primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CAACCGTGCTAACCTTGGTA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.301771 43 363 442-445 1.000000 79.9 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG ATCAACCGTGCTAACCTTGG 20 20 55.0 50.0 58.1 58.2 0.0 0.0 0.307703 43 363 444-447 1.000000 79.9 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.306133 43 363 456-459 1.000000 79.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.307640 43 363 455-458 1.000000 79.8 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAATCCACTGCCTTGATCC CAACCGTGCTAACCTTGGTA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.307640 43 363 457-460 1.000000 79.8 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AGTCGCACTTAAAAGCCGAG CAACCCACAGAGACGGTTTA 20 20 50.0 50.0 58.6 57.5 6.4 0.0 1.107298 4167 5168 1125-1134 1.000000 73.6 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TAGTCGCACTTAAAAGCCGA CAACCCACAGAGACGGTTTA 20 20 45.0 50.0 57.3 57.5 3.0 0.0 1.265451 4167 5168 1126-1135 1.000000 72.3 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCGCACTTAAAAGCCGAGTA CAACCCACAGAGACGGTTTA 20 20 45.0 50.0 57.3 57.5 3.0 0.0 1.265451 4167 5168 1123-1132 1.000000 72.3 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CGCACTTAAAAGCCGAGTAC CAACCCACAGAGACGGTTTA 20 20 50.0 50.0 57.2 57.5 0.0 0.0 1.318959 4167 5168 1122-1131 1.000000 71.9 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGTCGCACTTAAAAGCCGAG ACCCACAGAGACGGTTTATG 20 20 50.0 50.0 58.6 57.2 6.4 0.0 1.333073 4167 5168 1123-1132 1.000000 71.7 rps16_p1 rps16 1 AGTTGTCCTAATCCACCTTT TGTACCGATCGAGCTAATGAC 20 21 40.0 47.6 53.8 57.4 0.0 18.7 5.801016 5169 6521 1444-1473 1.000000 42.7 rps16_p2 rps16 2 AGTTGTCCTAATCCACCTTTT TGTACCGATCGAGCTAATGAC 21 21 38.1 47.6 54.7 57.4 0.0 18.7 5.906688 5169 6521 1444-1473 1.000000 42.7 rps16_p3 rps16 3 AGTTGTCCTAATCCACCTTT GTACCGATCGAGCTAATGACT 20 21 40.0 47.6 53.8 57.1 0.0 18.7 6.080475 5169 6521 1443-1472 1.000000 42.7 rps16_p4 rps16 4 AGTTGTCCTAATCCACCTTTTT TGTACCGATCGAGCTAATGAC 22 21 36.4 47.6 55.5 57.4 0.0 18.7 6.094728 5169 6521 1444-1473 1.000000 42.7 rps16_p5 rps16 5 AGTTGTCCTAATCCACCTTTT GTACCGATCGAGCTAATGACT 21 21 38.1 47.6 54.7 57.1 0.0 18.7 6.186147 5169 6521 1443-1472 1.000000 42.7 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 GCCAAGAGCATTTTCGTTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.093489 6522 8111 1729-1786 1.000000 81.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6522 8111 1663-1720 1.000000 80.4 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TGATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 6522 8111 1674-1731 1.000000 79.9 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GCCAAGAGCATTTTCGTTCC TAAATCGAAATGGGGCGTGG 20 20 50.0 50.0 58.0 58.6 0.0 0.0 0.632863 6522 8111 1787-1844 1.000000 76.