feature_id	feature_type	parent_gene	label_name	start	end	strand	length_bp	region	pi	variable_sites	indel_sites	conserved_left_bp	conserved_right_bp	primer_available	species_resolution	unique_haplotype_count	species_specific_haplotype_ratio	interspecific_divergence	alignment_reliability	markerseek_score
trnH	tRNA	trnH	trnH	4	76	1	73	LSC	0.000000	0	0	0	19	no	0.000000	1	0.000000	0.000000	1.000000	18.800000
IGS_001	igs	trnH|psbA	trnH-psbA	77	357	0	281	LSC	0.100877	48	26	73	26	yes	1.000000	4	1.000000	0.095558	0.943060	78.400000
psbA	gene	psbA	psbA	358	1419	-1	1062	LSC	0.008788	18	0	56	30	no	1.000000	4	1.000000	0.008788	1.000000	52.100000
IGS_002	igs	psbA|trnK	psbA-trnK	1420	1702	0	283	LSC	0.018382	9	12	49	63	no	1.000000	4	1.000000	0.018421	0.961131	57.300000
trnK_part2	tRNA	trnK	trnK	1703	1738	-1	36	LSC	0.000000	0	0	3	27	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
matK	gene	matK	matK	2037	3542	-1	1506	LSC	0.023904	65	0	16	14	no	1.000000	4	1.000000	0.023904	1.000000	60.900000
IGS_005	igs	matK|trnK	matK-trnK	3543	4279	0	737	LSC	0.024197	32	7	5	38	no	1.000000	4	1.000000	0.023227	0.993216	61.400000
trnK_part1	tRNA	trnK	trnK	4280	4316	-1	37	LSC	0.000000	0	0	13	1	no	0.000000	1	0.000000	0.000000	1.000000	18.800000
IGS_006	igs	trnK|trnQ	trnK-trnQ	4317	6506	0	2190	LSC	0.035337	142	67	50	75	yes	1.000000	4	1.000000	0.034966	0.982192	73.300000
trnQ	tRNA	trnQ	trnQ	6507	6578	-1	72	LSC	0.000000	0	0	32	3	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
IGS_007	igs	trnQ|psbK	trnQ-psbK	6579	6908	0	330	LSC	0.020263	13	2	104	20	no	1.000000	4	1.000000	0.020297	0.996970	54.300000
psbK	gene	psbK	psbK	6909	7094	1	186	LSC	0.023297	8	0	7	48	no	1.000000	4	1.000000	0.023297	1.000000	53.900000
IGS_008	igs	psbK|psbI	psbK-psbI	7095	7535	0	441	LSC	0.026376	20	155	10	95	no	1.000000	4	1.000000	0.027157	0.988662	61.900000
psbI	gene	psbI	psbI	7536	7646	1	111	LSC	0.010511	2	0	2	2	no	0.500000	3	0.666667	0.010511	1.000000	35.300000
IGS_009	igs	psbI|trnS	psbI-trnS	7647	7736	0	90	LSC	0.057407	10	2	6	99	yes	1.000000	4	1.000000	0.058374	0.988889	75.300000
trnS	tRNA	trnS	trnS	7737	7825	-1	89	LSC	0.000000	0	0	38	10	no	0.000000	1	0.000000	0.000000	1.000000	19.500000
IGS_010	igs	trnS|trnT	trnS-trnT	7826	8451	0	626	LSC	0.045600	53	21	127	26	yes	1.000000	4	1.000000	0.045991	0.987220	80.500000
trnT_part1	tRNA	trnT	trnT	8452	8485	1	34	LSC	0.014706	1	0	16	2	no	0.250000	2	0.500000	0.014706	1.000000	33.900000
trnT_part2	tRNA	trnT	trnT	9210	9252	1	43	LSC	0.000000	0	0	107	6	no	0.000000	1	0.000000	0.000000	1.000000	19.200000
IGS_013	igs	trnT|trnR	trnT-trnR	9253	9402	0	150	LSC	0.032222	9	1	150	76	no	1.000000	4	1.000000	0.032394	0.993333	65.800000
trnR	tRNA	trnR	trnR	9403	9474	1	72	LSC	0.000000	0	0	17	4	no	0.000000	1	0.000000	0.000000	1.000000	19.100000
IGS_014	igs	trnR|atpA	trnR-atpA	9475	9582	0	108	LSC	0.032407	7	0	89	20	no	1.000000	4	1.000000	0.032407	1.000000	61.700000
atpA	gene	atpA	atpA	9583	11106	-1	1524	LSC	0.006234	18	0	0	24	no	1.000000	4	1.000000	0.006234	1.000000	48.000000
IGS_015	igs	atpA|atpF	atpA-atpF	11107	11172	0	66	LSC	0.015385	2	2	110	18	no	1.000000	4	1.000000	0.015465	0.984848	52.700000
atpF	gene	atpF	atpF	11173	12456	-1	1284	LSC	0.014798	36	3	6	32	no	1.000000	4	1.000000	0.014560	0.999221	54.600000
IGS_016	igs	atpF|atpH	atpF-atpH	12457	12922	0	466	LSC	0.026466	23	0	44	72	no	1.000000	4	1.000000	0.026466	1.000000	62.300000
atpH	gene	atpH	atpH	12923	13168	-1	246	LSC	0.008808	4	0	19	62	no	0.500000	3	0.666667	0.008808	1.000000	35.500000
IGS_017	igs	atpH|atpI	atpH-atpI	13169	13669	0	501	LSC	0.027944	26	14	12	9	no	1.000000	4	1.000000	0.028510	0.996008	64.600000
atpI	gene	atpI	atpI	13670	14419	-1	750	LSC	0.011111	15	0	2	20	no	1.000000	4	1.000000	0.011111	1.000000	51.400000
IGS_018	igs	atpI|rps2	atpI-rps2	14420	14661	0	242	LSC	0.028926	12	5	47	90	no	1.000000	4	1.000000	0.027183	0.995868	62.600000
rps2	gene	rps2	rps2	14662	15372	-1	711	LSC	0.005626	8	0	16	18	no	1.000000	4	1.000000	0.005626	1.000000	48.900000
