primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 TGCTTTCTACCACAGCGTTT GGGTTTTGGTCCCGGTATTC 20 20 45.0 55.0 58.0 58.5 0.0 0.0 0.571350 5889 7126 1211-1345 1.000000 81.0 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TTGCTTTCTACCACAGCGTT GGGTTTTGGTCCCGGTATTC 20 20 45.0 55.0 58.0 58.5 0.0 0.0 0.571350 5889 7126 1212-1346 1.000000 81.0 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GGGTTTTGGTCCCGGTATTC 20 20 45.0 55.0 58.1 58.5 8.1 0.0 0.672468 5889 7126 1222-1356 1.000000 80.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TGCTTTCTACCACAGCGTTT TCGGAGGTTCGAATCCTTTC 20 20 45.0 50.0 58.0 57.3 0.0 16.9 0.705680 5889 7126 1193-1327 1.000000 80.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TTGCTTTCTACCACAGCGTT TCGGAGGTTCGAATCCTTTC 20 20 45.0 50.0 58.0 57.3 0.0 16.9 0.705680 5889 7126 1194-1328 1.000000 80.0 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 9685 9865 211-261 1.000000 69.5 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 9685 9865 214-264 1.000000 69.2 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 9685 9865 217-267 1.000000 68.7 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 9685 9865 220-270 1.000000 68.5 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 9685 9865 215-265 1.000000 67.0 rpoC1_p1 rpoC1 1 CCGTCCTAGTTGAATCGGAG TTGCTCGTTCGAGAACTACG 20 20 55.0 50.0 57.5 58.0 0.0 23.5 0.533966 20918 23715 2984-2993 1.000000 76.6 rpoC1_p2 rpoC1 2 CCGTCCTAGTTGAATCGGAG ACGATCTTTGGCTCTGGAAC 20 20 55.0 50.0 57.5 57.9 0.0 0.0 0.594318 20918 23715 2967-2976 1.000000 76.1 rpoC1_p3 rpoC1 3 CCGTCCTAGTTGAATCGGAG TTCGATTGCTCGTTCGAGAA 20 20 55.0 45.0 57.5 57.7 0.0 23.5 0.835031 20918 23715 2989-2998 1.000000 74.1 rpoC1_p4 rpoC1 4 CCGTCCTAGTTGAATCGGAG TTTCGATTGCTCGTTCGAGA 20 20 55.0 45.0 57.5 57.7 0.0 23.5 0.835031 20918 23715 2990-2999 1.000000 74.1 rpoC1_p5 rpoC1 5 CCGTCCTAGTTGAATCGGAG CGATTGCTCGTTCGAGAACT 20 20 55.0 50.0 57.5 58.4 0.0 23.5 0.874852 20918 23715 2987-2996 1.000000 73.8 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CCACGAACCTACAAAAGCCT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.189918 26955 28182 1365-1378 1.000000 80.2 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TCCACGAACCTACAAAAGCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.195241 26955 28182 1366-1379 1.000000 80.1 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 CCACGAACCTACAAAAGCCT TTATTGATCAGGCGACACCC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.433374 26955 28182 1383-1396 1.000000 78.2 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TCCACGAACCTACAAAAGCC TTATTGATCAGGCGACACCC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.438696 26955 28182 1384-1397 1.000000 78.2 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CCACGAACCTACAAAAGCCT AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.1 58.4 0.0 14.6 0.463281 26955 28182 1347-1360 1.000000 78.0 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGTTGCCTCCTTGAAAGAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.175803 31392 32167 816-893 1.000000 84.2 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 