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GCCAAGAGCATTTTCGTTCC TTCGGAGGTTCGAATCCTTC 20 20 50.0 50.0 58.0 57.3 0.0 16.9 0.684861 6522 8111 1733-1790 1.000000 76.6 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 TCAAAACCGGTTGCCTTACC GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 58.7 57.8 23.1 15.8 0.841812 8184 8873 797-809 1.000000 78.1 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 AAAACCGGTTGCCTTACCAC GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 59.0 57.8 23.1 15.8 1.127963 8184 8873 795-807 1.000000 75.9 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 CGAACCTCCGAATAACAGGA GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 57.0 57.8 0.0 15.8 1.115785 8184 8873 817-829 1.000000 75.8 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 TCGAACCTCCGAATAACAGG GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 57.0 57.8 0.0 15.8 1.115785 8184 8873 818-830 1.000000 75.8 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 CAAAACCGGTTGCCTTACCA GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 59.0 57.8 23.1 15.8 1.128745 8184 8873 796-808 1.000000 75.8 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 57.9 58.0 1.4 0.0 0.060677 9060 9536 790-828 1.000000 85.1 psbK-psbI_p2 psbK-psbI 2 GTTTGGCAAGCTGCTGTAAG GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 57.9 58.0 1.4 0.0 0.062065 9060 9536 791-829 1.000000 85.1 psbK-psbI_p3 psbK-psbI 3 GTTTGGCAAGCTGCTGTAAG CCGGGGGAATCAAAAAGGAA 20 20 50.0 50.0 57.9 58.1 1.4 0.0 0.124459 9060 9536 972-1016 1.000000 84.5 psbK-psbI_p4 psbK-psbI 4 GTTTGGCAAGCTGCTGTAAG ATTGGGAGAGATGGCTGAGT 20 20 50.0 50.0 57.9 58.1 1.4 0.0 0.165542 9060 9536 809-847 1.000000 84.2 psbK-psbI_p5 psbK-psbI 5 TTTTCTTCGCCAAATTGCCC TGGACTAAAGCGTCGGATTG 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.166902 9060 9536 885-923 1.000000 84.1 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 ATGATCCCGGACGTAATCCT TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 58.0 58.0 0.7 0.0 0.015705 9648 9784 243-245 1.000000 83.5 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 ATGATCCCGGACGTAATCCT GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 58.0 58.0 0.7 0.0 0.017093 9648 9784 244-246 1.000000 83.5 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 ATGATCCCGGACGTAATCCT GGGTTCGAATCCCTCTCTCT 20 20 50.0 55.0 58.0 58.2 0.7 17.2 0.228051 9648 9784 193-195 1.000000 82.7 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 ATGATCCCGGACGTAATCCT ATTGGGAGAGATGGCTGAGT 20 20 50.0 50.0 58.0 58.1 0.7 0.0 0.120570 9648 9784 262-264 1.000000 82.4 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 ATGATCCCGGACGTAATCCT TTCGAATCCCTCTCTCTCCG 20 20 50.0 55.0 58.0 58.3 0.7 0.0 0.329584 9648 9784 190-192 1.000000 82.0 petN-psbM_p1 petN-psbM 1 TTTCCCTTTCGCTCGTAGTG CGTAAAAACAGTCAGTCAAAAGGA 20 24 50.0 37.5 57.9 57.9 0.0 0.0 4.188768 31242 32296 1124-1136 1.000000 47.8 petN-psbM_p2 petN-psbM 2 TTTCCCTTTCGCTCGTAGTG ACGTAAAAACAGTCAGTCAAAAGG 20 24 50.0 37.5 57.9 58.1 0.0 0.0 4.198616 31242 32296 1125-1137 1.000000 47.8 petN-psbM_p3 petN-psbM 3 ACATTTTCCCTTTCGCTCGT CGTAAAAACAGTCAGTCAAAAGGA 20 24 45.0 37.5 58.1 57.9 0.0 0.0 4.222012 31242 32296 1128-1140 1.000000 47.6 petN-psbM_p4 petN-psbM 4 ACATTTTCCCTTTCGCTCGT ACGTAAAAACAGTCAGTCAAAAGG 20 24 45.0 37.5 58.1 58.1 0.0 0.0 4.231860 31242 32296 1129-1141 1.000000 47.5 petN-psbM_p5 petN-psbM 5 TAGTAAGTCTCGCTTGGGCT CGTAAAAACAGTCAGTCAAAAGGA 20 24 50.0 37.5 58.2 57.9 0.0 0.0 4.265570 31242 32296 1166-1178 1.000000 47.2 psaA-ycf3_p1 psaA-ycf3 1 GTTTTTGAGAAATGCCCCGG CAGAGGCTTGGTTCGATCAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.177990 45148 45845 910-915 