IGS_019	igs	rps2|rpoC2	rps2-rpoC2	15373	15587	0	215	LSC	0.017054	7	0	25	16	no	0.500000	3	0.666667	0.017054	1.000000	41.100000
rpoC2	gene	rpoC2	rpoC2	15588	19727	-1	4140	LSC	0.015056	118	0	33	30	no	1.000000	4	1.000000	0.015056	1.000000	51.400000
IGS_020	igs	rpoC2|rpoC1	rpoC2-rpoC1	19728	19910	0	183	LSC	0.023679	8	9	4	97	no	1.000000	4	1.000000	0.022304	0.994536	59.600000
rpoC1	gene	rpoC1	rpoC1	19911	22741	-1	2831	LSC	0.011951	65	3	31	80	no	1.000000	4	1.000000	0.011841	1.000000	51.700000
IGS_021	igs	rpoC1|rpoB	rpoC1-rpoB	22742	22767	0	26	LSC	0.000000	0	0	26	54	no	0.000000	1	0.000000	0.000000	1.000000	20.700000
rpoB	gene	rpoB	rpoB	22768	25986	-1	3219	LSC	0.009527	59	0	52	37	no	1.000000	4	1.000000	0.009527	1.000000	49.600000
IGS_022	igs	rpoB|trnC	rpoB-trnC	25987	27099	0	1113	LSC	0.026117	54	25	10	71	no	1.000000	4	1.000000	0.025024	0.982031	64.500000
trnC	tRNA	trnC	trnC	27100	27171	1	72	LSC	0.006944	1	0	4	12	no	0.250000	2	0.500000	0.006944	1.000000	28.600000
IGS_023	igs	trnC|ycf6	trnC-ycf6	27172	27822	0	651	LSC	0.021505	26	10	0	68	no	1.000000	4	1.000000	0.021149	1.000000	60.200000
ycf6	gene	ycf6	ycf6	27823	27912	1	90	LSC	0.005556	1	0	92	31	no	0.250000	2	0.500000	0.005556	1.000000	29.700000
IGS_024	igs	ycf6|psbM	ycf6-psbM	27913	28433	0	521	LSC	0.026861	25	9	21	24	no	1.000000	4	1.000000	0.026309	0.986564	63.400000
psbM	gene	psbM	psbM	28434	28538	-1	105	LSC	0.004762	1	0	8	63	no	0.250000	2	0.500000	0.004762	1.000000	27.400000
IGS_025	igs	psbM|trnD	psbM-trnD	28539	29566	0	1028	LSC	0.030642	57	70	80	7	no	1.000000	4	1.000000	0.029246	0.999027	70.700000
trnD	tRNA	trnD	trnD	29567	29643	-1	77	LSC	0.006494	1	0	20	7	no	0.250000	2	0.500000	0.006494	1.000000	28.500000
IGS_026	igs	trnD|trnY	trnD-trnY	29644	30059	0	416	LSC	0.031651	24	32	69	110	yes	1.000000	4	1.000000	0.030616	1.000000	72.200000
trnY	tRNA	trnY	trnY	30060	30145	-1	86	LSC	0.000000	0	0	8	24	no	0.000000	1	0.000000	0.000000	1.000000	19.400000
IGS_027	igs	trnY|trnE	trnY-trnE	30146	30202	0	57	LSC	0.035088	4	0	94	125	no	1.000000	4	1.000000	0.035088	1.000000	69.100000
IGS_028	igs	trnE|trnT	trnE-trnT	30278	30939	0	662	LSC	0.041793	48	64	81	96	yes	1.000000	4	1.000000	0.040194	0.995468	83.100000
IGS_029	igs	trnT|psbD	trnT-psbD	31014	32280	0	1267	LSC	0.022938	54	40	74	68	no	1.000000	4	1.000000	0.023309	0.985004	67.800000
psbD	gene	psbD	psbD	32281	33342	1	1062	LSC	0.005179	11	0	18	75	no	1.000000	4	1.000000	0.005179	1.000000	48.700000
psbC	gene	psbC	psbC	33290	34711	1	1422	LSC	0.003751	10	0	175	149	no	1.000000	4	1.000000	0.003751	1.000000	57.500000
IGS_031	igs	psbC|trnS	psbC-trnS	34712	34885	0	174	LSC	0.002874	1	0	90	105	no	0.250000	2	0.500000	0.002874	1.000000	32.200000
trnS	tRNA	trnS	trnS	34886	34978	-1	93	LSC	0.000000	0	0	24	12	no	0.000000	1	0.000000	0.000000	1.000000	19.700000
IGS_032	igs	trnS|ycf9	trnS-ycf9	34979	35326	0	348	LSC	0.027938	19	20	117	59	no	1.000000	4	1.000000	0.028794	0.994253	68.000000
ycf9	gene	ycf9	ycf9	35327	35515	1	189	LSC	0.005291	2	0	0	70	no	0.250000	2	0.500000	0.005291	1.000000	27.100000
IGS_033	igs	ycf9|trnG	ycf9-trnG	35516	36020	0	505	LSC	0.044245	39	71	117	74	yes	1.000000	4	1.000000	0.042759	0.986139	81.700000
trnG	tRNA	trnG	trnG	36021	36092	1	72	LSC	0.000000	0	0	60	2	no	0.000000	1	0.000000	0.000000	1.000000	18.900000
IGS_034	igs	trnG|trnM	trnG-trnM	36093	36233	0	141	LSC	0.024823	7	15	132	95	no	1.000000	4	1.000000	0.026089	1.000000	67.400000
trnM	tRNA	trnM	trnM	36234	36308	-1	75	LSC	0.000000	0	0	12	20	no	0.000000	1	0.000000	0.000000	1.000000	19.700000
IGS_035	igs	trnM|rps14	trnM-rps14	36309	36468	0	160	LSC	0.009375	3	1	87	206	no	1.000000	4	1.000000	0.009395	1.000000	51.300000
rps14	gene	rps14	rps14	36469	36771	-1	303	LSC	0.003850	2	0	5	48	no	0.500000	3	0.666667	0.003850	1.000000	31.100000
IGS_036	igs	rps14|psaB	rps14-psaB	36772	36904	0	133	LSC	0.008772	2	0	39	6	no	0.500000	3	0.666667	0.008772	1.000000	34.400000
psaB	gene	psaB	psaB	36905	39109	-1	2205	LSC	0.004233	17	0	68	120	no	1.000000	4	1.000000	0.004233	1.000000	50.200000
