primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCCTTTCAGGATCAGTCGTG AAAAGGGTATGTTGCTGCCA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.023978 4256 5156 1392-1866 0.926966 88.9 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCTTTCAGGATCAGTCGTGG AAAAGGGTATGTTGCTGCCA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.023978 4256 5156 1391-1865 0.926966 88.9 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCCTTTCAGGATCAGTCGTG CCCAATGAGCCGTTTATCGA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.067632 4256 5156 882-1285 0.853933 85.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCTTTCAGGATCAGTCGTGG CCCAATGAGCCGTTTATCGA 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.067632 4256 5156 881-1284 0.853933 85.6 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCTTTCAGGATCAGTCGTGG TCCCAATGAGCCGTTTATCG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.067632 4256 5156 882-1285 0.853933 85.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 7.8 16.9 0.156387 6320 7064 723-1275 1.000000 90.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6320 7064 706-1258 1.000000 90.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 CAACGGATCGTGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 7.8 16.9 0.285346 6320 7064 724-1276 1.000000 89.7 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AGCACCCTCATTCCTAGACA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.7 58.1 0.0 16.9 0.330253 6320 7064 772-1324 1.000000 89.4 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6320 7064 720-1272 1.000000 88.4 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA AACCGAAAGACCCTTTAACT 20 20 50.0 40.0 58.0 54.5 0.0 0.0 3.519820 8344 9043 665-887 1.000000 63.8 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC AACCGAAAGACCCTTTAACT 20 20 50.0 40.0 58.0 54.5 0.0 0.0 3.521208 8344 9043 664-886 1.000000 63.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 8344 9043 629-851 1.000000 63.7 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 8344 9043 628-850 1.000000 63.7 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ACGGAAAGAGAGGGATTCGA AACCGAAAGACCCTTTAACT 20 20 50.0 40.0 58.2 54.5 0.0 0.0 3.666586 8344 9043 719-941 1.000000 62.7 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TTGTCTCATTTGCATCCCCG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 58.5 58.1 0.0 0.0 0.619512 27012 28171 1044-1269 0.988764 86.6 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TTGTCTCATTTGCATCCCCG AAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.5 58.4 0.0 14.6 0.892875 27012 28171 1026-1251 0.988764 84.4 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 GTCTCATTTGCATCCCCGAG CCGGATTTGAACTGGGGAAA 20 20 55.0 50.0 58.7 58.1 0.0 0.0 0.778819 27012 28171 1042-1267 0.966292 84.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CAAACCCTGATCGATGAACCT CCGGATTTGAACTGGGGAAA 21 20 47.6 50.0 58.0 58.1 0.5 0.0 1.090878 27012 28171 1112-1337 1.000000 83.3 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 GTCTCATTTGCATCCCCGAG AAAAGGATTTGCAGTCCCCC 20 20 55.0 50.0 58.7 58.4 0.0 14.6 1.052182 27012 28171 1024-1249 0.966292 82.2 petN-psbM_p1 petN-psbM 1 ACTCGTAGTGTGGGGAAGAA CAGTCCCGACGGATCAAAAT 20 20 50.0 50.0 58.0 58.0 0.0 17.5 0.029546 29047 30062 1505-1810 1.000000 91.8 petN-psbM_p2 petN-psbM 2 TCGTAGTGTGGGGAAGAAGT