feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 546 1607 -1 1062 LSC 0.005821 31 0 6 41 no 0.500000 15 0.733333 0.005821 1.000000 41.100000 IGS_001 igs psbA|trnK-UUU psbA-trnK-UUU 1608 1822 0 215 LSC 0.011658 13 0 284 46 no 0.227273 10 0.500000 0.011658 1.000000 39.300000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1823 1860 -1 38 LSC 0.002392 1 0 4 8 no 0.045455 2 0.500000 0.002392 1.000000 24.300000 matK gene matK matK 2133 3653 -1 1521 LSC 0.010645 79 0 13 4 no 0.681818 18 0.833333 0.010645 1.000000 49.300000 IGS_004 igs matK|trnK-UUU matK-trnK-UUU 3654 4362 0 709 LSC 0.011961 44 1 16 102 no 0.681818 18 0.833333 0.011975 0.998590 52.300000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4363 4399 -1 37 LSC 0.000000 0 0 143 65 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 IGS_005 igs trnK-UUU|ycf3 trnK-UUU-ycf3 4400 6897 0 2498 LSC 0.026719 330 785 180 31 yes 1.000000 22 1.000000 0.025885 0.987590 73.400000 ycf3 gene ycf3 ycf3 6898 8783 -1 1886 LSC 0.007210 56 20 17 79 no 0.727273 18 0.888889 0.007236 0.997349 47.300000 IGS_006 igs ycf3|trnS-GGA ycf3-trnS-GGA 8784 9117 0 334 LSC 0.014777 23 11 110 113 no 0.681818 17 0.882353 0.014717 0.991018 59.500000 trnS-GGA tRNA trnS-GGA trnS-GGA 9118 9204 1 87 LSC 0.000000 0 0 25 26 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_007 igs trnS-GGA|rps4 trnS-GGA-rps4 9205 9492 0 288 LSC 0.014114 17 190 112 4 no 0.500000 14 0.785714 0.013604 1.000000 47.500000 rps4 gene rps4 rps4 9493 10119 -1 627 LSC 0.010978 20 0 6 14 no 0.454545 14 0.714286 0.010978 1.000000 42.900000 IGS_008 igs rps4|trnT-UGU rps4-trnT-UGU 10120 10487 0 368 LSC 0.024829 41 9 121 81 no 0.818182 20 0.900000 0.024805 0.994565 68.100000 trnT-UGU tRNA trnT-UGU trnT-UGU 10488 10560 -1 73 LSC 0.008717 7 0 71 8 no 0.045455 2 0.500000 0.008717 1.000000 36.100000 IGS_009 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 10561 11396 0 836 LSC 0.016896 68 26 144 133 yes 0.818182 20 0.900000 0.016872 0.994019 71.700000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 11397 11435 1 39 LSC 0.000000 0 0 66 94 no 0.000000 1 0.000000 0.000000 1.000000 23.700000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 11940 11991 1 52 LSC 0.000000 0 0 100 22 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_012 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 11992 12367 0 376 LSC 0.018168 25 1 152 96 no 0.545455 16 0.750000 0.018171 1.000000 54.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 12368 12442 1 75 LSC 0.000000 0 0 67 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_013 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 12443 12965 0 523 LSC 0.009287 27 5 142 111 no 0.500000 14 0.785714 0.009297 1.000000 52.900000 ndhJ gene ndhJ ndhJ 12966 13442 -1 477 LSC 0.006552 13 0 33 99 no 0.272727 12 0.500000 0.006552 1.000000 36.400000 IGS_014 igs ndhJ|ndhK ndhJ-ndhK 13443 13545 0 103 LSC 0.004161 3 0 10 134 no 0.090909 4 0.500000 0.004161 1.000000 26.700000 ndhK gene ndhK ndhK 13546 14223 -1 678 LSC 0.003544 11 0 3 23 no 0.272727 11 0.545455 0.003544 1.000000 34.000000 IGS_015 igs ndhK|ndhC ndhK-ndhC 14224 14277 0 54 LSC 0.006814 1 6 47 105 no 0.227273 8 0.625000 0.007056 1.000000 37.800000 ndhC gene ndhC ndhC 14278 14640 -1 363 LSC 0.003399 7 0 30 75 no 0.136364 6 0.500000 0.003399 1.000000 28.800000 IGS_016 igs ndhC|trnV-UAC ndhC-trnV-UAC 14641 15108 0 468 LSC 0.019743 37 36 257 118 no 0.545455 15 0.800000 0.017723 0.989316 65.800000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 15109 15147 -1 39 LSC 0.000000 0 0 16 79 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 15732 15770 -1 39 LSC 0.000000 0 0 267 61 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 IGS_019 igs trnV-UAC|rbcL trnV-UAC-rbcL 15771 15984 0 214 LSC 0.007768 10 0 300 47 no 0.409091 11 0.818182 0.007768 1.000000 39.300000 rbcL gene rbcL rbcL 15985 17412 -1 1428 LSC 0.006851 37 0 103 146 no 0.681818 17 0.882353 0.006851 1.000000 51.800000 IGS_020 igs rbcL|atpB rbcL-atpB 17413 18196 0 784 LSC 0.013816 47 16 56 68 no 0.727273 19 0.842105 0.013499 1.000000 59.100000 atpB gene atpB atpB 18197 19693 1 1497 LSC 0.004020 25 0 5 205 no 0.409091 12 0.750000 0.004020 1.000000 36.900000 atpE gene atpE atpE 19690 