IGS_037	igs	psaB|psaA	psaB-psaA	39110	39134	0	25	LSC	0.000000	0	0	89	95	no	0.000000	1	0.000000	0.000000	1.000000	25.400000
psaA	gene	psaA	psaA	39135	41387	-1	2253	LSC	0.004365	19	0	114	111	no	1.000000	4	1.000000	0.004365	1.000000	53.500000
IGS_038	igs	psaA|ycf3	psaA-ycf3	41388	42110	0	723	LSC	0.017981	24	6	300	87	no	1.000000	4	1.000000	0.017597	1.000000	63.500000
ycf3	gene	ycf3	ycf3	42111	43282	-1	1172	LSC	0.008397	19	2	39	119	no	1.000000	4	1.000000	0.008404	0.998294	52.600000
IGS_039	igs	ycf3|trnS	ycf3-trnS	43283	44378	0	1096	LSC	0.013646	27	16	4	120	no	1.000000	4	1.000000	0.013083	0.991788	54.700000
trnS	tRNA	trnS	trnS	44379	44465	1	87	LSC	0.000000	0	0	15	33	no	0.000000	1	0.000000	0.000000	1.000000	19.900000
IGS_040	igs	trnS|rps4	trnS-rps4	44466	44777	0	312	LSC	0.032051	19	5	102	89	no	1.000000	4	1.000000	0.031253	0.996795	68.300000
rps4	gene	rps4	rps4	44778	45383	-1	606	LSC	0.004950	6	0	20	65	no	1.000000	4	1.000000	0.004950	1.000000	48.700000
IGS_041	igs	rps4|trnT	rps4-trnT	45384	45766	0	383	LSC	0.020122	14	3	40	5	no	1.000000	4	1.000000	0.020152	0.994778	54.000000
IGS_042	igs	trnT|trnL	trnT-trnL	45842	46655	0	814	LSC	0.028636	43	60	42	62	no	1.000000	4	1.000000	0.029252	0.993857	71.900000
trnL_part1	tRNA	trnL	trnL	46656	46690	1	35	LSC	0.000000	0	0	2	27	no	0.000000	1	0.000000	0.000000	1.000000	18.900000
trnL_part2	tRNA	trnL	trnL	47011	47060	1	50	LSC	0.000000	0	0	64	3	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
IGS_045	igs	trnL|trnF	trnL-trnF	47061	47404	0	344	LSC	0.025678	17	7	114	59	no	1.000000	4	1.000000	0.026036	0.997093	62.900000
trnF	tRNA	trnF	trnF	47405	47477	1	73	LSC	0.006849	1	0	56	1	no	0.250000	2	0.500000	0.006849	1.000000	28.300000
IGS_046	igs	trnF|ndhJ	trnF-ndhJ	47478	48035	0	558	LSC	0.024237	26	3	13	141	no	1.000000	4	1.000000	0.024285	0.998208	61.200000
ndhJ	gene	ndhJ	ndhJ	48036	48512	-1	477	LSC	0.010133	9	0	1	35	no	1.000000	4	1.000000	0.010133	1.000000	48.200000
IGS_047	igs	ndhJ|psbG	ndhJ-psbG	48513	48614	0	102	LSC	0.019608	4	1	31	32	no	1.000000	4	1.000000	0.019673	1.000000	54.700000
psbG	gene	psbG	psbG	48615	49292	-1	678	LSC	0.010816	14	0	9	22	no	1.000000	4	1.000000	0.010816	1.000000	51.900000
IGS_048	igs	psbG|ndhC	psbG-ndhC	49293	49356	0	64	LSC	0.078125	8	5	8	41	yes	1.000000	4	1.000000	0.064266	1.000000	78.700000
ndhC	gene	ndhC	ndhC	49357	49719	-1	363	LSC	0.011478	8	0	3	6	no	0.500000	3	0.666667	0.011478	1.000000	37.600000
IGS_049	igs	ndhC|trnV	ndhC-trnV	49720	50444	0	725	LSC	0.024666	33	12	33	14	no	1.000000	4	1.000000	0.024835	0.997241	63.500000
trnV_part2	tRNA	trnV	trnV	50445	50479	-1	35	LSC	0.014286	1	0	9	8	no	0.250000	2	0.500000	0.014286	1.000000	34.000000
trnV_part1	tRNA	trnV	trnV	51089	51127	-1	39	LSC	0.000000	0	0	6	87	no	0.000000	1	0.000000	0.000000	1.000000	19.200000
IGS_052	igs	trnV|trnM	trnV-trnM	51128	51311	0	184	LSC	0.009058	3	0	45	76	no	1.000000	4	1.000000	0.009058	1.000000	47.000000
trnM	tRNA	trnM	trnM	51312	51384	1	73	LSC	0.000000	0	0	30	3	no	0.000000	1	0.000000	0.000000	1.000000	19.000000
IGS_053	igs	trnM|atpE	trnM-atpE	51385	51531	0	147	LSC	0.050926	13	7	103	48	yes	1.000000	4	1.000000	0.045927	0.972789	79.500000
atpE	gene	atpE	atpE	51532	51930	-1	399	LSC	0.005013	4	0	4	5	no	1.000000	4	1.000000	0.005013	1.000000	43.400000
atpB	gene	atpB	atpB	51927	53423	-1	1497	LSC	0.005567	15	0	25	12	no	1.000000	4	1.000000	0.005567	1.000000	48.400000
IGS_055	igs	atpB|rbcL	atpB-rbcL	53424	54237	0	814	LSC	0.017227	26	34	38	300	no	1.000000	4	1.000000	0.017125	0.979115	62.700000
rbcL	gene	rbcL	rbcL	54238	55677	1	1440	LSC	0.005671	16	0	45	25	no	1.000000	4	1.000000	0.005671	1.000000	49.600000
IGS_056	igs	rbcL|accD	rbcL-accD	55678	56371	0	694	LSC	0.024256	31	16	26	8	no	1.000000	4	1.000000	0.022623	0.994236	63.400000
accD	gene	accD	accD	56372	57832	1	1461	LSC	0.011111	30	12	9	2	no	1.000000	4	1.000000	0.010907	0.995893	52.300000
IGS_057	igs	accD|psaI	accD-psaI	57833	58430	0	598	LSC	0.017280	20	0	35	44	no	1.000000	4	1.000000	0.017280	1.000000	58.300000