ATGTGCGCTTGGGAAACATA GAACCGATGACTTACGCCTT 20 20 45.0 50.0 58.2 58.0 9.7 0.0 0.173087 31392 32167 1480-1557 1.000000 83.8 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TATGTGCGCTTGGGAAACAT GAACCGATGACTTACGCCTT 20 20 45.0 50.0 58.2 58.0 9.7 0.0 0.173087 31392 32167 1481-1558 1.000000 83.8 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GTGTAGTACCCTACCCCCAG GAACCGATGACTTACGCCTT 20 20 60.0 50.0 58.2 58.0 0.0 0.0 0.220324 31392 32167 851-928 1.000000 83.7 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 ATGTGCGCTTGGGAAACATA TGGTGATTCCAGAGACGACT 20 20 45.0 50.0 58.2 58.1 9.7 0.0 0.242386 31392 32167 1794-1878 0.833333 76.4 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GGCGTAAGTCATCGGTTCAA AGACCGGACCATCCTACAAA 20 20 50.0 50.0 58.3 58.1 0.0 9.5 0.335822 32240 33733 1557-1636 1.000000 82.8 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GGCGTAAGTCATCGGTTCAA GAGCAATAGACCGGACCATC 20 20 50.0 55.0 58.3 57.8 0.0 9.5 0.439149 32240 33733 1564-1643 1.000000 81.9 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA AGAGCAATAGACCGGACCAT 20 20 50.0 50.0 58.3 58.2 0.0 9.5 0.488092 32240 33733 1565-1644 1.000000 81.6 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GGCGTAAGTCATCGGTTCAA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.3 58.2 0.0 0.0 0.528876 32240 33733 1542-1621 1.000000 81.3 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 58.3 57.6 0.0 0.0 0.677352 32240 33733 1541-1620 1.000000 80.1 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCAGGCCCTTTGTTAATCGG CCGAGAAAGTCTACGGTTCG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.230316 51529 52622 1207-1246 1.000000 82.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TAATCGGGGCTAAAACTCCG CCGAGAAAGTCTACGGTTCG 20 20 50.0 55.0 57.4 58.1 0.0 0.0 0.715163 51529 52622 1194-1233 1.000000 78.5 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TCAGGCCCTTTGTTAATCGG GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 57.9 58.7 0.0 0.0 0.806132 51529 52622 1192-1231 1.000000 77.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CCCTTTGTTAATCGGGGCTA CCGAGAAAGTCTACGGTTCG 20 20 50.0 55.0 57.3 58.1 0.0 0.0 0.828958 51529 52622 1202-1241 1.000000 77.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGGGCTAAAACTCCGGAAAC CCGAGAAAGTCTACGGTTCG 20 20 55.0 55.0 58.8 58.1 5.2 0.0 0.936224 51529 52622 1189-1228 1.000000 76.7 psaI-ycf4_p1 psaI-ycf4 1 GCAATGGCAATGGCTTCTTT TTTTCGCGACCCCGTTATAG 20 20 45.0 50.0 57.9 58.1 8.6 9.1 0.178308 60487 60903 513-527 1.000000 82.0 psaI-ycf4_p2 psaI-ycf4 2 GCAATGGCAATGGCTTCTTT GGATAATGGCCCAGCAGAAA 20 20 45.0 50.0 57.9 57.9 8.6 0.0 0.175315 60487 60903 541-555 1.000000 81.8 psaI-ycf4_p3 psaI-ycf4 3 GCAATGGCAATGGCTTCTTT AAAGGATAATGGCCCAGCAG 20 20 45.0 50.0 57.9 57.9 8.6 0.0 0.181224 60487 60903 544-558 1.000000 81.7 psaI-ycf4_p4 psaI-ycf4 4 AGTATTTCCGGCAATGGCAA TTTTCGCGACCCCGTTATAG 20 20 45.0 50.0 58.2 58.1 9.8 9.1 0.228764 60487 60903 523-537 1.000000 81.5 psaI-ycf4_p5 psaI-ycf4 5 AGTATTTCCGGCAATGGCAA GGATAATGGCCCAGCAGAAA 20 20 45.0 50.0 58.2 57.9 9.8 0.0 0.225771 60487 60903 551-565 1.000000 81.3 ycf4-cemA_p1 ycf4-cemA 1 