20091 1 402 LSC 0.003715 6 0 11 32 no 0.090909 5 0.400000 0.003715 1.000000 26.900000 IGS_022 igs atpE|trnM-CAU atpE-trnM-CAU 20092 20315 0 224 LSC 0.016195 14 4 24 29 no 0.500000 15 0.733333 0.016375 0.991071 46.900000 trnM-CAU tRNA trnM-CAU trnM-CAU 20316 20387 -1 72 LSC 0.009740 3 0 72 39 no 0.090909 4 0.500000 0.009740 1.000000 33.000000 IGS_023 igs trnM-CAU|trnI-CAU trnM-CAU-trnI-CAU 20388 20628 0 241 LSC 0.074048 81 80 42 20 yes 0.636364 17 0.823529 0.084911 1.000000 72.500000 trnI-CAU tRNA trnI-CAU trnI-CAU 20629 20705 -1 77 LSC 0.047847 29 23 75 128 no 0.227273 6 0.833333 0.046773 0.961039 66.900000 IGS_024 igs trnI-CAU|rpoB trnI-CAU-rpoB 20706 22107 0 1402 LSC 0.085420 518 974 56 26 yes 1.000000 22 1.000000 0.092950 0.982882 84.500000 rpoB gene rpoB rpoB 22108 25302 1 3195 LSC 0.008036 110 0 3 18 no 0.909091 21 0.952381 0.008036 1.000000 46.800000 IGS_025 igs rpoB|rpoC1 rpoB-rpoC1 25303 26008 0 706 LSC 0.010307 27 264 1 74 no 0.545455 15 0.800000 0.010560 1.000000 50.000000 rpoC1 gene rpoC1 rpoC1 26009 28066 1 2058 LSC 0.008370 77 0 14 6 no 0.772727 19 0.894737 0.008370 1.000000 47.200000 IGS_026 igs rpoC1|rpoC2 rpoC1-rpoC2 28067 28236 0 170 LSC 0.025898 33 10 19 4 no 0.363636 11 0.727273 0.026647 1.000000 56.200000 rpoC2 gene rpoC2 rpoC2 28237 32349 1 4113 LSC 0.009092 166 0 15 21 no 0.818182 20 0.900000 0.009092 1.000000 45.700000 IGS_027 igs rpoC2|rps2 rpoC2-rps2 32350 32631 0 282 LSC 0.012511 15 5 59 11 no 0.454545 13 0.769231 0.012706 0.985816 42.000000 rps2 gene rps2 rps2 32632 33339 1 708 LSC 0.003381 11 0 90 64 no 0.272727 11 0.545455 0.003381 1.000000 38.400000 IGS_028 igs rps2|atpI rps2-atpI 33340 33546 0 207 LSC 0.009620 9 0 47 59 no 0.181818 9 0.444444 0.009620 1.000000 35.400000 atpI gene atpI atpI 33547 34290 1 744 LSC 0.003910 15 0 55 45 no 0.409091 13 0.692308 0.003910 1.000000 40.300000 IGS_029 igs atpI|atpH atpI-atpH 34291 35192 0 902 LSC 0.009944 47 3 9 200 no 0.681818 18 0.833333 0.009955 0.998891 49.800000 atpH gene atpH atpH 35193 35438 1 246 LSC 0.003907 4 0 168 78 no 0.045455 5 0.200000 0.003907 1.000000 29.200000 IGS_030 igs atpH|atpF atpH-atpF 35439 35816 0 378 LSC 0.008968 23 11 45 118 no 0.500000 14 0.785714 0.009039 0.994709 48.100000 atpF gene atpF atpF 35817 37083 1 1267 LSC 0.005313 30 1 138 25 no 0.454545 14 0.714286 0.005314 1.000000 40.800000 IGS_031 igs atpF|atpA atpF-atpA 37084 37149 0 66 LSC 0.033736 8 7 285 65 no 0.318182 13 0.538462 0.023161 1.000000 62.800000 atpA gene atpA atpA 37150 38673 1 1524 LSC 0.002321 16 0 24 33 no 0.363636 14 0.571429 0.002321 1.000000 35.900000 IGS_032 igs atpA|trnR-UCU atpA-trnR-UCU 38674 38791 0 118 LSC 0.022966 17 4 25 103 no 0.681818 18 0.833333 0.023457 0.991525 60.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 38792 38863 -1 72 LSC 0.000000 0 0 57 31 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_033 igs trnR-UCU|trnG-UCC trnR-UCU-trnG-UCC 38864 39107 0 244 LSC 0.007860 8 5 129 113 no 0.272727 11 0.545455 0.007887 1.000000 42.500000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 39108 39156 -1 49 LSC 0.000000 0 0 44 64 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 39841 39863 -1 23 LSC 0.000000 0 0 156 153 no 0.000000 1 0.000000 0.000000 1.000000 30.200000 IGS_036 igs trnG-UCC|trnS-GCU trnG-UCC-trnS-GCU 39864 40545 0 682 LSC 0.012371 35 0 179 110 no 0.636364 17 0.823529 0.012371 1.000000 57.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 40546 40633 1 88 LSC 0.001033 1 0 63 22 no 0.045455 2 0.500000 0.001033 1.000000 23.100000 IGS_037 igs trnS-GCU|psbI trnS-GCU-psbI 40634 40772 0 139 LSC 0.020057 8 0 151 137 no 0.181818 9 0.444444 0.020057 1.000000 48.700000 psbI gene psbI psbI 40773 40883 -1 111 LSC 0.000000 0 0 34 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_038 igs psbI|psbK psbI-psbK 40884 41274 0 391 LSC 0.014449 23 20 145 15 no 0.636364 18 0.777778 0.012302 0.979540 52.900000 psbK gene psbK psbK 41275 41460 -1 186 LSC 0.008169 5 0 177 196 no 0.181818 7 0.571429 0.008169 1.000000 42.500000 IGS_039 igs psbK|trnQ-UUG psbK-trnQ-UUG 41461 41841 0 381 LSC 0.009181 13 0 23 99 no 0.409091 13 0.692308 0.009181 1.000000 38.