psaI	gene	psaI	psaI	58431	58544	1	114	LSC	0.004386	1	0	54	4	no	0.250000	2	0.500000	0.004386	1.000000	26.800000
IGS_058	igs	psaI|ycf4	psaI-ycf4	58545	58909	0	365	LSC	0.026027	18	7	69	50	no	1.000000	4	1.000000	0.025397	1.000000	62.700000
ycf4	gene	ycf4	ycf4	58910	59464	1	555	LSC	0.009309	10	0	29	22	no	1.000000	4	1.000000	0.009309	1.000000	50.900000
IGS_059	igs	ycf4|ycf10	ycf4-ycf10	59465	59919	0	455	LSC	0.027900	21	22	57	20	no	1.000000	4	1.000000	0.025272	0.989011	66.000000
ycf10	gene	ycf10	ycf10	59920	60609	1	690	LSC	0.012560	15	0	22	22	no	1.000000	4	1.000000	0.012560	1.000000	53.800000
IGS_060	igs	ycf10|petA	ycf10-petA	60610	60833	0	224	LSC	0.011161	5	1	75	37	no	1.000000	4	1.000000	0.011184	1.000000	48.600000
petA	gene	petA	petA	60834	61796	1	963	LSC	0.009519	18	0	68	20	no	1.000000	4	1.000000	0.009519	1.000000	51.900000
IGS_061	igs	petA|psbJ	petA-psbJ	61797	62750	0	954	LSC	0.030573	54	19	223	73	no	1.000000	4	1.000000	0.029744	0.989518	72.200000
psbJ	gene	psbJ	psbJ	62751	62873	-1	123	LSC	0.004065	1	0	14	2	no	0.250000	2	0.500000	0.004065	1.000000	26.400000
IGS_062	igs	psbJ|psbL	psbJ-psbL	62874	63018	0	145	LSC	0.021839	6	0	49	18	no	1.000000	4	1.000000	0.021839	1.000000	53.900000
psbL	gene	psbL	psbL	63019	63135	-1	117	LSC	0.014245	3	0	6	11	no	0.500000	3	0.666667	0.014245	1.000000	38.200000
IGS_063	igs	psbL|psbF	psbL-psbF	63136	63156	0	21	LSC	0.055556	2	0	32	194	no	0.500000	3	0.666667	0.055556	1.000000	64.900000
psbF	gene	psbF	psbF	63157	63276	-1	120	LSC	0.000000	0	0	8	74	no	0.000000	1	0.000000	0.000000	1.000000	19.400000
IGS_064	igs	psbF|psbE	psbF-psbE	63277	63285	0	9	LSC	0.000000	0	0	128	65	no	0.000000	1	0.000000	NA	1.000000	23.600000
psbE	gene	psbE	psbE	63286	63537	-1	252	LSC	0.004630	2	0	137	19	no	0.500000	3	0.666667	0.004630	1.000000	32.600000
IGS_065	igs	psbE|ORF31	psbE-ORF31	63538	64912	0	1375	LSC	0.044858	107	457	134	14	yes	1.000000	4	1.000000	0.045463	0.981091	78.000000
ORF31	gene	ORF31	ORF31	64913	65008	1	96	LSC	0.005208	1	0	2	14	no	0.250000	2	0.500000	0.005208	1.000000	27.200000
IGS_066	igs	ORF31|petG	ORF31-petG	65009	65205	0	197	LSC	0.037225	13	12	81	107	yes	1.000000	4	1.000000	0.034836	0.949239	73.300000
petG	gene	petG	petG	65206	65319	1	114	LSC	0.004386	1	0	2	22	no	0.250000	2	0.500000	0.004386	1.000000	26.700000
IGS_067	igs	petG|trnW	petG-trnW	65320	65448	0	129	LSC	0.023256	5	0	6	81	no	1.000000	4	1.000000	0.023256	1.000000	53.300000
trnW	tRNA	trnW	trnW	65449	65522	-1	74	LSC	0.000000	0	0	4	7	no	0.000000	1	0.000000	0.000000	1.000000	19.100000
IGS_068	igs	trnW|trnP	trnW-trnP	65523	65709	0	187	LSC	0.034946	12	12	78	115	yes	1.000000	4	1.000000	0.033158	0.994652	72.700000
trnP	tRNA	trnP	trnP	65710	65784	-1	75	LSC	0.000000	0	0	8	40	no	0.000000	1	0.000000	0.000000	1.000000	19.400000
IGS_069	igs	trnP|psaJ	trnP-psaJ	65785	66118	0	334	LSC	0.033433	20	1	83	127	yes	1.000000	4	1.000000	0.032486	0.997006	67.300000
psaJ	gene	psaJ	psaJ	66119	66253	1	135	LSC	0.003704	1	0	80	19	no	0.250000	2	0.500000	0.003704	1.000000	27.500000
IGS_070	igs	psaJ|rpl33	psaJ-rpl33	66254	66676	0	423	LSC	0.055687	45	11	7	8	yes	1.000000	4	1.000000	0.054040	0.997636	78.600000
rpl33	gene	rpl33	rpl33	66677	66877	1	201	LSC	0.014096	5	0	9	2	no	1.000000	4	1.000000	0.014096	1.000000	47.100000
IGS_071	igs	rpl33|rps18	rpl33-rps18	66878	67099	0	222	LSC	0.038580	16	6	60	65	no	1.000000	4	1.000000	0.038580	0.972973	70.800000
rps18	gene	rps18	rps18	67100	67405	1	306	LSC	0.011983	7	0	4	17	no	0.500000	3	0.666667	0.011983	1.000000	36.800000
IGS_072	igs	rps18|rpl20	rps18-rpl20	67406	67686	0	281	LSC	0.022539	12	0	1	2	no	1.000000	4	1.000000	0.022539	1.000000	53.100000
rpl20	gene	rpl20	rpl20	67687	68040	-1	354	LSC	0.020716	13	0	11	32	no	1.000000	4	1.000000	0.020716	1.000000	53.400000
IGS_073	igs	rpl20|rps12	rpl20-rps12	68041	68800	0	760	LSC	0.017763	25	2	35	180	no	1.000000	4	1.000000	0.017791	1.000000	58.800000
rps12_part1	gene	rps12	rps12	68801	68914	-1	114	LSC	0.000000	0	0	46	66	no	0.000000	1	0.000000	0.000000	1.000000	22.200000
