primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 96 490 457-461 1.000000 81.2 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.199180 96 490 471-475 1.000000 81.1 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 96 490 470-474 1.000000 81.1 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 96 490 472-476 1.000000 81.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 96 490 460-464 1.000000 81.1 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4372 5188 947-949 1.000000 79.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4372 5188 946-948 1.000000 79.0 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAAGACCATAGCCGCACTT AAAAAGGCGCTCAACCTACA 20 20 45.0 45.0 57.8 58.0 0.0 7.6 0.224713 4372 5188 968-970 1.000000 78.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CCGCACTTAAAAGCCGAGTA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 5.3 7.6 0.307146 4372 5188 956-958 1.000000 78.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT CTTGAAAAAGGCGCTCAACC 20 20 50.0 50.0 58.2 58.2 20.3 7.6 0.397463 4372 5188 950-952 1.000000 77.4 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 AGTTCTTCCATCAAGCCTTGA TTGTTAATCAGGCGACACCC 21 20 42.9 50.0 57.2 58.2 10.0 0.0 1.979613 27829 28976 1307-1308 1.000000 64.7 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TGAAGTTCTTCCATCAAGCCT TTGTTAATCAGGCGACACCC 21 20 42.9 50.0 57.2 58.2 4.2 0.0 1.979613 27829 28976 1310-1311 1.000000 64.7 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 AGTTCTTCCATCAAGCCTTGA CTGGGGAGAAAGGATTTGCA 21 20 42.9 50.0 57.2 57.8 10.0 0.0 2.016340 27829 28976 1278-1279 1.000000 64.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 AGTTCTTCCATCAAGCCTTGA TGGGGAGAAAGGATTTGCAG 21 20 42.9 50.0 57.2 57.8 10.0 0.0 2.016340 27829 28976 1277-1278 1.000000 64.4 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TGAAGTTCTTCCATCAAGCCT TGGGGAGAAAGGATTTGCAG 21 20 42.9 50.0 57.2 57.8 4.2 0.0 2.016340 27829 28976 1280-1281 1.000000 64.4 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGAATGAACAACGCAGTAGCA AGTTCAATCGGTCAGAGCAC 21 20 42.9 50.0 58.2 57.9 0.0 0.0 1.319742 31363 32360 1108-1111 1.000000 70.7 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 GAATGAACAACGCAGTAGCA AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 56.7 57.9 0.0 0.0 1.336812 31363 32360 1107-1110 1.000000 70.5 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 GAATGAACAACGCAGTAGCAA AGTTCAATCGGTCAGAGCAC 21 20 42.9 50.0 57.5 57.9 0.0 0.0 1.622212 31363 32360 1107-1110 1.000000 68.2 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGAATGAACAACGCAGTAGC AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 56.5 57.9 0.0 0.0 1.630110 31363 32360 1108-1111 1.000000 68.2 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AATGAACAACGCAGTAGCAA AGTTCAATCGGTCAGAGCAC 20 20 40.0 50.0 56.3 57.9 0.0 0.0 1.813464 31363 32360 1106-1109 1.000000 66.7 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CATGATCAACCCCCTTTCGT GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.134741 32959 33679 870-872 1.000000 79.5 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CAACCCCCTTTCGTCTTACC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.2 58.0 0.0 0.0 0.188613 32959 33679 864-866 1.000000 