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 41842 41913 1 72 LSC 0.000000 0 0 9 27 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_040 igs trnQ-UUG|psaA trnQ-UUG-psaA 41914 43917 0 2004 LSC 0.012538 123 38 81 300 no 0.909091 21 0.952381 0.012104 1.000000 62.700000 psaA gene psaA psaA 43918 46170 1 2253 LSC 0.001943 23 0 96 299 no 0.409091 12 0.750000 0.001943 1.000000 40.500000 IGS_041 igs psaA|psaB psaA-psaB 46171 46195 0 25 LSC 0.000000 0 0 111 274 no 0.000000 1 0.000000 0.000000 1.000000 27.100000 psaB gene psaB psaB 46196 48400 1 2205 LSC 0.003104 29 0 136 108 no 0.681818 18 0.833333 0.003104 1.000000 47.500000 IGS_042 igs psaB|rps14 psaB-rps14 48401 48547 0 147 LSC 0.012869 11 0 24 79 no 0.227273 8 0.625000 0.012869 1.000000 40.000000 rps14 gene rps14 rps14 48548 48850 1 303 LSC 0.009415 12 0 37 0 no 0.227273 9 0.555556 0.009415 1.000000 32.300000 IGS_043 igs rps14|trnfM-CAU rps14-trnfM-CAU 48851 49006 0 156 LSC 0.016206 11 0 154 99 no 0.272727 11 0.545455 0.016206 1.000000 47.400000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 49007 49077 1 71 LSC 0.002439 1 0 29 28 no 0.000000 2 0.000000 0.002439 1.000000 23.700000 IGS_044 igs trnfM-CAU|trnG-GCC trnfM-CAU-trnG-GCC 49078 49230 0 153 LSC 0.008998 6 1 100 82 no 0.181818 7 0.571429 0.009007 1.000000 38.100000 trnG-GCC tRNA trnG-GCC trnG-GCC 49231 49301 -1 71 LSC 0.000000 0 0 17 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_045 igs trnG-GCC|psbZ trnG-GCC-psbZ 49302 49577 0 276 LSC 0.017619 19 29 88 63 no 0.909091 21 0.952381 0.017666 0.978261 62.200000 psbZ gene psbZ psbZ 49578 49766 -1 189 LSC 0.005749 5 0 10 95 no 0.136364 6 0.500000 0.005749 1.000000 28.000000 IGS_046 igs psbZ|trnS-UGA psbZ-trnS-UGA 49767 50109 0 343 LSC 0.017064 30 13 71 108 no 0.545455 15 0.800000 0.016695 1.000000 58.300000 trnS-UGA tRNA trnS-UGA trnS-UGA 50110 50202 1 93 LSC 0.000000 0 0 14 15 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_047 igs trnS-UGA|psbC trnS-UGA-psbC 50203 50435 0 233 LSC 0.010404 11 1 107 138 no 0.318182 12 0.583333 0.010412 1.000000 43.800000 psbC gene psbC psbC 50436 51857 -1 1422 LSC 0.003626 29 0 99 220 no 0.500000 15 0.733333 0.003626 1.000000 46.000000 psbD gene psbD psbD 51805 52866 -1 1062 LSC 0.001170 8 0 234 18 no 0.272727 9 0.666667 0.001170 1.000000 32.900000 IGS_049 igs psbD|trnT-GGU psbD-trnT-GGU 52867 54335 0 1469 LSC 0.012106 88 38 83 14 no 0.909091 21 0.952381 0.012163 0.989789 58.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 54336 54407 -1 72 LSC 0.009800 3 0 4 24 no 0.090909 4 0.500000 0.009800 1.000000 30.400000 IGS_050 igs trnT-GGU|rpl16 trnT-GGU-rpl16 54408 60945 0 6538 LSC 0.061066 1376 3499 57 206 yes 1.000000 22 1.000000 0.058918 0.720251 73.300000 rpl16 gene rpl16 rpl16 60946 62405 1 1460 LSC 0.005755 45 43 11 79 no 0.636364 17 0.823529 0.005653 0.997260 47.700000 IGS_051 igs rpl16|rpl14 rpl16-rpl14 62406 62524 0 119 LSC 0.004662 4 2 169 18 no 0.136364 7 0.428571 0.003104 1.000000 30.900000 rpl14 gene rpl14 rpl14 62525 62923 1 399 LSC 0.014875 18 3 39 9 no 0.227273 8 0.625000 0.014967 0.992481 38.800000 IGS_052 igs rpl14|rps8 rpl14-rps8 62924 63130 0 207 LSC 0.005730 8 12 45 20 no 0.363636 10 0.800000 0.005774 0.995169 40.500000 rps8 gene rps8 rps8 63131 63529 1 399 LSC 0.004796 11 3 197 15 no 0.363636 13 0.615385 0.004804 1.000000 35.300000 IGS_053 igs rps8|rpl36 rps8-rpl36 63530 64032 0 503 LSC 0.010827 28 2 15 12 no 0.500000 14 0.785714 0.010814 1.000000 45.600000 rpl36 gene rpl36 rpl36 64033 64146 1 114 LSC 0.013709 7 0 64 49 no 0.227273 8 0.625000 0.013709 1.000000 40.500000 IGS_054 igs rpl36|rps11 rpl36-rps11 64147 64263 0 117 LSC 0.003989 1 7 22 222 no 0.136364 5 0.600000 0.003793 0.957265 30.300000 rps11 gene rps11 rps11 64264 64680 1 417 LSC 0.002097 7 0 67 45 no 0.181818 7 0.571429 0.002097 1.000000 31.000000 IGS_055 igs rps11|rpoA rps11-rpoA 64681 64782 0 102 LSC 0.008361 2 0 194 131 no 0.000000 3 0.000000 0.008361 1.000000 34.800000 rpoA gene rpoA rpoA 64783 65607 1 825 LSC 0.008396 35 0 44 43 no 0.454545 14 0.714286 0.008396 1.000000 45.800000 IGS_056 igs rpoA|rps15 rpoA-rps15 65608 72989 0 7382 LSC 0.055226 1385 3694 22 85 yes 1.000000 22 1.000000 0.040264 0.647792 69.700000 rps15 gene rps15 rps15 72990 73382 1 393 LSC 0.022899 39 11 2 9 no 0.818182 19 0.947368 0.023122 0.987277 62.000000 IGS_057 