IGS_074	igs	rps12|clpP	rps12-clpP	68915	69099	0	185	LSC	0.032432	12	0	160	149	no	0.500000	3	0.666667	0.032432	1.000000	62.000000
clpP	gene	clpP	clpP	69100	71169	-1	2070	LSC	0.017641	68	5	16	35	no	1.000000	4	1.000000	0.017662	0.999034	56.100000
IGS_075	igs	clpP|psbB	clpP-psbB	71170	71649	0	480	LSC	0.013542	11	2	45	152	no	1.000000	4	1.000000	0.013571	1.000000	54.100000
psbB	gene	psbB	psbB	71650	73176	1	1527	LSC	0.006549	19	0	73	10	no	1.000000	4	1.000000	0.006549	1.000000	48.900000
IGS_076	igs	psbB|psbT	psbB-psbT	73177	73363	0	187	LSC	0.027938	9	14	33	35	no	1.000000	4	1.000000	0.027938	0.925134	62.100000
psbT	gene	psbT	psbT	73364	73465	1	102	LSC	0.009804	2	0	84	30	no	0.500000	3	0.666667	0.009804	1.000000	37.200000
IGS_077	igs	psbT|psbN	psbT-psbN	73466	73530	0	65	LSC	0.041026	5	0	63	18	no	1.000000	4	1.000000	0.041026	1.000000	66.900000
psbN	gene	psbN	psbN	73531	73662	-1	132	LSC	0.007576	2	0	4	4	no	0.250000	2	0.500000	0.007576	1.000000	29.000000
IGS_078	igs	psbN|psbH	psbN-psbH	73663	73766	0	104	LSC	0.024038	5	0	99	15	no	1.000000	4	1.000000	0.024038	1.000000	55.500000
psbH	gene	psbH	psbH	73767	73988	1	222	LSC	0.012763	5	0	17	34	no	1.000000	4	1.000000	0.012763	1.000000	47.300000
IGS_079	igs	psbH|petB	psbH-petB	73989	74123	0	135	LSC	0.014815	4	0	8	23	no	1.000000	4	1.000000	0.014815	1.000000	48.500000
petB	gene	petB	petB	74124	75559	1	1436	LSC	0.013347	37	1	21	13	no	1.000000	4	1.000000	0.013356	0.999304	54.000000
IGS_080	igs	petB|petD	petB-petD	75560	75756	0	197	LSC	0.010998	4	1	63	72	no	1.000000	4	1.000000	0.011029	1.000000	50.300000
petD	gene	petD	petD	75757	76967	1	1211	LSC	0.019300	43	21	55	8	no	1.000000	4	1.000000	0.018136	0.990917	59.300000
IGS_081	igs	petD|rpoA	petD-rpoA	76968	77172	0	205	LSC	0.050407	20	2	67	47	yes	1.000000	4	1.000000	0.049085	1.000000	76.900000
rpoA	gene	rpoA	rpoA	77173	78156	-1	984	LSC	0.011687	22	0	3	65	no	1.000000	4	1.000000	0.011687	1.000000	52.000000
IGS_082	igs	rpoA|rps11	rpoA-rps11	78157	78230	0	74	LSC	0.013514	2	0	35	135	no	0.250000	2	0.500000	0.013514	1.000000	35.500000
rps11	gene	rps11	rps11	78231	78647	-1	417	LSC	0.005995	5	0	2	17	no	0.500000	3	0.666667	0.005995	1.000000	34.900000
IGS_083	igs	rps11|rpl36	rps11-rpl36	78648	78760	0	113	LSC	0.013274	3	0	21	25	no	0.500000	3	0.666667	0.013274	1.000000	39.000000
rpl36	gene	rpl36	rpl36	78761	78874	-1	114	LSC	0.013158	3	0	25	51	no	0.250000	2	0.500000	0.013158	1.000000	34.500000
IGS_084	igs	rpl36|rps8	rpl36-rps8	78875	79335	0	461	LSC	0.030905	26	26	66	34	no	1.000000	4	1.000000	0.030829	0.982646	69.700000
rps8	gene	rps8	rps8	79336	79746	-1	411	LSC	0.016461	13	6	12	19	no	1.000000	4	1.000000	0.016461	0.985401	53.400000
IGS_085	igs	rps8|rpl14	rps8-rpl14	79747	79969	0	223	LSC	0.034535	12	6	44	80	no	1.000000	4	1.000000	0.023654	0.973094	65.600000
rpl14	gene	rpl14	rpl14	79970	80338	-1	369	LSC	0.006775	5	0	2	37	no	1.000000	4	1.000000	0.006775	1.000000	43.800000
IGS_086	igs	rpl14|rpl16	rpl14-rpl16	80339	80461	0	123	LSC	0.021680	5	1	89	92	no	1.000000	4	1.000000	0.021747	1.000000	60.000000
rpl16	gene	rpl16	rpl16	80462	81945	-1	1484	LSC	0.020791	57	14	6	16	no	1.000000	4	1.000000	0.020455	0.995957	59.400000
IGS_087	igs	rpl16|rps3	rpl16-rps3	81946	82119	0	174	LSC	0.027778	9	2	33	66	no	1.000000	4	1.000000	0.027989	1.000000	60.300000
rps3	gene	rps3	rps3	82120	82776	-1	657	LSC	0.016743	20	0	13	31	no	1.000000	4	1.000000	0.016743	1.000000	56.100000
rpl22	gene	rpl22	rpl22	82761	83243	-1	483	LSC	0.011042	10	0	100	46	no	1.000000	4	1.000000	0.011042	1.000000	52.300000
IGS_089	igs	rpl22|rps19	rpl22-rps19	83244	83298	0	55	LSC	0.009091	1	1	11	300	no	0.500000	3	0.666667	0.009259	0.981818	37.100000
rps19	gene	rps19	rps19	83299	83577	-1	279	LSC	0.000000	0	0	8	35	no	0.000000	1	0.000000	0.000000	1.000000	19.400000
IGS_090	igs	rps19|rpl2	rps19-rpl2	83578	83630	0	53	IRb	0.028302	3	0	287	120	no	0.500000	3	0.666667	0.028302	1.000000	56.900000
