAGCGCAATAATG 20 20 50.0 50.0 57.9 58.0 0.0 11.5 0.111751 47108 47481 1110-1244 1.000000 86.7 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 TAGTCGGAGCCATACCCAAT CGAAGCAGAGCGCAATAATG 20 20 50.0 50.0 57.9 58.0 0.0 11.5 0.111751 47108 47481 1109-1243 1.000000 86.7 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 GTTTAGGTCTGGCGCGAATA CGAAGCAGAGCGCAATAATG 20 20 50.0 50.0 58.1 58.0 12.1 11.5 0.084074 47108 47481 1407-1541 1.000000 86.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 AAAACCTGACCTGTTGACCC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.071989 47555 48327 1399-1533 1.000000 86.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 47555 48327 741-879 1.000000 85.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAAACCTGACCTGTTGACCC GGCTTTTTGGGGATAGAGGG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.140618 47555 48327 1974-2108 1.000000 85.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 AAAACCTGACCTGTTGACCC GGGCTTTTTGGGGATAGAGG 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.140618 47555 48327 1975-2109 1.000000 85.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 AAAACCTGACCTGTTGACCC GCTTCCATTGAGTCTCTGCA 20 20 50.0 50.0 57.9 57.9 0.0 0.6 0.172372 47555 48327 1580-1714 1.000000 85.5 accD-psaI_p1 accD-psaI 1 AAGCCGTTCAAACAGGCATA TTTTCGCGACCCCGTTATAG 20 20 45.0 50.0 58.1 58.1 21.8 9.1 0.170484 59409 59889 1438-1673 1.000000 85.0 accD-psaI_p2 accD-psaI 2 GATCCGGATACTTGGGATGC TTTTCGCGACCCCGTTATAG 20 20 55.0 50.0 57.9 58.1 19.1 9.1 0.175375 59409 59889 1562-1797 1.000000 84.9 accD-psaI_p3 accD-psaI 3 AAGCCGTTCAAACAGGCATA TGGGGCCCATCAGATCTAAA 20 20 45.0 50.0 58.1 58.1 21.8 24.8 0.189874 59409 59889 1129-1164 0.666667 70.0 accD-psaI_p4 accD-psaI 4 AAGCCGTTCAAACAGGCATA TTTACCCCCATTACCCCCAT 20 20 45.0 50.0 58.1 58.0 21.8 0.0 0.113869 59409 59889 1304-1304 0.166667 45.8 accD-psaI_p5 accD-psaI 5 GATCCGGATACTTGGGATGC TTTACCCCCATTACCCCCAT 20 20 55.0 50.0 57.9 58.0 19.1 0.0 0.118760 59409 59889 1428-1428 0.166667 45.7 rpl16_p1 rpl16 1 ACACATCAATTCTCGAGCCC ACTTGGCTTTCCCTTCGATC 20 20 50.0 50.0 58.0 57.9 7.8 0.0 0.145181 81808 83133 1634-1673 1.000000 83.0 rpl16_p2 rpl16 2 CTGACCACCTCTGATCTTGC ACTTGGCTTTCCCTTCGATC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.136698 81808 83133 1747-1786 1.000000 82.8 rpl16_p3 rpl16 3 GCATATCGACGATTGCTTGC ACTTGGCTTTCCCTTCGATC 20 20 50.0 50.0 58.1 57.9 24.8 0.0 0.172758 81808 83133 1669-1708 1.000000 82.7 rpl16_p4 rpl16 4 CAAAAGGGTCTGGGGTTGAA ACTTGGCTTTCCCTTCGATC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.195997 81808 83133 1595-1634 1.000000 82.5 rpl16_p5 rpl16 5 TTCAAAAGGGTCTGGGGTTG ACTTGGCTTTCCCTTCGATC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.195997 81808 83133 1597-1636 1.000000 82.5 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGACGGAAAAAGAAG AGGCTTTTGTCGATTGGGTT 20 20 50.0 45.0 58.0 58.0 20.5 0.0 0.037038 113066 113593 1323-2047 1.000000 87.5 ndhF-rpl32_p2 ndhF-rpl32 2 TGCCGACGGAAAAAGAAGAA AGGCTTTTGTCGATTGGGTT 20 20 45.0 45.0 58.0 58.0 20.5 0.0 0.048327 113066 113593 1321-2045 1.000000 87.4 ndhF-rpl32_p3 ndhF-rpl32 3 TTGCCGACGGAAAAAGAAGA AGGCTTTTGTCGATTGGGTT 20 20 45.0 45.0 58.0 58.0 20.5 0.0 0.048327 113066 113593 1322-2046 1.000000 87.4 ndhF-rpl32_p4 ndhF-rpl32 4 CCGTGTGAACCAAAACCCTA AGGCTTTTGTCGATTGGGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.034532 113066 113593 1729-2453 1.000000 86.4 ndhF-rpl32_p5 ndhF-rpl32 5 CCGTGTGAACCAAAACCCTA GGCTTTTGTCGATTGGGTTG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.094482 113066 113593 1728-2452 1.000000 86.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ATTTACCGGATCCTACCCCC AGCGTGTCTACCGATTTCAC 20 20 55.0 50.0 58.3 58.0 9.5 0.0 0.269357 113759 114684 1613-2340 1.000000 85.