igs rps15|psbJ rps15-psbJ 73383 74958 0 1576 LSC 0.018589 131 41 7 195 no 0.818182 20 0.900000 0.018561 0.998731 62.500000 psbJ gene psbJ psbJ 74959 75081 -1 123 LSC 0.000000 0 0 39 72 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 IGS_058 igs psbJ|psbL psbJ-psbL 75082 75211 0 130 LSC 0.004928 4 4 162 187 no 0.136364 5 0.600000 0.005037 1.000000 43.100000 psbL gene psbL psbL 75212 75328 -1 117 LSC 0.000777 1 0 57 70 no 0.045455 2 0.500000 0.000777 1.000000 25.300000 IGS_059 igs psbL|psbF psbL-psbF 75329 75350 0 22 LSC 0.000000 0 0 174 48 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 psbF gene psbF psbF 75351 75470 -1 120 LSC 0.004221 2 0 196 48 no 0.045455 3 0.333333 0.004221 1.000000 27.200000 IGS_060 igs psbF|psbE psbF-psbE 75471 75479 0 9 LSC 0.000000 0 0 71 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 psbE gene psbE psbE 75480 75731 -1 252 LSC 0.003556 5 0 80 36 no 0.045455 4 0.250000 0.003556 1.000000 26.400000 IGS_061 igs psbE|petL psbE-petL 75732 77022 0 1291 LSC 0.014677 74 10 212 300 yes 0.818182 20 0.900000 0.014726 0.997676 70.000000 petL gene petL petL 77023 77118 1 96 LSC 0.002841 3 0 11 300 no 0.090909 3 0.666667 0.002841 1.000000 26.500000 IGS_062 igs petL|petG petL-petG 77119 77295 0 177 LSC 0.006579 11 0 107 135 no 0.318182 9 0.777778 0.006579 1.000000 43.500000 petG gene petG petG 77296 77409 1 114 LSC 0.000797 1 0 284 21 no 0.045455 2 0.500000 0.000797 1.000000 22.600000 IGS_063 igs petG|trnW-CCA petG-trnW-CCA 77410 77533 0 124 LSC 0.006652 5 2 300 3 no 0.272727 8 0.750000 0.006655 0.991935 33.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 77534 77606 -1 73 LSC 0.005693 1 0 102 26 no 0.000000 2 0.000000 0.005693 1.000000 25.000000 IGS_064 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 77607 77782 0 176 LSC 0.023257 19 15 69 127 no 0.409091 14 0.642857 0.018102 0.994318 60.200000 trnP-UGG tRNA trnP-UGG trnP-UGG 77783 77856 -1 74 LSC 0.001229 1 0 56 53 no 0.045455 2 0.500000 0.001229 1.000000 25.800000 IGS_065 igs trnP-UGG|psaJ trnP-UGG-psaJ 77857 78261 0 405 LSC 0.015614 33 3 130 171 no 0.727273 18 0.888889 0.015571 1.000000 62.400000 psaJ gene psaJ psaJ 78262 78402 1 141 LSC 0.000000 0 0 6 30 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_066 igs psaJ|rpl33 psaJ-rpl33 78403 78840 0 438 LSC 0.010649 26 1 147 81 no 0.590909 17 0.764706 0.010649 0.997717 51.200000 rpl33 gene rpl33 rpl33 78841 79059 1 219 LSC 0.004487 5 6 3 76 no 0.136364 7 0.428571 0.004499 1.000000 29.800000 IGS_067 igs rpl33|rps18 rpl33-rps18 79060 79234 0 175 LSC 0.004997 4 1 137 3 no 0.045455 5 0.200000 0.005009 1.000000 25.600000 rps18 gene rps18 rps18 79235 79567 1 333 LSC 0.006006 8 6 98 33 no 0.136364 8 0.375000 0.006014 1.000000 32.400000 IGS_068 igs rps18|rpl20 rps18-rpl20 79568 79855 0 288 LSC 0.015272 24 2 294 9 no 0.363636 14 0.571429 0.015321 0.996528 44.300000 rpl20 gene rpl20 rpl20 79856 80197 -1 342 LSC 0.003949 8 0 42 19 no 0.090909 6 0.333333 0.003949 1.000000 27.500000 IGS_069 igs rpl20|rps12 rpl20-rps12 80198 80985 0 788 LSC 0.006050 24 9 170 10 no 0.590909 16 0.812500 0.006050 0.989848 44.400000 rps12_part1 gene rps12 rps12 80986 81099 -1 114 LSC 0.029240 9 0 27 82 no 0.090909 5 0.400000 0.029240 1.000000 45.500000 IGS_070 igs rps12|trnC-GCA rps12-trnC-GCA 81100 83468 0 2369 LSC 0.014713 156 1100 30 77 no 0.818182 20 0.900000 0.014781 0.999578 61.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 83469 83539 1 71 LSC 0.000000 0 0 31 6 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_071 igs trnC-GCA|petN trnC-GCA-petN 83540 84391 0 852 LSC 0.013546 54 18 102 173 no 0.636364 17 0.823529 0.013561 1.000000 61.200000 petN gene petN petN 84392 84481 1 90 LSC 0.000000 0 0 20 83 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_072 igs petN|psbM petN-psbM 84482 85630 0 1149 LSC 0.012059 68 12 110 300 no 0.727273 19 0.842105 0.012077 0.996519 60.900000 psbM gene psbM psbM 85631 85735 -1 105 LSC 0.003463 4 0 112 294 no 0.136364 4 0.750000 0.003463 1.000000 36.000000 IGS_073 igs psbM|trnD-GUC psbM-trnD-GUC 85736 86886 0 1151 LSC 0.009655 51 5 217 178 no 0.636364 18 0.777778 0.009675 0.999131 60.700000 trnD-GUC tRNA trnD-GUC trnD-GUC 86887 86960 -1 74 LSC 0.000000 0 0 64 104 no 0.000000 1 0.000000 0.000000 1.000000 23.500000 IGS_074 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 86961 87068 0 108 LSC 0.008217 5 0 138 95 no 0.181818 6 0.666667 0.008217 1.000000 38.