CGAACAAAAAGCTGCCGAAT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.127121 61459 62125 798-820 1.000000 80.4 ycf4-cemA_p2 ycf4-cemA 2 AATCGAACAAAAAGCTGCCG GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.127121 61459 62125 801-823 1.000000 80.3 ycf4-cemA_p3 ycf4-cemA 3 TTGGCCTATTTCTTGCGTGT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.1 58.1 3.3 0.0 0.172357 61459 62125 779-801 1.000000 80.0 ycf4-cemA_p4 ycf4-cemA 4 TTGCGTGTACCGATTGAAGT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 7.8 0.0 0.234478 61459 62125 767-789 1.000000 79.6 ycf4-cemA_p5 ycf4-cemA 5 ACAAAAAGCTGCCGAATTGG GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.230011 61459 62125 795-817 1.000000 79.5 petA-psbJ_p1 petA-psbJ 1 CTTACGTGTCCAAGGCCTTT GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 58.1 58.1 17.6 0.0 1.201437 64018 65000 1149-1173 1.000000 74.9 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTGGC GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 57.8 58.1 0.0 0.0 1.248500 64018 65000 1136-1160 1.000000 74.6 petA-psbJ_p3 petA-psbJ 3 CTTACGTGTCCAAGGCCTTT AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 58.1 57.8 17.6 0.0 1.293037 64018 65000 1150-1174 1.000000 74.1 petA-psbJ_p4 petA-psbJ 4 GGCCTTTTGTTCTTCTTGGC AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 57.8 57.8 0.0 0.0 1.340100 64018 65000 1137-1161 1.000000 73.8 petA-psbJ_p5 petA-psbJ 5 GATCCCTTACGTGTCCAAGG GCTGGTATTCTTGTGATCGGT 20 21 55.0 47.6 57.7 58.1 7.7 0.0 1.404770 64018 65000 1154-1178 1.000000 73.2 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA GGTTACCGTTAAAGCCGCTA 20 20 50.0 50.0 57.9 58.0 6.4 0.0 0.060086 65782 66789 1159-1175 1.000000 81.5 psbE-petL_p2 psbE-petL 2 ACTGACGAATAACCAACCCG GGTTACCGTTAAAGCCGCTA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.097701 65782 66789 1172-1188 1.000000 81.2 psbE-petL_p3 psbE-petL 3 CAACCCGCAATGAATAGGGA TGAGGTTACCGTTAAAGCCG 20 20 50.0 50.0 57.9 57.9 6.4 0.0 0.134501 65782 66789 1162-1178 1.000000 80.9 psbE-petL_p4 psbE-petL 4 AGAACGTTCTCCTGTGCTTC GGTTACCGTTAAAGCCGCTA 20 20 50.0 50.0 57.8 58.0 24.9 0.0 0.165095 65782 66789 1082-1098 1.000000 80.8 psbE-petL_p5 psbE-petL 5 ACTGACGAATAACCAACCCG TGAGGTTACCGTTAAAGCCG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.172116 65782 66789 1175-1191 1.000000 80.6 clpP-psbB_p1 clpP-psbB 1 GCACTATACGTCAACCCAGG CGATACCAAGGCAAACCCAT 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.301360 72940 73390 512-547 1.000000 82.2 clpP-psbB_p2 clpP-psbB 2 CAGGACTTCGAAAAGGCACT CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.353057 72940 73390 477-512 1.000000 81.8 clpP-psbB_p3 clpP-psbB 3 GTCAACCCAGGATGCATCTT CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 57.9 58.2 25.3 0.0 0.372081 72940 73390 503-538 1.000000 81.6 clpP-psbB_p4 clpP-psbB 4 AGGCACTTTTGGAACACCAA CGATACCAAGGCAAACCCAT 20 20 45.0 50.0 58.1 58.2 0.0 0.0 0.377991 72940 73390 464-499 1.000000 81.6 clpP-psbB_p5 clpP-psbB 5 CGGGGAAATACCGTATGACC CGATACCAAGGCAAACCCAT 20 20 55.0 50.0 57.8 58.2 0.0 0.0 0.396620 72940 73390 550-585 1.000000 81.4 rps12-trnV_p1 rps12-trnV 1 GCAACTTTACGTAGGGCAGA