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ATTTACCGGATCCTACCCCC CAGCGTGTCTACCGATTTCA 20 20 55.0 50.0 58.3 58.0 9.5 0.0 0.270727 113759 114684 1614-2341 1.000000 85.7 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGGGATATTGGGCAGCCTTA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.2 58.0 12.4 0.0 0.174643 113759 114684 984-1061 0.833333 80.9 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGGATATTGGGCAGCCTTA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.2 58.0 12.4 0.0 0.176014 113759 114684 985-1062 0.833333 80.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGGGATATTGGGCAGCCTTA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 12.4 0.0 0.291090 113759 114684 994-1071 0.833333 79.9 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 GTGAAATCGGTAGACACGCT TGCTCTAAAGTTGAAAATATCAT 20 23 50.0 26.1 58.0 52.2 0.0 0.0 8.840083 114765 114868 196-198 1.000000 44.5 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 TGAAATCGGTAGACACGCTG ATGCTCTAAAGTTGAAAATATCA 20 23 50.0 26.1 58.0 52.2 0.0 0.0 8.841454 114765 114868 196-198 1.000000 44.5 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 TGAAATCGGTAGACACGCTG TGCTCTAAAGTTGAAAATATCAT 20 23 50.0 26.1 58.0 52.2 0.0 0.0 8.841454 114765 114868 195-197 1.000000 44.5 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 GTGAAATCGGTAGACACGCT ATGCTCTAAAGTTGAAAATATCA 20 23 50.0 26.1 58.0 52.2 0.0 0.0 8.840083 114765 114868 197-199 1.000000 44.4 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 TGAATTCGAACAAGCCGCTA TGCTCTAAAGTTGAAAATATCAT 20 23 45.0 26.1 57.9 52.2 0.0 0.0 8.919754 114765 114868 218-220 1.000000 44.0 psaC-ndhE_p1 psaC-ndhE 1 TACATCCGTCCCAGGGTATC GCGTTAATAGGTGCGATTGC 20 20 55.0 50.0 58.0 58.0 5.0 0.0 0.024087 117929 118213 933-953 1.000000 84.2 psaC-ndhE_p2 psaC-ndhE 2 CTGTTCTTGGAGCAGAAGCA GCGTTAATAGGTGCGATTGC 20 20 50.0 50.0 58.1 58.0 5.7 0.0 0.130502 117929 118213 966-986 1.000000 83.2 psaC-ndhE_p3 psaC-ndhE 3 AAATTACGGAGCCTGCGAAT GCGTTAATAGGTGCGATTGC 20 20 45.0 50.0 58.0 58.0 14.0 0.0 0.057104 117929 118213 1255-1275 1.000000 83.1 psaC-ndhE_p4 psaC-ndhE 4 AACCCGAACGCTCAAGAAAT GCGTTAATAGGTGCGATTGC 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.126508 117929 118213 1031-1051 1.000000 83.1 psaC-ndhE_p5 psaC-ndhE 5 CCTATTTGCCCGCTGTACAT GCGTTAATAGGTGCGATTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.051399 117929 118213 1571-1591 1.000000 82.6 ndhE_p1 ndhE 1 TACATCCGTCCCAGGGTATC GCGTTAATAGGTGCGATTGC 20 20 55.0 50.0 58.0 58.0 5.0 0.0 0.024087 118214 118519 933-953 1.000000 84.2 ndhE_p2 ndhE 2 TACATCCGTCCCAGGGTATC TTTCCTCTTTGGACCGTTGG 20 20 55.0 50.0 58.0 58.0 5.0 0.0 0.029711 118214 118519 1161-1181 1.000000 83.6 ndhE_p3 ndhE 3 AAATTACGGAGCCTGCGAAT GCGTTAATAGGTGCGATTGC 20 20 45.0 50.0 58.0 58.0 14.0 0.0 0.057104 118214 118519 1255-1275 1.000000 83.1 ndhE_p4 ndhE 4 TACATCCGTCCCAGGGTATC TCTTTCTGGGATCGGGTCTT 20 20 55.0 50.0 58.0 58.0 5.0 0.0 0.052749 118214 118519 1391-1411 1.000000 82.9 ndhE_p5 ndhE 5 AAATTACGGAGCCTGCGAAT TTTCCTCTTTGGACCGTTGG 20 20 45.0 50.0 58.0 58.0 14.0 0.0 0.062727 118214 118519 1483-1503 1.000000 82.7 ycf1_p1 ycf1 1 AGAACTCCGAGGTGTCGTAT TCCGGCCAAACTAACCAAAA 20 20 50.0 45.0 57.9 57.9 0.0 2.2 0.194607 126668 126787 720-747 1.000000 82.0 ycf1_p2 ycf1 2 AGAACTCCGAGGTGTCGTAT ACGCAAACGAACCTTACCTT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.168105 126668 126787 936-963 0.833333 75.2 ycf1_p3 ycf1 3 AGAACTCCGAGGTGTCGTAT AAAGATGTACGAATCCGGCC 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.176308 126668 126787 733-733 0.166667 45.3 ycf1_p4 ycf1 4 AGAACTCCGAGGTGTCGTAT CCTTTGGTTCTGTTCACCCA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.191672 126668 126787 920-920 0.166667 45.1 ycf1_p5 ycf1 5 AGAACTCCGAGGTGTCGTAT ACCTTTGGTTCTGTTCACCC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.193138 126668 126787 921-921 0.166667 45.1