rpl2	gene	rpl2	rpl2	83631	85137	-1	1507	IRb	0.001438	4	0	10	288	no	1.000000	4	1.000000	0.001438	1.000000	45.500000
IGS_091	igs	rpl2|rpl23	rpl2-rpl23	85138	85155	0	18	IRb	0.000000	0	0	300	270	no	0.000000	1	0.000000	NA	1.000000	33.800000
rpl23	gene	rpl23	rpl23	85156	85437	-1	282	IRb	0.002364	1	0	300	300	no	0.000000	2	0.000000	0.002364	1.000000	35.300000
IGS_092	igs	rpl23|trnM	rpl23-trnM	85438	85604	0	167	IRb	0.000000	0	0	11	300	no	0.000000	1	0.000000	0.000000	1.000000	19.600000
trnM	tRNA	trnM	trnM	85605	85679	-1	75	IRb	0.000000	0	0	178	300	no	0.000000	1	0.000000	0.000000	1.000000	32.100000
IGS_093	igs	trnM|ycf2	trnM-ycf2	85680	85767	0	88	IRb	0.000000	0	0	253	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
ycf2	gene	ycf2	ycf2	85768	92661	1	6894	IRb	0.003360	45	6	300	15	no	1.000000	4	1.000000	0.003363	0.999130	41.000000
IGS_094	igs	ycf2|trnL	ycf2-trnL	92662	93556	0	895	IRb	0.002421	4	0	219	137	no	0.500000	3	0.666667	0.002421	1.000000	46.300000
IGS_095	igs	trnL|ndhB	trnL-ndhB	93640	94218	0	579	IRb	0.002591	3	0	300	108	no	0.500000	3	0.666667	0.002591	1.000000	43.900000
ndhB	gene	ndhB	ndhB	94219	96067	-1	1849	IRb	0.001082	4	0	203	300	no	0.500000	3	0.666667	0.001082	1.000000	49.400000
IGS_096	igs	ndhB|rps7	ndhB-rps7	96068	96742	0	675	IRb	0.005432	7	0	300	300	no	0.500000	3	0.666667	0.005432	1.000000	53.100000
rps7	gene	rps7	rps7	96743	97210	-1	468	IRb	0.000000	0	0	14	214	no	0.000000	1	0.000000	0.000000	1.000000	23.300000
IGS_097	igs	rps7|trnV	rps7-trnV	97211	99941	0	2731	IRb	0.004092	21	11	300	300	no	1.000000	4	1.000000	0.004101	0.998169	59.400000
IGS_098	igs	trnV|rrn16S	trnV-rrn16S	100014	100244	0	231	IRb	0.000000	0	0	263	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
rrn16S	rRNA	rrn16S	rrn16S	100245	101735	1	1491	IRb	0.000000	0	0	300	125	no	0.000000	1	0.000000	0.000000	1.000000	34.400000
IGS_099	igs	rrn16S|trnE	rrn16S-trnE	101736	101958	0	223	IRb	0.004484	2	0	300	300	no	0.500000	3	0.666667	0.004484	1.000000	46.300000
trnE_part1	tRNA	trnE	trnE	101959	101990	1	32	IRb	0.000000	0	0	27	300	no	0.000000	1	0.000000	0.000000	1.000000	20.800000
orf133	gene	orf133	orf133	102340	102675	1	336	IRb	0.003472	2	0	300	103	no	0.500000	3	0.666667	0.003472	1.000000	38.900000
IGS_102	igs	orf133|trnE	orf133-trnE	102676	102937	0	262	IRb	0.005725	3	0	35	73	no	0.500000	3	0.666667	0.005725	1.000000	34.800000
trnE_part2	tRNA	trnE	trnE	102938	102977	1	40	IRb	0.000000	0	0	6	33	no	0.000000	1	0.000000	0.000000	1.000000	19.200000
IGS_103	igs	trnE|trnA	trnE-trnA	102978	103041	0	64	IRb	0.007812	1	0	46	291	no	0.250000	2	0.500000	0.007812	1.000000	32.400000
trnA_part1	tRNA	trnA	trnA	103042	103078	1	37	IRb	0.000000	0	0	30	254	no	0.000000	1	0.000000	0.000000	1.000000	21.000000
trnA_part2	tRNA	trnA	trnA	103879	103914	1	36	IRb	0.000000	0	0	248	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_106	igs	trnA|rrn23S	trnA-rrn23S	103915	104066	0	152	IRb	0.000000	0	0	284	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
rrn23S	rRNA	rrn23S	rrn23S	104067	106876	1	2810	IRb	0.000356	2	0	300	56	no	0.500000	3	0.666667	0.000356	1.000000	36.100000
IGS_107	igs	rrn23S|rrn4.5S	rrn23S-rrn4.5S	106877	106974	0	98	IRb	0.005102	1	0	300	300	no	0.250000	2	0.500000	0.005102	1.000000	42.000000
rrn4.5S	rRNA	rrn4.5S	rrn4.5S	106975	107077	1	103	IRb	0.000000	0	0	41	234	no	0.000000	1	0.000000	0.000000	1.000000	21.800000
IGS_108	igs	rrn4.5S|rrn5S	rrn4.5S-rrn5S	107078	107324	0	247	IRb	0.002024	1	0	144	174	no	0.250000	2	0.500000	0.002024	1.000000	35.700000
rrn5S	rRNA	rrn5S	rrn5S	107325	107445	1	121	IRb	0.000000	0	0	12	53	no	0.000000	1	0.000000	0.000000	1.000000	19.700000
IGS_109	igs	rrn5S|trnR	rrn5S-trnR	107446	107690	0	245	IRb	0.010884	5	10	133	98	no	1.000000	4	1.000000	0.011232	1.000000	57.100000
trnR	tRNA	trnR	trnR	107691	107765	1	75	IRb	0.000000	0	0	87	23	no	0.000000	1	0.000000	0.000000	1.000000	20.500000
IGS_110	igs	trnR|trnN	trnR-trnN	107766	108408	0	643	IRb	0.008035	10	1	162	300	no	1.000000	4	1.000000	0.008045	0.998445	61.600000