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 87069 87152 -1 84 LSC 0.000000 0 0 3 11 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_075 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 87153 87211 0 59 LSC 0.015262 5 0 87 199 no 0.136364 6 0.500000 0.015262 1.000000 45.300000 trnE-UUC tRNA trnE-UUC trnE-UUC 87212 87284 -1 73 LSC 0.000000 0 0 47 126 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 IGS_076 igs trnE-UUC|psbB trnE-UUC-psbB 87285 89071 0 1787 LSC 0.016864 139 31 120 210 yes 1.000000 22 1.000000 0.016769 0.997202 71.500000 psbB gene psbB psbB 89072 90598 1 1527 LSC 0.002345 16 0 118 44 no 0.363636 13 0.615385 0.002345 1.000000 37.400000 IGS_077 igs psbB|psbT psbB-psbT 90599 90776 0 178 LSC 0.010198 9 7 210 300 no 0.136364 8 0.375000 0.010338 0.971910 51.300000 psbT gene psbT psbT 90777 90884 1 108 LSC 0.000000 0 0 48 218 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_078 igs psbT|psbN psbT-psbN 90885 90944 0 60 LSC 0.006061 4 0 156 158 no 0.136364 4 0.750000 0.006061 1.000000 44.100000 psbN gene psbN psbN 90945 91076 -1 132 LSC 0.000689 1 0 216 26 no 0.045455 2 0.500000 0.000689 1.000000 22.800000 IGS_079 igs psbN|psbH psbN-psbH 91077 91178 0 102 LSC 0.004456 1 0 300 132 no 0.000000 2 0.000000 0.004456 1.000000 31.900000 psbH gene psbH psbH 91179 91400 1 222 LSC 0.004095 4 0 75 175 no 0.090909 5 0.400000 0.004095 1.000000 30.200000 IGS_080 igs psbH|petB psbH-petB 91401 91523 0 123 LSC 0.001478 2 0 87 52 no 0.090909 3 0.666667 0.001478 1.000000 27.100000 petB gene petB petB 91524 92938 1 1415 LSC 0.005712 37 1 210 232 no 0.545455 15 0.800000 0.005712 1.000000 56.200000 IGS_081 igs petB|petD petB-petD 92939 93133 0 195 LSC 0.002753 5 1 234 37 no 0.227273 6 0.833333 0.002756 1.000000 30.900000 petD gene petD petD 93134 94407 1 1274 LSC 0.006086 29 16 300 33 no 0.409091 13 0.692308 0.006112 0.998430 42.200000 IGS_082 igs petD|rps18 petD-rps18 94408 97129 0 2722 LSC 0.020826 250 686 69 2 no 1.000000 22 1.000000 0.020160 0.997061 67.900000 rps18 gene rps18 rps18 97130 97270 -1 141 LSC 0.015720 9 43 49 29 no 0.272727 11 0.545455 0.016062 1.000000 46.900000 IGS_083 igs rps18|rps3 rps18-rps3 97271 97316 0 46 LSC 0.011105 3 0 46 9 no 0.045455 4 0.250000 0.011105 1.000000 33.400000 rps3 gene rps3 rps3 97317 98030 -1 714 LSC 0.010083 31 0 16 9 no 0.409091 14 0.642857 0.010083 1.000000 43.300000 rpl22 gene rpl22 rpl22 98015 98479 -1 465 LSC 0.004953 14 0 165 82 no 0.181818 10 0.400000 0.004953 1.000000 37.700000 IGS_085 igs rpl22|rps19 rpl22-rps19 98480 98524 0 45 LSC 0.002020 1 0 215 37 no 0.045455 2 0.500000 0.002020 1.000000 26.100000 rps19 gene rps19 rps19 98525 98803 -1 279 LSC 0.002746 3 0 260 40 no 0.090909 5 0.400000 0.002746 1.000000 26.000000 IGS_086 igs rps19|rpl2 rps19-rpl2 98804 98855 0 52 LSC 0.030303 4 0 241 93 no 0.090909 4 0.500000 0.030303 1.000000 50.700000 rpl2 gene rpl2 rpl2 98856 99659 -1 804 LSC 0.003957 14 0 9 178 no 0.363636 12 0.666667 0.003957 1.000000 36.500000 IGS_087 igs rpl2|rpl23 rpl2-rpl23 99660 99663 0 4 LSC 0.000000 0 0 300 174 no 0.000000 1 0.000000 NA 1.000000 31.800000 rpl23 gene rpl23 rpl23 99664 99951 -1 288 LSC 0.004440 7 9 300 1 no 0.181818 7 0.571429 0.004145 1.000000 31.000000 IGS_088 igs rpl23|trnI-CAU rpl23-trnI-CAU 99952 100331 0 380 LSC 0.021495 33 26 94 21 no 0.590909 17 0.764706 0.020422 0.978947 58.700000 trnI-CAU tRNA trnI-CAU trnI-CAU 100332 100402 -1 71 LSC 0.022371 7 13 0 30 no 0.090909 7 0.285714 0.021677 1.000000 48.200000 IGS_089 igs trnI-CAU|trnL-CAA trnI-CAU-trnL-CAA 100403 104343 0 3941 LSC 0.013427 258 240 12 16 no 0.818182 20 0.900000 0.013408 0.997970 56.