79.0 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CATGATCAACCCCCTTTCGT CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.192838 32959 33679 849-851 1.000000 79.0 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 CATGATCAACCCCCTTTCGT TGGCGTTACTCTACCACTGA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.214993 32959 33679 846-848 1.000000 78.8 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CAACCCCCTTTCGTCTTACC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.246710 32959 33679 843-845 1.000000 78.6 psbC_p1 psbC 1 TTCGTTTCCCAGGAAATCCG TCATGCATTTGATCTCCTGTC 20 21 50.0 42.9 58.2 56.0 14.7 0.0 3.156661 36208 37629 1558-1558 1.000000 54.9 psbC_p2 psbC 2 GCAGCGGAAGATCCTGAATT TCATGCATTTGATCTCCTGTC 20 21 50.0 42.9 58.3 56.0 0.6 0.0 3.299567 36208 37629 1537-1537 1.000000 53.8 psbC_p3 psbC 3 AGGTATTCGTGCTTGGATGG TCATGCATTTGATCTCCTGTC 20 21 50.0 42.9 57.7 56.0 0.0 0.0 3.304798 36208 37629 1481-1481 1.000000 53.7 psbC_p4 psbC 4 TTCGTTTCCCAGGAAATCCG CTTCATGCATTTGATCTCCTGTC 20 23 50.0 43.5 58.2 57.8 14.7 0.0 3.355073 36208 37629 1560-1560 1.000000 53.3 psbC_p5 psbC 5 TTCGTTTCCCAGGAAATCCG TTCATGCATTTGATCTCCTGTC 20 22 50.0 40.9 58.2 56.8 14.7 0.0 3.424770 36208 37629 1559-1559 1.000000 52.8 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 TCTCCTGAGGTTGTCGGAAT TTGTGGTCGGTTGGTGAATT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.121466 46706 47514 1022-1022 1.000000 79.3 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 TCTCCTGAGGTTGTCGGAAT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.212764 46706 47514 992-992 1.000000 78.6 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 TCTCCTGAGGTTGTCGGAAT TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 58.1 57.8 0.0 5.6 0.254079 46706 47514 942-942 1.000000 78.3 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 TCTCCTGAGGTTGTCGGAAT ATTGTGGTCGGTTGGTGAAT 20 20 50.0 45.0 58.1 57.7 0.0 0.0 0.347780 46706 47514 1023-1023 1.000000 77.5 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTCTCCTGAGGTTGTCGGAA TTGTGGTCGGTTGGTGAATT 20 20 50.0 45.0 58.3 57.9 0.0 0.0 0.347994 46706 47514 1023-1023 1.000000 77.5 petA-psbJ_p1 petA-psbJ 1 ACGTGTCCAAGGTTTGTTGT GGCTCATATTCCGGATTGGG 20 20 45.0 55.0 58.2 58.2 0.0 4.1 0.344636 66363 67498 1257-1281 1.000000 83.1 petA-psbJ_p2 petA-psbJ 2 ACGTGTCCAAGGTTTGTTGT CGGCTCATATTCCGGATTGG 20 20 45.0 55.0 58.2 58.6 0.0 4.1 0.728252 66363 67498 1258-1282 1.000000 80.0 petA-psbJ_p3 petA-psbJ 3 ACGTGTCCAAGGTTTGTTGT GCTCATATTCCGGATTGGGA 20 20 45.0 50.0 58.2 57.1 0.0 4.1 1.030186 66363 67498 1256-1280 1.000000 77.6 petA-psbJ_p4 petA-psbJ 4 ACGTGTCCAAGGTTTGTTGT ATTCCGGATTGGGATCATCC 20 20 45.0 50.0 58.2 57.1 0.0 4.1 1.058172 66363 67498 1250-1274 1.000000 77.4 petA-psbJ_p5 petA-psbJ 5 CGTGTCCAAGGTTTGTTGTT GGCTCATATTCCGGATTGGG 20 20 45.0 55.0 57.1 58.2 0.0 4.1 1.105127 66363 67498 1256-1280 1.000000 77.0 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AAGCAGCCAGTAGAAAACCG 20 20 50.0 50.0 57.9 58.5 6.4 0.0 0.527577 68268 69511 1391-1424 1.000000 75.9 psbE-petL_p2 psbE-petL 2 CAACCCGCAATGAATAGGGA GCAGCCAGTAGAAAACCGAA 20 20 50.0 50.0 57.9 58.5 6.4 0.0 0.531926 68268 69511 1389-1422 1.000000 75.9 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AAGCAGCCAGTAGAAAACCG 