CAGTCCCGACGGATCAAAAT 20 20 50.0 50.0 58.0 58.0 0.0 17.5 0.029546 29047 30062 1503-1808 1.000000 91.8 petN-psbM_p3 petN-psbM 3 ACTCGTAGTGTGGGGAAGAA GTCCCGACGGATCAAAATCA 20 20 50.0 50.0 58.0 58.0 0.0 17.5 0.023912 29047 30062 1503-1808 0.994382 91.6 petN-psbM_p4 petN-psbM 4 TCGTAGTGTGGGGAAGAAGT GTCCCGACGGATCAAAATCA 20 20 50.0 50.0 58.0 58.0 0.0 17.5 0.023912 29047 30062 1501-1806 0.994382 91.6 petN-psbM_p5 petN-psbM 5 TCGTAGTGTGGGGAAGAAGT AATTTTCTGCTCGATCCCCC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.063963 29047 30062 1602-1907 0.617978 76.2 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG CCGCAACCAGTCATCCATAA 20 20 55.0 50.0 58.1 58.0 7.6 0.0 0.101025 31743 33047 1234-1583 1.000000 91.2 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA CCGCAACCAGTCATCCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.123180 31743 33047 1237-1586 1.000000 91.0 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG GACAAAAACGAAACGGTCCC 20 20 55.0 50.0 58.1 57.9 7.6 0.0 0.173676 31743 33047 1255-1604 1.000000 90.6 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 TCAGTGGTAGAGTAACGCCA GACAAAAACGAAACGGTCCC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.195831 31743 33047 1258-1607 1.000000 90.4 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 31743 33047 1254-1603 1.000000 89.5 trnG-GCC-trnfM-CAU_p1 trnG-GCC-trnfM-CAU 1 AGAAGATGCGGGTTCGATTC GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.084264 36660 36806 242-292 1.000000 91.3 trnG-GCC-trnfM-CAU_p2 trnG-GCC-trnfM-CAU 2 GAGAAGATGCGGGTTCGATT GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.084264 36660 36806 243-293 1.000000 91.3 trnG-GCC-trnfM-CAU_p3 trnG-GCC-trnfM-CAU 3 AGAAGATGCGGGTTCGATTC CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 58.1 58.0 0.0 4.2 0.096882 36660 36806 206-256 1.000000 91.2 trnG-GCC-trnfM-CAU_p4 trnG-GCC-trnfM-CAU 4 GAGAAGATGCGGGTTCGATT CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 58.1 58.0 0.0 4.2 0.096882 36660 36806 207-257 1.000000 91.2 trnG-GCC-trnfM-CAU_p5 trnG-GCC-trnfM-CAU 5 ATGCGGATATGGTCGAATGG GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.124730 36660 36806 283-333 1.000000 91.0 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 TCTCCTGAGGTTGTCGGAAT CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.155778 44565 45447 502-1066 1.000000 90.8 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 TCTCCTGAGGTTGTCGGAAT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.212764 44565 45447 523-1087 1.000000 90.3 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 TCTCCTGAGGTTGTCGGAAT TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 58.1 57.8 0.0 5.6 0.254079 44565 45447 473-1037 1.000000 90.0 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 TTCTCCTGAGGTTGTCGGAA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.382307 44565 45447 503-1067 1.000000 88.9 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTTCTCCTGAGGTTGTCGGA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.382307 44565 45447 504-1068 1.000000 88.9 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG GTCTACCGATTTCGCCACAT 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.196808 46830 47509 673-757 1.000000 90.4 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG GTTTCCCACATCAAGGCTCA 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.223040 46830 47509 712-796 1.000000 90.2 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT GTCTACCGATTTCGCCACAT 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.304561 46830 47509 705-789 1.000000 89.