1.000000 80.1 psaA-ycf3_p2 psaA-ycf3 2 CCCATTCCTCGAAAGACGTT CAGAGGCTTGGTTCGATCAA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.193903 45148 45845 885-890 1.000000 80.0 psaA-ycf3_p3 psaA-ycf3 3 GTTTTTGAGAAATGCCCCGG ATAGCGCTTACTCCGGGTAA 20 20 50.0 50.0 57.9 58.3 0.0 18.7 0.382785 45148 45845 866-871 1.000000 78.5 psaA-ycf3_p4 psaA-ycf3 4 GTTTTTGAGAAATGCCCCGG TAGCGCTTACTCCGGGTAAT 20 20 50.0 50.0 57.9 58.3 0.0 18.7 0.382785 45148 45845 865-870 1.000000 78.5 psaA-ycf3_p5 psaA-ycf3 5 TTTTTGAGAAATGCCCCGGT CAGAGGCTTGGTTCGATCAA 20 20 45.0 50.0 58.3 57.9 0.0 0.0 0.388325 45148 45845 909-914 1.000000 78.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 49631 50351 771-790 1.000000 81.8 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 49631 50351 779-798 1.000000 81.2 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 49631 50351 803-822 1.000000 80.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 49631 50351 811-830 1.000000 80.2 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 49631 50351 794-813 1.000000 79.9 petA-psbJ_p1 petA-psbJ 1 CCCATTACGTGTCCAAGGTC TTCCGGATTAGGCTCATCCC 20 20 55.0 55.0 58.3 58.9 0.0 19.5 1.209178 67243 68252 1153-1159 1.000000 71.9 petA-psbJ_p2 petA-psbJ 2 GACCCATTACGTGTCCAAGG TTCCGGATTAGGCTCATCCC 20 20 55.0 55.0 58.3 58.9 0.0 19.5 1.209178 67243 68252 1155-1161 1.000000 71.9 petA-psbJ_p3 petA-psbJ 3 CCCATTACGTGTCCAAGGTC CGGATTAGGCTCATCCCTGT 20 20 55.0 55.0 58.3 58.9 0.0 19.5 1.214025 67243 68252 1150-1156 1.000000 71.9 petA-psbJ_p4 petA-psbJ 4 GACCCATTACGTGTCCAAGG CGGATTAGGCTCATCCCTGT 20 20 55.0 55.0 58.3 58.9 0.0 19.5 1.214025 67243 68252 1152-1158 1.000000 71.9 petA-psbJ_p5 petA-psbJ 5 ACGTGTCCAAGGTCTTTTGT TTCCGGATTAGGCTCATCCC 20 20 45.0 55.0 57.6 58.9 0.0 19.5 1.356650 67243 68252 1147-1153 1.000000 70.7 petG-trnW-CCA_p1 petG-trnW-CCA 1 ACAGACGTGGTGATCAGTTG CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 57.8 57.9 0.0 1.4 0.243803 70604 70710 175-175 1.000000 79.9 petG-trnW-CCA_p2 petG-trnW-CCA 2 ACAGACGTGGTGATCAGTTG TTCAAATCCTACAGGGCGTG 20 20 50.0 50.0 57.8 57.9 0.0 5.5 0.262804 70604 70710 156-156 1.000000 79.9 petG-trnW-CCA_p3 petG-trnW-CCA 3 ACAGACGTGGTGATCAGTTG GTTCAAATCCTACAGGGCGT 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.264278 70604 70710 157-157 1.000000 79.9 petG-trnW-CCA_p4 petG-trnW-CCA 4 GACGTGGTGATCAGTTGGAT CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 57.6 57.9 0.0 1.4 0.475610 70604 70710 172-172 1.000000 78.1 petG-trnW-CCA_p5 petG-trnW-CCA 5 GACGTGGTGATCAGTTGGAT TTCAAATCCTACAGGGCGTG 20 20 50.0 50.0 57.6 57.9 0.0 5.5 0.494611 70604 70710 153-153 1.000000 78.1 ndhF-rpl32_p1 ndhF-rpl32 1 CATTCCCACCAGTTCCCAAA CCCGTGGAAATTGATTTGGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.016994 116653 117790 1723-1728 1.000000 82.6 ndhF-rpl32_p2 ndhF-rpl32 2 AATACGAGCACATTCCCACC CCCGTGGAAATTGATTTGGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.047139 116653 117790 1733-1738 1.000000 82.3 ndhF-rpl32_p3 ndhF-rpl32 3 CGGTCGTGTGAACCAAAAAC CCCGTGGAAATTGATTTGGC 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.191143 116653 117790 1762-1767 1.000000 81.1 ndhF-rpl32_p4 ndhF-rpl32 4 GGTCGTGTGAACCAAAAACC CCCGTGGAAATTGATTTGGC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.206544 