trnN	tRNA	trnN	trnN	108409	108482	-1	74	IRb	0.000000	0	0	226	300	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_111	igs	trnN|ycf1	trnN-ycf1	108483	108801	0	319	IRb	0.000000	0	0	300	44	no	0.000000	1	0.000000	0.000000	1.000000	22.400000
ycf1	gene	ycf1	ycf1	108802	109833	1	1032	IRb	0.003230	6	0	300	6	no	0.500000	3	0.666667	0.003230	1.000000	37.000000
ndhF	gene	ndhF	ndhF	109795	112035	-1	2241	SSC	0.019262	82	0	105	63	no	1.000000	4	1.000000	0.019262	1.000000	60.200000
IGS_113	igs	ndhF|rpl32	ndhF-rpl32	112036	112883	0	848	SSC	0.042678	64	56	35	55	yes	1.000000	4	1.000000	0.040817	0.961085	79.700000
rpl32	gene	rpl32	rpl32	112884	113042	1	159	SSC	0.018868	6	0	25	12	no	0.500000	3	0.666667	0.018868	1.000000	42.200000
IGS_114	igs	rpl32|trnL	rpl32-trnL	113043	113956	0	914	SSC	0.049052	79	164	6	86	yes	1.000000	4	1.000000	0.050908	0.969365	81.300000
IGS_115	igs	trnL|ycf5	trnL-ycf5	114039	114152	0	114	SSC	0.055556	12	9	87	72	yes	1.000000	4	1.000000	0.055066	0.991228	83.400000
ycf5	gene	ycf5	ycf5	114153	115139	1	987	SSC	0.022627	42	0	10	15	no	1.000000	4	1.000000	0.022627	1.000000	60.000000
IGS_116	igs	ycf5|ndhD	ycf5-ndhD	115140	115355	0	216	SSC	0.046296	19	1	1	43	no	1.000000	4	1.000000	0.046425	1.000000	69.900000
ndhD	gene	ndhD	ndhD	115356	116876	-1	1521	SSC	0.015889	45	0	7	47	no	1.000000	4	1.000000	0.015889	1.000000	55.100000
IGS_117	igs	ndhD|psaC	ndhD-psaC	116877	117018	0	142	SSC	0.034568	9	7	65	66	no	1.000000	4	1.000000	0.034568	0.950704	70.200000
psaC	gene	psaC	psaC	117019	117264	-1	246	SSC	0.004065	2	0	4	17	no	0.250000	2	0.500000	0.004065	1.000000	26.600000
IGS_118	igs	psaC|ndhE	psaC-ndhE	117265	117502	0	238	SSC	0.033613	15	4	167	6	no	0.500000	3	0.666667	0.032553	1.000000	53.500000
ndhE	gene	ndhE	ndhE	117503	117808	-1	306	SSC	0.007081	4	0	0	4	no	1.000000	4	1.000000	0.007081	1.000000	42.400000
IGS_119	igs	ndhE|ndhG	ndhE-ndhG	117809	118057	0	249	SSC	0.024766	11	0	113	75	no	1.000000	4	1.000000	0.024766	1.000000	59.800000
ndhG	gene	ndhG	ndhG	118058	118588	-1	531	SSC	0.021030	21	0	18	10	no	1.000000	4	1.000000	0.021030	1.000000	57.500000
IGS_120	igs	ndhG|ndhI	ndhG-ndhI	118589	118938	0	350	SSC	0.024286	16	2	24	1	no	1.000000	4	1.000000	0.023435	0.997143	55.900000
ndhI	gene	ndhI	ndhI	118939	119421	-1	483	SSC	0.010007	9	0	50	25	no	1.000000	4	1.000000	0.010007	1.000000	50.000000
IGS_121	igs	ndhI|ndhA	ndhI-ndhA	119422	119505	0	84	SSC	0.011905	2	0	20	54	no	0.250000	2	0.500000	0.011905	1.000000	33.300000
ndhA	gene	ndhA	ndhA	119506	121664	-1	2159	SSC	0.019453	78	38	44	68	no	1.000000	4	1.000000	0.019195	1.000000	61.000000
IGS_122	igs	ndhA|ndhH	ndhA-ndhH	121665	121665	0	1	SSC	0.000000	0	0	30	67	no	0.000000	1	0.000000	NA	1.000000	21.000000
ndhH	gene	ndhH	ndhH	121666	122847	-1	1182	SSC	0.016215	36	0	31	17	no	1.000000	4	1.000000	0.016215	1.000000	56.100000
IGS_123	igs	ndhH|rps15	ndhH-rps15	122848	122955	0	108	SSC	0.040123	8	6	11	6	no	1.000000	4	1.000000	0.042211	0.944444	70.000000
rps15	gene	rps15	rps15	122956	123222	-1	267	SSC	0.018102	9	0	3	5	no	1.000000	4	1.000000	0.018102	1.000000	50.100000
IGS_124	igs	rps15|ycf1	rps15-ycf1	123223	123600	0	378	SSC	0.053351	35	59	27	5	yes	1.000000	4	1.000000	0.049247	0.925926	77.100000
ycf1	gene	ycf1	ycf1	123601	128991	-1	5391	SSC	0.028290	285	24	23	300	yes	1.000000	4	1.000000	0.028307	0.996661	59.000000
IGS_125	igs	ycf1|trnN	ycf1-trnN	128992	129310	0	319	IRa	0.000000	0	0	44	300	no	0.000000	1	0.000000	0.000000	1.000000	22.400000
trnN	tRNA	trnN	trnN	129311	129384	1	74	IRa	0.000000	0	0	300	226	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_126	igs	trnN|trnR	trnN-trnR	129385	130027	0	643	IRa	0.008035	10	1	300	162	no	1.000000	4	1.000000	0.008045	0.998445	61.600000
trnR	tRNA	trnR	trnR	130028	130102	-1	75	IRa	0.000000	0	0	23	87	no	0.000000	1	0.000000	0.000000	1.000000	20.500000
IGS_127	igs	trnR|rrn5S	trnR-rrn5S	130103	130347	0	245	IRa	0.010884	5	10	98	133	no	1.000000	4	1.000000	0.011232	1.000000	57.100000
rrn5S	rRNA	rrn5S	rrn5S	130348	130468	-1	121	IRa	0.000000	0	0	53	12	no	0.000000	1	0.000000	0.000000	1.000000	19.700000