GATGACTTCCACCACGTCAA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.252768 98710 100578 1930-1963 1.000000 81.4 rps12-trnV_p2 rps12-trnV 2 GCAACTTTACGTAGGGCAGA AACTGATGACTTCCACCACG 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.258782 98710 100578 1934-1967 1.000000 81.4 rps12-trnV_p3 rps12-trnV 3 GCAACTTTACGTAGGGCAGA ATGACTTCCACCACGTCAAG 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.258782 98710 100578 1929-1962 1.000000 81.4 rps12-trnV_p4 rps12-trnV 4 CGTAGGGCAGAGTTTGGTTT GATGACTTCCACCACGTCAA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.271608 98710 100578 1921-1954 1.000000 81.3 rps12-trnV_p5 rps12-trnV 5 CGTAGGGCAGAGTTTGGTTT ATGACTTCCACCACGTCAAG 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.277623 98710 100578 1920-1953 1.000000 81.3 trnV-rrn16_p1 trnV-rrn16 1 TGAGTTTCTCGACCCTTTGC CCGACTTGCATGTGTTAAGC 20 20 50.0 50.0 58.1 57.8 0.0 10.4 0.368358 100637 102448 413-2071 1.000000 83.2 trnV-rrn16_p2 trnV-rrn16 2 TTGACGTGGTGGAAGTCATC CCGACTTGCATGTGTTAAGC 20 20 50.0 50.0 57.8 57.8 0.0 10.4 0.411129 100637 102448 323-1981 1.000000 83.0 trnV-rrn16_p3 trnV-rrn16 3 CGTGGTGGAAGTCATCAGTT CCGACTTGCATGTGTTAAGC 20 20 50.0 50.0 57.8 57.8 0.0 10.4 0.417143 100637 102448 319-1977 1.000000 83.0 trnV-rrn16_p4 trnV-rrn16 4 CTTGACGTGGTGGAAGTCAT CCGACTTGCATGTGTTAAGC 20 20 50.0 50.0 57.8 57.8 0.0 10.4 0.417143 100637 102448 324-1982 1.000000 83.0 trnV-rrn16_p5 trnV-rrn16 5 TGAGTTTCTCGACCCTTTGC GCAGGTTCTTACGCGTTACT 20 20 50.0 50.0 58.1 58.3 0.0 20.8 0.414604 100637 102448 466-2124 1.000000 82.8 ndhF_p1 ndhF 1 TTGAGGCTCTAGATACGGGA GGGGGTAGGATCCGGTAAAT 20 20 50.0 55.0 57.0 58.3 16.7 6.0 1.305993 113034 115271 2878-2939 1.000000 72.8 ndhF_p2 ndhF 2 AATTGGAAGGGCCTCTCTTT GGGGGTAGGATCCGGTAAAT 20 20 45.0 55.0 56.7 58.3 6.5 6.0 1.569507 113034 115271 2522-2583 1.000000 71.1 ndhF_p3 ndhF 3 AAATTGGAAGGGCCTCTCTT GGGGGTAGGATCCGGTAAAT 20 20 45.0 55.0 56.7 58.3 6.5 6.0 1.569507 113034 115271 2523-2584 1.000000 71.0 ndhF_p4 ndhF 4 TGAGGCTCTAGATACGGGAT GGGGGTAGGATCCGGTAAAT 20 20 50.0 55.0 56.7 58.3 16.7 6.0 1.539463 113034 115271 2877-2938 1.000000 70.9 ndhF_p5 ndhF 5 CGAGTTTAAATTGGAAGGGCC GGGGGTAGGATCCGGTAAAT 21 20 47.6 55.0 57.5 58.3 0.0 6.0 1.765353 113034 115271 2530-2591 1.000000 69.5 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGGGATATTGGGCAGCCTTA AGCGTGTCTACCGATTTCAC 20 20 50.0 50.0 58.2 58.0 12.4 0.0 0.174643 116374 117292 1041-1057 1.000000 82.1 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGGGATATTGGGCAGCCTTA CAGCGTGTCTACCGATTTCA 20 20 50.0 50.0 58.2 58.0 12.4 0.0 0.176014 116374 117292 1042-1058 1.000000 82.1 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGGGATATTGGGCAGCCTTA CTCGCACTGCTTCCTAAGAG 20 20 50.0 55.0 58.2 58.1 12.4 0.0 0.246895 116374 117292 1062-1078 1.000000 81.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGGATATTGGGCAGCCTTA CTCTCGCACTGCTTCCTAAG 20 20 50.0 55.0 58.2 58.1 12.4 0.0 0.246895 116374 117292 1064-1080 1.000000 81.5 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGGGATATTGGGCAGCCTTA TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 12.4 0.0 0.291090 116374 117292 1051-1067 1.000000 81.2