116653 117790 1761-1766 1.000000 81.0 ndhF-rpl32_p5 ndhF-rpl32 5 TTGTGCGGATTTTGCGATTG CCCGTGGAAATTGATTTGGC 20 20 45.0 50.0 58.3 58.0 0.0 0.0 0.312939 116653 117790 1984-1989 1.000000 80.0 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GCCAAATCAATTTCCACGGG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.133029 117953 118649 747-796 1.000000 85.3 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GCCAAATCAATTTCCACGGG ACGTTTCGGTTGAAAGACCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.035755 117953 118649 1265-1321 1.000000 85.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GCCAAATCAATTTCCACGGG CCTAAGAGCAGCGTGTCTAC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.205047 117953 118649 746-795 1.000000 84.8 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GCCAAATCAATTTCCACGGG CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.205047 117953 118649 745-794 1.000000 84.8 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GCCAAATCAATTTCCACGGG AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.193756 117953 118649 789-789 0.333333 51.8 ccsA_p1 ccsA 1 ATTTCAAACAAGCCGCCATG TGGACCACGCGAACTTTTTA 20 20 45.0 45.0 57.9 58.0 0.0 15.9 0.132338 118838 119803 1520-1534 1.000000 80.7 ccsA_p2 ccsA 2 TAGACACGCTGCTCTTAGGA TGGACCACGCGAACTTTTTA 20 20 50.0 45.0 57.9 58.0 0.0 15.9 0.173449 118838 119803 1490-1504 1.000000 80.4 ccsA_p3 ccsA 3 AAATTGGTAGACACGCTGCT TGGACCACGCGAACTTTTTA 20 20 45.0 45.0 57.8 58.0 0.0 15.9 0.234176 118838 119803 1497-1511 1.000000 79.9 ccsA_p4 ccsA 4 GGTAGACACGCTGCTCTTAG TGGACCACGCGAACTTTTTA 20 20 55.0 45.0 57.8 58.0 0.0 15.9 0.245467 118838 119803 1492-1506 1.000000 79.8 ccsA_p5 ccsA 5 GTAGACACGCTGCTCTTAGG TGGACCACGCGAACTTTTTA 20 20 55.0 45.0 57.8 58.0 0.0 15.9 0.245467 118838 119803 1491-1505 1.000000 79.8 ccsA-ndhD_p1 ccsA-ndhD 1 CGGCAATTGTAGCTTCTATGG TGGTTCTCTCGCTATCAGTTG 21 21 47.6 47.6 57.1 57.5 7.4 0.0 3.395871 119804 120036 404-411 1.000000 56.2 ccsA-ndhD_p2 ccsA-ndhD 2 CGGCAATTGTAGCTTCTATGG GGTTCTCTCGCTATCAGTTGA 21 21 47.6 47.6 57.1 57.2 7.4 0.0 3.670185 119804 120036 403-410 1.000000 54.0 ccsA-ndhD_p3 ccsA-ndhD 3 GGCAATTGTAGCTTCTATGGGA TGGTTCTCTCGCTATCAGTTG 22 21 45.5 47.6 58.2 57.5 7.4 0.0 3.689831 119804 120036 403-410 1.000000 53.8 ccsA-ndhD_p4 ccsA-ndhD 4 GGCAATTGTAGCTTCTATGGG TGGTTCTCTCGCTATCAGTTG 21 21 47.6 47.6 56.7 57.5 7.4 0.0 3.782301 119804 120036 403-410 1.000000 53.1 ccsA-ndhD_p5 ccsA-ndhD 5 TGAATTCGGCAATTGTAGCT TGGTTCTCTCGCTATCAGTTG 20 21 40.0 47.6 55.7 57.5 7.4 0.0 3.782453 119804 120036 410-417 1.000000 53.0 ycf1_p1 ycf1 1 TCAATTTTGGTGGACGAGGT ACAATTTTGTTGCCAGTAAACCA 20 23 45.0 34.8 57.4 57.9 0.0 0.0 3.740793 132734 132853 216-216 1.000000 53.0 ycf1_p2 ycf1 2 GTCAATTTTGGTGGACGAGG ACAATTTTGTTGCCAGTAAACCA 20 23 50.0 34.8 57.0 57.9 0.0 0.0 4.080684 132734 132853 217-217 1.000000 50.3 ycf1_p3 ycf1 3 CCTTGTCAATTTTGGTGGACG ACAATTTTGTTGCCAGTAAACCA 21 23 47.6 34.8 58.0 57.9 0.0 0.0 4.103211 132734 132853 221-221 1.000000 50.1 ycf1_p4 ycf1 4 TGGTGGACGAGGTACTTTTT ACAATTTTGTTGCCAGTAAACCA 20 23 45.0 34.8 56.7 57.9 0.0 0.0 4.398082 132734 132853 209-209 1.000000 47.9 ycf1_p5 ycf1 5 TCAATTTTGGTGGACGAGGT CAATTTTGTTGCCAGTAAACCA 20 22 45.0 36.4 57.4 56.3 0.0 0.0 4.397994 132734 132853 215-215 1.000000 47.8