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 104344 104424 -1 81 LSC 0.011811 3 1 14 15 no 0.000000 4 0.000000 0.011853 1.000000 31.300000 IGS_090 igs trnL-CAA|ndhB trnL-CAA-ndhB 104425 104980 0 556 LSC 0.010137 30 1 6 180 no 0.500000 14 0.785714 0.010140 1.000000 45.400000 ndhB gene ndhB ndhB 104981 107144 -1 2164 LSC 0.004583 50 0 86 60 no 0.727273 19 0.842105 0.004583 1.000000 46.700000 IGS_091 igs ndhB|rps7 ndhB-rps7 107145 108037 0 893 LSC 0.016254 71 41 155 102 no 0.590909 17 0.764706 0.016257 1.000000 66.600000 rps7 gene rps7 rps7 108038 108505 -1 468 LSC 0.005458 14 0 92 25 no 0.409091 12 0.750000 0.005458 1.000000 38.000000 IGS_092 igs rps7|rps12 rps7-rps12 108506 108559 0 54 LSC 0.015561 5 4 137 115 no 0.227273 8 0.625000 0.011644 0.981481 55.400000 rps12_part2 gene rps12 rps12 108560 109353 -1 794 LSC 0.008107 28 0 26 101 no 0.590909 16 0.812500 0.008107 1.000000 46.100000 IGS_093 igs rps12|trnV-GAC rps12-trnV-GAC 109354 111278 0 1925 LSC 0.015457 135 880 52 300 no 0.818182 20 0.900000 0.015848 0.992208 63.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 111279 111350 1 72 IRb 0.000000 0 0 119 265 no 0.000000 1 0.000000 0.000000 1.000000 27.700000 IGS_094 igs trnV-GAC|trnI-CAU trnV-GAC-trnI-CAU 111351 111808 0 458 IRb 0.007740 26 119 191 160 no 0.545455 16 0.750000 0.007421 0.984716 60.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 111809 111882 -1 74 IRb 0.002560 1 74 81 86 no 0.000000 3 0.000000 0.002560 1.000000 31.100000 IGS_095 igs trnI-CAU|rrn16S trnI-CAU-rrn16S 111883 114339 0 2457 IRb 0.083224 740 1948 155 56 yes 0.909091 21 0.952381 0.076329 0.993488 82.800000 rrn16S rRNA rrn16S rrn16S 114340 115806 1 1467 IRb 0.002786 19 2 90 229 no 0.272727 10 0.600000 0.002788 0.999318 39.900000 IGS_096 igs rrn16S|trnI-GAU rrn16S-trnI-GAU 115807 116129 0 323 IRb 0.001045 2 0 23 300 no 0.045455 3 0.333333 0.001045 1.000000 23.100000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 116130 116171 1 42 IRb 0.000000 0 0 93 300 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 117107 117143 1 37 IRb 0.000000 0 0 300 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_099 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 117144 117210 0 67 IRb 0.012858 3 3 300 241 no 0.045455 5 0.200000 0.013394 0.955224 50.100000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 117211 117248 1 38 IRb 0.000000 0 0 11 203 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 118055 118090 1 36 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_102 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 118091 118226 0 136 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 118227 121054 1 2828 IRb 0.000753 11 10 300 155 no 0.318182 9 0.777778 0.000754 0.999646 41.100000 IGS_103 igs rrn23S|rrn5S rrn23S-rrn5S 121055 121622 0 568 IRb 0.004306 6 107 300 281 no 0.545455 15 0.800000 0.003776 0.994718 58.300000 rrn5S rRNA rrn5S rrn5S 121623 121740 1 118 IRb 0.000000 0 4 80 163 no 0.045455 2 0.500000 0.000000 1.000000 29.800000 IGS_104 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 121741 121996 0 256 IRb 0.004380 7 0 198 249 no 0.090909 5 0.400000 0.004380 1.000000 40.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 121997 122070 1 74 IRb 0.000000 0 0 92 175 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_105 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 122071 122681 0 611 IRb 0.003755 10 5 166 300 no 0.454545 14 0.714286 0.003743 1.000000 50.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 122682 122753 -1 72 IRb 0.000000 0 0 224 254 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_106 igs trnN-GUU|rpl22 trnN-GUU-rpl22 122754 123020 0 267 IRb 0.002464 3 0 296 294 no 0.000000 3 0.000000 0.002464 1.000000 36.300000 rpl22 gene rpl22 rpl22 123021 123260 1 240 IRb 0.001479 3 1 12 54 no 0.136364 5 0.600000 0.001482 1.000000 24.900000 IGS_107 igs rpl22|ndhH rpl22-ndhH 123261 128521 0 5261 IRb 0.003868 88 75 252 300 no 0.909091 21 0.952381 0.003876 0.998479 56.300000 ndhH gene ndhH ndhH 128522 129703 1 1182 IRb 0.000077 1 1 205 102 no 0.090909 3 0.666667 0.000077 1.000000 34.600000 IGS_108 igs ndhH|ndhA ndhH-ndhA 129704 129704 0 1 IRb 0.000000 0 0 300 101 no 0.000000 1 0.000000 NA 1.000000 26.300000 ndhA gene ndhA ndhA 129705 131895 1 2191 IRb 0.001825 19 10 300 300 no 0.681818 18 0.833333 0.001607 0.997262 53.700000 IGS_109 igs ndhA|ndhI ndhA-ndhI 131896 131994 0 99 IRb 0.000918 1 0 300 300 no 0.045455 2 0.500000 0.000918 1.000000 36.300000 ndhI gene ndhI ndhI 131995 132528 1 534 IRb 0.000170 1 0 300 300 no 0.045455 2 0.500000 0.000170 1.000000 39.800000 IGS_110 igs ndhI|trnI-CAU ndhI-trnI-CAU 132529 135077 0 2549 IRb 0.017255 285 2158 300 41 no 1.000000 22 1.000000 0.025110 0.996862 69.