20 20 45.0 50.0 58.2 58.5 0.0 0.0 0.647263 68268 69511 1400-1433 1.000000 75.0 psbE-petL_p4 psbE-petL 4 ACGAATAACCAACCCGCAAT GCAGCCAGTAGAAAACCGAA 20 20 45.0 50.0 58.2 58.5 0.0 0.0 0.651612 68268 69511 1398-1431 1.000000 75.0 psbE-petL_p5 psbE-petL 5 TGCTGACGAATAACCAACCC AAGCAGCCAGTAGAAAACCG 20 20 50.0 50.0 58.2 58.5 0.0 0.0 0.660168 68268 69511 1405-1438 1.000000 74.9 clpP-psbB_p1 clpP-psbB 1 CTTTTGGAACACCAATGGGC ATATGGACAGAAAGCAGCCG 20 20 50.0 50.0 57.8 58.0 3.6 0.0 0.209284 75561 75988 521-521 1.000000 78.9 clpP-psbB_p2 clpP-psbB 2 ACCCAAACTGCATCTTCCTC ATATGGACAGAAAGCAGCCG 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.247535 75561 75988 561-561 1.000000 78.6 clpP-psbB_p3 clpP-psbB 3 ATACGTCAACCCAAACTGCA ATATGGACAGAAAGCAGCCG 20 20 45.0 50.0 57.7 58.0 0.0 0.0 0.304963 75561 75988 569-569 1.000000 78.1 clpP-psbB_p4 clpP-psbB 4 TACGTCAACCCAAACTGCAT ATATGGACAGAAAGCAGCCG 20 20 45.0 50.0 57.7 58.0 0.0 0.0 0.304963 75561 75988 568-568 1.000000 78.1 clpP-psbB_p5 clpP-psbB 5 TTTGGAACACCAATGGGCAT ATATGGACAGAAAGCAGCCG 20 20 45.0 50.0 58.3 58.0 3.6 0.0 0.313896 75561 75988 519-519 1.000000 78.1 rpoA_p1 rpoA 1 AGGATTCAAAAGCCATTTTCTTCT CATAATGGATGTAGGCCTCCT 24 21 33.3 47.6 57.3 56.6 0.0 9.7 7.044706 81458 82477 1190-1195 1.000000 40.3 rpoA_p2 rpoA 2 AGGATTCAAAAGCCATTTTCTTCT TGGATGTAGGCCTCCTAAAA 24 20 33.3 45.0 57.3 55.5 0.0 9.7 7.170945 81458 82477 1185-1190 1.000000 40.3 rpoA_p3 rpoA 3 AGGATTCAAAAGCCATTTTCTTCT TGGATGTAGGCCTCCTAAAAA 24 21 33.3 42.9 57.3 56.3 0.0 9.7 7.355602 81458 82477 1185-1190 1.000000 40.3 rpoA_p4 rpoA 4 AGGATTCAAAAGCCATTTTCTTC CATAATGGATGTAGGCCTCCT 23 21 34.8 47.6 56.0 56.6 0.0 9.7 7.405644 81458 82477 1190-1195 1.000000 40.3 rpoA_p5 rpoA 5 GGATTCAAAAGCCATTTTCTTCT CATAATGGATGTAGGCCTCCT 23 21 34.8 47.6 56.0 56.6 0.0 9.7 7.405644 81458 82477 1189-1194 1.000000 40.3 ycf2_p1 ycf2 1 TGAGTCACAGGTATCTGGCA TCCGTTGTGGAAGAATCGAC 20 20 50.0 50.0 58.1 57.9 8.1 0.0 0.137356 93448 93567 638-638 1.000000 80.3 ycf2_p2 ycf2 2 TGAGTCACAGGTATCTGGCA TGATTTGACCCCATAAGCGG 20 20 50.0 50.0 58.1 57.9 8.1 0.0 0.114143 93448 93567 1081-1081 1.000000 80.0 ycf2_p3 ycf2 3 TGAGTCACAGGTATCTGGCA CCACCACCCAATAGCATGTT 20 20 50.0 50.0 58.1 58.1 8.1 0.0 0.211505 93448 93567 1059-1059 1.000000 79.2 ycf2_p4 ycf2 4 AGACATTTCTGGAACGCCTG TGATTTGACCCCATAAGCGG 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.237821 93448 93567 952-952 0.333333 51.4 ycf2_p5 ycf2 5 CAGACATTTCTGGAACGCCT TGATTTGACCCCATAAGCGG 20 20 50.0 50.0 58.2 57.9 0.6 0.0 0.237821 93448 93567 953-953 0.333333 51.4 ndhF-rpl32_p1 ndhF-rpl32 1 GCGAAAGGTATGATCCATGC GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 57.0 57.7 0.0 0.0 1.282656 115898 117121 1288-1307 1.000000 71.0 ndhF-rpl32_p2 ndhF-rpl32 2 GCGAAAGGTATGATCCATGC GGCCTGATATCCCCTTCCTT 20 20 50.0 55.0 57.0 58.5 0.0 0.0 1.527045 115898 117121 1346-1365 1.000000 69.0 ndhF-rpl32_p3 ndhF-rpl32 3 GCGAAAGGTATGATCCATGC TACGTTTCTTTGGAACCGCC 20 20 50.0 50.0 57.0 58.8 0.0 0.0 1.748872 115898 117121 1287-1306 1.000000 67.3 ndhF-rpl32_p4 ndhF-rpl32 4 AGCGAAAGGTATGATCCATGC GTACGTTTCTTTGGAACCGC 21 20 47.6 50.0 58.5 57.7 0.0 0.0 1.807085 115898 117121 1289-1308 1.000000 66.8 ndhF-rpl32_p5 ndhF-rpl32 5 AGCGAAAGGTATGATCCATGC GGCCTGATATCCCCTTCCTT 21 20 47.6 55.0 