IGS_128	igs	rrn5S|rrn4.5S	rrn5S-rrn4.5S	130469	130715	0	247	IRa	0.002024	1	0	174	144	no	0.250000	2	0.500000	0.002024	1.000000	35.700000
rrn4.5S	rRNA	rrn4.5S	rrn4.5S	130716	130818	-1	103	IRa	0.000000	0	0	234	41	no	0.000000	1	0.000000	0.000000	1.000000	21.800000
IGS_129	igs	rrn4.5S|rrn23S	rrn4.5S-rrn23S	130819	130916	0	98	IRa	0.005102	1	0	300	300	no	0.250000	2	0.500000	0.005102	1.000000	42.000000
rrn23S	rRNA	rrn23S	rrn23S	130917	133726	-1	2810	IRa	0.000356	2	0	56	300	no	0.500000	3	0.666667	0.000356	1.000000	36.100000
IGS_130	igs	rrn23S|trnA	rrn23S-trnA	133727	133878	0	152	IRa	0.000000	0	0	300	284	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
trnA_part2	tRNA	trnA	trnA	133879	133914	-1	36	IRa	0.000000	0	0	300	248	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
trnA_part1	tRNA	trnA	trnA	134715	134751	-1	37	IRa	0.000000	0	0	254	30	no	0.000000	1	0.000000	0.000000	1.000000	21.000000
IGS_133	igs	trnA|trnE	trnA-trnE	134752	134815	0	64	IRa	0.007812	1	0	291	46	no	0.250000	2	0.500000	0.007812	1.000000	32.400000
trnE_part2	tRNA	trnE	trnE	134816	134855	-1	40	IRa	0.000000	0	0	33	6	no	0.000000	1	0.000000	0.000000	1.000000	19.200000
orf133	gene	orf133	orf133	135118	135453	-1	336	IRa	0.003472	2	0	103	300	no	0.500000	3	0.666667	0.003472	1.000000	38.900000
IGS_136	igs	orf133|trnE	orf133-trnE	135454	135802	0	349	IRa	0.000000	0	0	249	59	no	0.000000	1	0.000000	0.000000	1.000000	24.200000
trnE_part1	tRNA	trnE	trnE	135803	135834	-1	32	IRa	0.000000	0	0	300	27	no	0.000000	1	0.000000	0.000000	1.000000	20.800000
IGS_137	igs	trnE|rrn16S	trnE-rrn16S	135835	136057	0	223	IRa	0.004484	2	0	300	300	no	0.500000	3	0.666667	0.004484	1.000000	46.300000
rrn16S	rRNA	rrn16S	rrn16S	136058	137548	-1	1491	IRa	0.000000	0	0	125	300	no	0.000000	1	0.000000	0.000000	1.000000	34.400000
IGS_138	igs	rrn16S|trnV	rrn16S-trnV	137549	137779	0	231	IRa	0.000000	0	0	300	263	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
IGS_139	igs	trnV|rps12	trnV-rps12	137852	139734	0	1883	IRa	0.005139	18	11	300	300	no	1.000000	4	1.000000	0.005155	0.997345	62.100000
rps12_part2	gene	rps12	rps12	139735	140529	1	795	IRa	0.001887	3	0	235	300	no	0.500000	3	0.666667	0.001887	1.000000	50.700000
IGS_140	igs	rps12|rps7	rps12-rps7	140530	140582	0	53	IRa	0.000000	0	0	161	300	no	0.000000	1	0.000000	0.000000	1.000000	30.800000
rps7	gene	rps7	rps7	140583	141050	1	468	IRa	0.000000	0	0	214	14	no	0.000000	1	0.000000	0.000000	1.000000	23.300000
IGS_141	igs	rps7|ndhB	rps7-ndhB	141051	141725	0	675	IRa	0.005185	7	0	300	300	no	0.250000	2	0.500000	0.005185	1.000000	48.300000
ndhB	gene	ndhB	ndhB	141726	143574	1	1849	IRa	0.001082	4	0	300	203	no	0.500000	3	0.666667	0.001082	1.000000	49.400000
IGS_142	igs	ndhB|trnL	ndhB-trnL	143575	144153	0	579	IRa	0.002591	3	0	108	300	no	0.500000	3	0.666667	0.002591	1.000000	43.900000
IGS_143	igs	trnL|ycf2	trnL-ycf2	144237	145131	0	895	IRa	0.002421	4	0	137	219	no	0.500000	3	0.666667	0.002421	1.000000	46.300000
ycf2	gene	ycf2	ycf2	145132	152025	-1	6894	IRa	0.003360	45	6	15	300	no	1.000000	4	1.000000	0.003363	0.999130	41.000000
IGS_144	igs	ycf2|trnM	ycf2-trnM	152026	152113	0	88	IRa	0.000000	0	0	300	253	no	0.000000	1	0.000000	0.000000	1.000000	33.800000
trnM	tRNA	trnM	trnM	152114	152188	1	75	IRa	0.000000	0	0	300	178	no	0.000000	1	0.000000	0.000000	1.000000	32.100000
IGS_145	igs	trnM|rpl23	trnM-rpl23	152189	152355	0	167	IRa	0.000000	0	0	300	11	no	0.000000	1	0.000000	0.000000	1.000000	19.600000
rpl23	gene	rpl23	rpl23	152356	152637	1	282	IRa	0.002364	1	0	300	300	no	0.000000	2	0.000000	0.002364	1.000000	35.300000
IGS_146	igs	rpl23|rpl2	rpl23-rpl2	152638	152655	0	18	IRa	0.000000	0	0	270	300	no	0.000000	1	0.000000	NA	1.000000	33.800000
rpl2	gene	rpl2	rpl2	152656	154162	1	1507	IRa	0.001438	4	0	288	10	no	1.000000	4	1.000000	0.001438	1.000000	45.500000
IGS_147	igs	rpl2|trnH	rpl2-trnH	154163	3	0	169	IRa	0.011834	4	0	120	92	no	0.500000	3	0.666667	0.011834	1.000000	43.300000