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT GTTTCCCACATCAAGGCTCA 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.330794 46830 47509 744-828 1.000000 89.4 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG TCTACCGATTTCGCCACATC 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.351693 46830 47509 672-756 1.000000 89.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAAATAGGAATAAGACTTGA CCGAGAAAGTCTACGGTTCG 24 20 33.3 55.0 56.3 58.1 0.0 0.0 5.764085 50764 51748 550-1128 1.000000 52.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAAATAGGAATAAGACTTG CCGAGAAAGTCTACGGTTCG 23 20 34.8 55.0 54.9 58.1 0.0 0.0 6.163964 50764 51748 550-1128 1.000000 52.0 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ATGCCAAAATAGGAATAAGACTTGA CCGAGAAAGTCTACGGTTCG 25 20 32.0 55.0 56.8 58.1 0.0 0.0 6.305861 50764 51748 551-1129 1.000000 52.0 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAAATAGGAATAAGACTTGAT CCGAGAAAGTCTACGGTTCG 25 20 32.0 55.0 56.8 58.1 0.0 0.0 6.305861 50764 51748 550-1128 1.000000 52.0 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAAATAGGAATAAGACTTGA GTTCGAGTCCGTATAGCCCT 24 20 33.3 55.0 56.3 58.7 0.0 0.0 6.339901 50764 51748 535-1113 0.994382 51.8 rbcL-accD_p1 rbcL-accD 1 TTGAATGCTACTGCGGGTAC ACTATTCTTCGCGTGGGTTC 20 20 50.0 50.0 58.0 58.0 0.0 5.8 0.024512 56965 57677 2030-2088 0.983146 91.1 rbcL-accD_p2 rbcL-accD 2 TCATGGTATGCACTTCCGTG ACTATTCTTCGCGTGGGTTC 20 20 50.0 50.0 58.0 58.0 15.5 5.8 0.028735 56965 57677 1830-1888 0.983146 91.1 rbcL-accD_p3 rbcL-accD 3 GAGGCTAGCAAATGGAGTCC ACTATTCTTCGCGTGGGTTC 20 20 55.0 50.0 58.0 58.0 18.2 5.8 0.045554 56965 57677 1409-1467 0.983146 91.0 rbcL-accD_p4 rbcL-accD 4 TCTTCACATTCACCGTGCAA ACTATTCTTCGCGTGGGTTC 20 20 45.0 50.0 58.0 58.0 0.0 5.8 0.045554 56965 57677 1878-1936 0.983146 91.0 rbcL-accD_p5 rbcL-accD 5 TTCTTCACATTCACCGTGCA ACTATTCTTCGCGTGGGTTC 20 20 45.0 50.0 58.0 58.0 0.0 5.8 0.045554 56965 57677 1879-1937 0.983146 91.0 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 63478 64484 821-1124 1.000000 86.7 petA-psbJ_p2 petA-psbJ 2 GAGAAGGTTCAATTGGCCGA CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 63478 64484 820-1123 1.000000 86.2 petA-psbJ_p3 petA-psbJ 3 AGAAGGTTCAATTGGCCGAA TCCGGATTAGGTTCATCCCT 20 20 45.0 50.0 57.7 57.5 5.4 0.0 0.775892 63478 64484 820-1123 1.000000 85.8 petA-psbJ_p4 petA-psbJ 4 TCGAGAAGGTTCAATTGGCC TCCGGATTAGGTTCATCCCT 20 20 50.0 50.0 58.2 57.5 5.4 0.0 0.668311 63478 64484 823-1126 0.926966 83.7 petA-psbJ_p5 petA-psbJ 5 TCGAGAAGGTTCAATTGGCC CCGGATTAGGTTCATCCCTG 20 20 50.0 55.0 58.2 57.4 5.4 0.0 0.729614 63478 64484 822-1125 0.926966 83.2 rpl20-rps12_p1 rpl20-rps12 1 TGAATGAGACCCCCGAAAAC ACAGCCCATTCGAAATGTCA 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.393028 69147 69940 952-975 0.994382 88.4 rpl20-rps12_p2 rpl20-rps12 2 ATGAGACCCCCGAAAACTTG ACAGCCCATTCGAAATGTCA 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.399200 69147 69940 949-972 0.994382 88.3 rpl20-rps12_p3 rpl20-rps12 3 TGAATGAGACCCCCGAAAAC ACAAGACAGCCCATTCGAAA 20 20 50.0 45.0 57.8 57.7 0.0 0.0 0.464553 69147 69940 957-980 1.000000 88.0 