Hotspot

trnM(CAU)-trnL(UAA)

LSC · 48458-49126 · 669 bp

Back to Schrebera

Pi 0.0095
MarkerSeek score 51.20
Primer available yes
Label trnM(CAU)-trnL(UAA)

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnM(CAU)-trnL(UAA)_p1 TGAAGGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 771-790 bp 1.0 81.3
trnM(CAU)-trnL(UAA)_p2 TGAAGGAAAAGCCGGCTATC TAGCGTCTACCAATTTCGCC 50.0 50.0 58.0 58.1 779-798 bp 1.0 80.8
trnM(CAU)-trnL(UAA)_p3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 719-738 bp 1.0 80.7
trnM(CAU)-trnL(UAA)_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 727-746 bp 1.0 80.1
trnM(CAU)-trnL(UAA)_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 751-770 bp 1.0 79.7