58.5 58.5 0.0 0.0 2.051473 115898 117121 1347-1366 1.000000 64.8 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CGCGGCAAAAGCTTTATCTT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 57.7 57.9 13.1 0.0 0.386849 117296 118669 1507-1517 1.000000 77.8 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 CGCGGCAAAAGCTTTATCTT AGCAGCGTGTCTACCAATTT 20 20 45.0 45.0 57.7 57.8 13.1 0.0 0.447576 117296 118669 1500-1510 1.000000 77.3 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 CGCGGCAAAAGCTTTATCTT CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 57.7 57.8 13.1 0.0 0.458867 117296 118669 1506-1516 1.000000 77.2 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 CGCGGCAAAAGCTTTATCTT CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 57.7 57.8 13.1 0.0 0.458867 117296 118669 1505-1515 1.000000 77.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 CGCGGCAAAAGCTTTATCTT GAGCAGCGTGTCTACCAATT 20 20 45.0 50.0 57.7 58.3 13.1 0.0 0.535719 117296 118669 1501-1511 1.000000 76.6 ndhA_p1 ndhA 1 CCTTGCAGCTCGTATTGTCT TTTGGAACGAGTTGAAGGGG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.040076 124185 126399 2940-2942 1.000000 80.2 ndhA_p2 ndhA 2 CCTTGCAGCTCGTATTGTCT GGTTTATCGGGACCAATGCT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.068518 124185 126399 2885-2887 1.000000 80.0 ndhA_p3 ndhA 3 AACCCAGTCACCATAGGGAA TTTGGAACGAGTTGAAGGGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.078087 124185 126399 2903-2905 1.000000 79.9 ndhA_p4 ndhA 4 AACCCAGTCACCATAGGGAA GGTTTATCGGGACCAATGCT 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.106529 124185 126399 2848-2850 1.000000 79.7 ndhA_p5 ndhA 5 CCTTGCAGCTCGTATTGTCT GGAAAATTCGTCCACCTGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.110098 124185 126399 2482-2484 1.000000 79.6 rps15-ycf1_p1 rps15-ycf1 1 TGAAATTCAACAGACCCTTTGT AATGGCAGCCGTTTCAGTAT 22 20 36.4 45.0 56.4 57.9 0.0 13.7 3.755555 127957 128276 448-450 1.000000 51.6 rps15-ycf1_p2 rps15-ycf1 2 TGAAATTCAACAGACCCTTTGT ATAATGGCAGCCGTTTCAGT 22 20 36.4 45.0 56.4 57.9 0.0 24.3 3.755555 127957 128276 450-452 1.000000 51.6 rps15-ycf1_p3 rps15-ycf1 3 ACTTGAAATTCAACAGACCCT AATGGCAGCCGTTTCAGTAT 21 20 38.1 45.0 55.3 57.9 4.0 13.7 3.813526 127957 128276 451-453 1.000000 51.1 rps15-ycf1_p4 rps15-ycf1 4 ACTTGAAATTCAACAGACCCT ATAATGGCAGCCGTTTCAGT 21 20 38.1 45.0 55.3 57.9 4.0 24.3 3.813526 127957 128276 453-455 1.000000 51.1 rps15-ycf1_p5 rps15-ycf1 5 TGAAATTCAACAGACCCTTTGT CCAATAATGGCAGCCGTTTC 22 20 36.4 50.0 56.4 57.8 0.0 24.3 3.835110 127957 128276 453-455 1.000000 50.9 ycf1_p1 ycf1 1 AGTCGAAATAAAGTGCATTTT TTCATACGCAAATGGCACTA 21 20 28.6 40.0 52.3 55.5 12.2 0.0 9.218089 130347 130466 195-195 1.000000 42.5 ycf1_p2 ycf1 2 AGTCGAAATAAAGTGCATTTT TCATACGCAAATGGCACTAT 21 20 28.6 40.0 52.3 55.2 12.2 0.0 9.452213 130347 130466 194-194 1.000000 42.5 ycf1_p3 ycf1 3 AGTCGAAATAAAGTGCATTTT TCATACGCAAATGGCACTATT 21 21 28.6 38.1 52.3 56.0 12.2 0.0 9.646911 130347 130466 194-194 1.000000 42.5 ycf1_p4 ycf1 4 AGTCGAAATAAAGTGCATTTT ATTCATACGCAAATGGCACT 21 20 28.6 40.0 52.3 56.1 12.2 0.0 8.581273 130347 130466 196-196 1.000000 42.4 ycf1_p5 ycf1 5 TAGTCGAAATAAAGTGCATTTT ATTCATACGCAAATGGCACT 22 20 27.3 40.0 52.4 56.1 12.2 0.0 9.481857 130347 130466 197-197 1.000000 42.4