rpl20-rps12_p4 rpl20-rps12 4 ATGAGACCCCCGAAAACTTG ACAAGACAGCCCATTCGAAA 20 20 50.0 45.0 57.8 57.7 0.0 0.0 0.470725 69147 69940 954-977 1.000000 88.0 rpl20-rps12_p5 rpl20-rps12 5 CGGGCTATATATCCGCGTTT ACAGCCCATTCGAAATGTCA 20 20 50.0 45.0 57.7 57.8 4.9 0.0 0.487788 69147 69940 897-920 0.994382 87.8 ndhF_p1 ndhF 1 GCTCGGGTTATGGAAGAAGG GAGGTAAGGTCCGGTGAATC 20 20 55.0 55.0 58.0 57.4 0.0 0.0 0.643759 109156 111417 2880-2965 0.977528 83.2 ndhF_p2 ndhF 2 AGGGCCCTCTTATCTCTTCC GAGGTAAGGTCCGGTGAATC 20 20 55.0 55.0 57.9 57.4 22.3 0.0 0.709439 109156 111417 2908-2993 0.977528 82.7 ndhF_p3 ndhF 3 GGGCCCTCTTATCTCTTCCT GAGGTAAGGTCCGGTGAATC 20 20 55.0 55.0 57.9 57.4 17.0 0.0 0.709439 109156 111417 2907-2992 0.977528 82.7 ndhF_p4 ndhF 4 TCGTTGTGGTCGGACTCTAT GAGGTAAGGTCCGGTGAATC 20 20 50.0 55.0 58.2 57.4 8.2 0.0 0.768407 109156 111417 2954-2994 0.971910 82.0 ndhF_p5 ndhF 5 GCTCGGGTTATGGAAGAAGG TCAAAGGAGGTAAGGTCCGG 20 20 55.0 55.0 58.0 58.7 0.0 0.0 0.772266 109156 111417 2912-2971 0.786517 73.7 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TGTACGACAAACGAATAAACT TCCTAAGAGCAGCGTGTCTA 21 20 33.3 50.0 53.6 57.9 0.0 0.0 5.554971 111922 112367 334-699 1.000000 52.0 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TGTACGACAAACGAATAAACT AGCAGCGTGTCTACCAATTT 21 20 33.3 45.0 53.6 57.8 0.0 0.0 5.615698 111922 112367 327-692 1.000000 52.0 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TGTACGACAAACGAATAAACT CCTAAGAGCAGCGTGTCTAC 21 20 33.3 55.0 53.6 57.8 0.0 0.0 5.626989 111922 112367 333-698 1.000000 52.0 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TGTACGACAAACGAATAAACT CTAAGAGCAGCGTGTCTACC 21 20 33.3 55.0 53.6 57.8 0.0 0.0 5.626989 111922 112367 332-697 1.000000 52.0 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TGTACGACAAACGAATAAACT GAGCAGCGTGTCTACCAATT 21 20 33.3 50.0 53.6 58.3 0.0 0.0 5.703840 111922 112367 328-693 1.000000 52.0 psaC-ndhE_p1 psaC-ndhE 1 TACATCCGTCCCAGGGTATC GCTATTGGACCGGCTATTGT 20 20 55.0 50.0 58.0 57.7 5.0 0.0 0.261487 115656 115910 420-449 0.983146 89.2 psaC-ndhE_p2 psaC-ndhE 2 TACATCCGTCCCAGGGTATC TAACTATTGCAGCCGCTGAA 20 20 55.0 45.0 58.0 57.6 5.0 24.8 0.400300 115656 115910 443-472 1.000000 88.8 psaC-ndhE_p3 psaC-ndhE 3 TCCGTCCCAGGGTATCATTT GCTATTGGACCGGCTATTGT 20 20 50.0 50.0 58.1 57.7 5.0 0.0 0.368320 115656 115910 416-445 0.983146 88.4 psaC-ndhE_p4 psaC-ndhE 4 ATCCGTCCCAGGGTATCATT GCTATTGGACCGGCTATTGT 20 20 50.0 50.0 57.9 57.7 5.0 0.0 0.374521 115656 115910 417-446 0.983146 88.3 psaC-ndhE_p5 psaC-ndhE 5 CTAATACATCGGTGGGGCAC GCTATTGGACCGGCTATTGT 20 20 55.0 50.0 58.1 57.7 0.0 0.0 0.377164 115656 115910 396-425 0.971910 87.9 ycf1_p1 ycf1 1 GCCTTTCCATTGACTCGGAT GCTCGGGTTATGGAAGAAGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.089196 126418 126537 680-815 0.837079 84.8 ycf1_p2 ycf1 2 GCCTTTCCATTGACTCGGAT AGGGCCCTCTTATCTCTTCC 20 20 50.0 55.0 58.0 57.9 0.0 22.3 0.154876 126418 126537 708-843 0.837079 84.2 ycf1_p3 ycf1 3 GCCTTTCCATTGACTCGGAT GGGCCCTCTTATCTCTTCCT 20 20 50.0 55.0 58.0 57.9 0.0 17.0 0.154876 126418 126537 707-842 0.837079 84.2 ycf1_p4 ycf1 4 GCCTTTCCATTGACTCGGAT TCGTTGTGGTCGGACTCTAT 20 20 50.0 50.0 58.0 58.2 0.0 8.2 0.213844 126418 126537 754-889 0.837079 83.8 ycf1_p5 ycf1 5 GCCTTTCCATTGACTCGGAT AGAAGGGGGAAGAAACCTCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.177981 126418 126537 181-187 0.314607 63.0