Hotspot

trnT-UGU-trnL-UAA

LSC · 45375-46352 · 978 bp

Back to Rhomboda

Pi 0.00784
MarkerSeek score 61.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 TCAATCATGGAAAGAGCCGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 1029-1085 bp 1.0 84.2
trnT-UGU-trnL-UAA_p2 TCAATCATGGAAAGAGCCGG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.0 58.1 1037-1093 bp 1.0 83.6
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 972-1028 bp 1.0 83.5
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 980-1036 bp 1.0 82.9
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1004-1060 bp 1.0 82.6