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 135078 135150 -1 73 IRb 0.067580 28 73 80 110 no 0.090909 4 0.500000 0.099043 1.000000 64.100000 IGS_111 igs trnI-CAU|trnM-CAU trnI-CAU-trnM-CAU 135151 137605 0 2455 IRb 0.102945 1012 2455 31 124 yes 0.863636 20 0.950000 0.137486 0.915275 75.500000 trnM-CAU tRNA trnM-CAU trnM-CAU 137606 137677 -1 72 IRb 0.015625 9 72 119 52 no 0.045455 3 0.333333 0.041667 1.000000 43.000000 IGS_112 igs trnM-CAU|trnI-CAU trnM-CAU-trnI-CAU 137678 137888 0 211 IRb 0.033136 47 211 191 32 no 0.181818 8 0.500000 0.055484 1.000000 52.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 137889 137966 -1 78 IRb 0.031982 18 78 37 114 no 0.136364 5 0.600000 0.064077 0.948718 50.300000 IGS_113 igs trnI-CAU|rps16 trnI-CAU-rps16 137967 142035 0 4069 IRb 0.077970 1153 3993 45 158 yes 1.000000 22 1.000000 0.072280 0.954534 76.800000 rps16 gene rps16 rps16 142036 143165 1 1130 IRb 0.004492 22 100 102 65 no 0.863636 20 0.950000 0.003827 0.995575 56.500000 IGS_114 igs rps16|psaI rps16-psaI 143166 146989 0 3824 IRb 0.023291 454 2602 51 140 yes 1.000000 22 1.000000 0.024180 0.997908 69.900000 psaI gene psaI psaI 146990 147100 1 111 IRb 0.001560 1 0 83 29 no 0.000000 2 0.000000 0.001560 1.000000 22.800000 IGS_115 igs psaI|ycf4 psaI-ycf4 147101 147528 0 428 IRb 0.003020 7 5 194 300 no 0.272727 12 0.500000 0.002981 0.995327 45.800000 ycf4 gene ycf4 ycf4 147529 148083 1 555 IRb 0.000328 2 0 143 0 no 0.090909 3 0.666667 0.000328 1.000000 26.400000 IGS_116 igs ycf4|cemA ycf4-cemA 148084 148304 0 221 IRb 0.003878 5 0 300 170 no 0.227273 7 0.714286 0.003878 1.000000 40.300000 cemA gene cemA cemA 148305 148994 1 690 IRb 0.001776 3 1 125 29 no 0.045455 4 0.250000 0.001776 1.000000 29.500000 IGS_117 igs cemA|ndhG cemA-ndhG 148995 151644 0 2650 IRb 0.002559 39 4 75 271 no 0.681818 18 0.833333 0.002545 0.999623 44.200000 ndhG gene ndhG ndhG 151645 152178 1 534 IRb 0.001913 7 3 65 88 no 0.181818 7 0.571429 0.001915 1.000000 35.100000 IGS_118 igs ndhG|ndhE ndhG-ndhE 152179 152404 0 226 IRb 0.003046 3 0 262 300 no 0.090909 4 0.500000 0.003046 1.000000 38.500000 ndhE gene ndhE ndhE 152405 152710 1 306 IRb 0.000863 2 0 137 218 no 0.045455 3 0.333333 0.000863 1.000000 31.200000 IGS_119 igs ndhE|psaC ndhE-psaC 152711 152954 0 244 IRb 0.005464 9 0 300 116 no 0.363636 10 0.800000 0.005464 1.000000 41.300000 psaC gene psaC psaC 152955 153200 1 246 IRb 0.001637 2 0 25 79 no 0.045455 3 0.333333 0.001637 1.000000 23.200000 IGS_120 igs psaC|ccsA psaC-ccsA 153201 155081 0 1881 IRb 0.002552 23 7 129 133 no 0.636364 18 0.777778 0.002507 0.997873 48.900000 ccsA gene ccsA ccsA 155082 156044 -1 963 IRb 0.001991 11 0 35 300 no 0.363636 10 0.800000 0.001991 1.000000 36.800000 IGS_121 igs ccsA|trnL-UAG ccsA-trnL-UAG 156045 156141 0 97 IRb 0.000000 0 2 300 300 no 0.045455 3 0.333333 0.000000 1.000000 37.100000 trnL-UAG tRNA trnL-UAG trnL-UAG 156142 156221 -1 80 IRb 0.000000 0 0 300 245 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_122 igs trnL-UAG|rpl32 trnL-UAG-rpl32 156222 157022 0 801 IRb 0.008923 25 528 300 207 no 0.500000 15 0.733333 0.008049 1.000000 61.700000 rpl32 gene rpl32 rpl32 157023 157226 -1 204 IRb 0.001294 2 0 121 3 no 0.090909 3 0.666667 0.001294 1.000000 22.500000 IGS_123 igs rpl32|ndhF rpl32-ndhF 157227 157935 0 709 IRb 0.045309 120 72 300 39 yes 0.909091 21 0.952381 0.043004 0.968970 82.700000 ndhF gene ndhF ndhF 157936 160179 1 2244 SSC 0.015526 152 1 7 22 no 1.000000 22 1.000000 0.015527 1.000000 58.200000 IGS_124 igs ndhF|rpl32 ndhF-rpl32 160180 160618 0 439 IRa 0.017920 35 23 6 300 no 0.818182 20 0.900000 0.016659 0.981777 60.900000 rpl32 gene rpl32 rpl32 160619 160822 1 204 IRa 0.001294 2 0 3 121 no 0.090909 3 0.666667 0.001294 1.000000 22.500000 IGS_125 igs rpl32|trnL-UAG rpl32-trnL-UAG 160823 161623 0 801 IRa 0.008923 25 528 207 300 no 0.500000 15 0.733333 0.008049 1.000000 61.700000 trnL-UAG tRNA trnL-UAG trnL-UAG 161624 161703 1 80 IRa 0.000000 0 0 245 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_126 igs trnL-UAG|ccsA trnL-UAG-ccsA 161704 161800 0 97 IRa 0.000000 0 1 300 300 no 0.000000 2 0.000000 0.000000 1.000000 35.000000 ccsA gene ccsA ccsA 161801 162763 1 963 IRa 0.001991 11 0 300 35 no 0.363636 10 0.800000 0.001991 1.000000 36.800000 IGS_127 igs ccsA|psaC ccsA-psaC 162764 164644 0 1881 IRa 0.002552 23 7 133 129 no 0.636364 18 0.777778 0.002507 0.997873 48.900000 psaC gene psaC psaC 164645 164890 -1 246 IRa 0.001637 2 0 79 25 no 0.045455 3 0.333333 0.001637 1.000000 23.200000 IGS_128 igs psaC|ndhE psaC-ndhE 164891 165134 0 244 IRa 0.005464 9 0 116 300 no 0.363636 10 0.800000 0.005464 1.000000 41.300000 ndhE gene ndhE ndhE 165135 165440 -1 306 IRa 0.000863 2 0 218 137 no 0.045455 3 0.333333 0.000863 1.000000 31.200000 IGS_129 igs ndhE|ndhG ndhE-ndhG 165441 165666 0 226 IRa 0.003046 3 0 300 262 no 0.090909 4 0.500000 0.003046 1.000000 38.500000 ndhG gene ndhG ndhG 165667 166200 -1 534 IRa 0.001913 7 3 88 65 no 0.181818 7 0.571429 0.001915 1.000000 35.100000 IGS_130 igs ndhG|cemA ndhG-cemA 166201 168850 0 2650 IRa 0.002600 39 4 271 75 no 0.681818 18 0.833333 0.002600 0.999623 44.200000 cemA gene cemA cemA 168851 169540 -1 690 IRa 0.001776 3 1 29 125 no 0.045455 4 0.250000 0.001776 1.000000 29.500000 IGS_131 igs cemA|ycf4 cemA-ycf4 169541 169761 0 221 IRa 0.003878 5 0 170 300 no 0.227273 7 0.714286 0.003878 1.000000 40.300000 ycf4 gene ycf4 ycf4 169762 170316 -1 555 IRa 0.000328 2 0 0 143 no 0.090909 3 0.666667 0.000328 1.000000 26.400000 IGS_132 igs ycf4|psaI ycf4-psaI 170317 170744 0 428 IRa 0.002994 7 3 300 194 no 0.272727 12 0.500000 0.003010 0.995327 45.200000 psaI gene psaI psaI 170745 170855 -1 111 IRa 0.001560 1 0 28 83 no 0.000000 2 0.000000 0.001560 1.000000 22.700000 IGS_133 igs psaI|rps19 psaI-rps19 170856 172839 0 1984 IRa 0.023477 260 1561 139 187 yes 0.818182 20 0.900000 0.023050 0.997984 76.300000 rps19 gene rps19 rps19 172840 172989 -1 150 IRa 0.004000 5 150 60 37 no 0.181818 6 0.666667 0.004247 1.000000 33.800000 IGS_134 igs rps19|rps16 rps19-rps16 172990 174679 0 1690 IRa 0.024431 191 890 210 51 yes 0.818182 20 0.900000 0.026359 0.998225 71.400000 rps16 gene rps16 rps16 174680 175809 -1 1130 IRa 0.004589 22 96 65 95 no 0.863636 20 0.950000 0.004116 0.995575 56.500000 IGS_135 igs rps16|rps19 rps16-rps19 175810 176788 0 979 IRa 0.063330 269 824 158 5 yes 1.000000 22 1.000000 0.071588 0.980592 82.900000 rps19 gene rps19 rps19 176789 176968 -1 180 IRa 0.018704 31 180 62 73 no 0.181818 7 0.571429 0.049885 1.000000 50.200000 IGS_136 igs rps19|trnI-CAU rps19-trnI-CAU 176969 179878 0 2910 IRa 0.097767 1022 2887 174 115 yes 1.000000 22 1.000000 0.110293 0.958076 83.900000 trnI-CAU tRNA trnI-CAU trnI-CAU 179879 179956 1 78 IRa 0.026956 19 78 30 37 no 0.136364 5 0.600000 0.051280 0.948718 48.900000 IGS_137 igs trnI-CAU|trnM-CAU trnI-CAU-trnM-CAU 179957 180167 0 211 IRa 0.028320 49 211 108 191 no 0.181818 9 0.444444 0.046618 1.000000 58.200000 trnM-CAU tRNA trnM-CAU trnM-CAU 180168 180239 1 72 IRa 0.012500 9 72 104 119 no 0.045455 3 0.333333 0.033333 1.000000 48.000000 IGS_138 igs trnM-CAU|trnI-CAU trnM-CAU-trnI-CAU 180240 182694 0 2455 IRa 0.104651 1054 2435 176 30 yes 0.909091 21 0.952381 0.116680 0.949491 76.700000 trnI-CAU tRNA trnI-CAU trnI-CAU 182695 182767 1 73 IRa 0.084571 23 73 38 0 no 0.000000 3 0.000000 0.140311 1.000000 55.500000 IGS_139 igs trnI-CAU|ndhI trnI-CAU-ndhI 182768 185316 0 2549 IRa 0.015787 251 2218 0 300 no 1.000000 22 1.000000 0.022315 0.996862 64.800000 ndhI gene ndhI ndhI 185317 185850 -1 534 IRa 0.000170 1 0 300 300 no 0.045455 2 0.500000 0.000170 1.000000 39.800000 IGS_140 igs ndhI|ndhA ndhI-ndhA 185851 185949 0 99 IRa 0.000918 1 0 300 300 no 0.045455 2 0.500000 0.000918 1.000000 36.300000 ndhA gene ndhA ndhA 185950 188140 -1 2191 IRa 0.001938 20 10 300 300 no 0.681818 18 0.833333 0.001720 0.997262 53.800000 IGS_141 igs ndhA|ndhH ndhA-ndhH 188141 188141 0 1 IRa 0.000000 0 0 101 300 no 0.000000 1 0.000000 NA 1.000000 26.300000 ndhH gene ndhH ndhH 188142 189323 -1 1182 IRa 0.000077 1 1 102 205 no 0.090909 3 0.666667 0.000077 1.000000 34.600000 IGS_142 igs ndhH|rps15 ndhH-rps15 189324 189410 0 87 IRa 0.000000 0 0 300 118 no 0.000000 1 0.000000 0.000000 1.000000 27.600000 rps15 gene rps15 rps15 189411 189689 -1 279 IRa 0.004857 4 0 300 128 no 0.136364 5 0.600000 0.004857 1.000000 34.900000 IGS_143 igs rps15|trnN-GUU rps15-trnN-GUU 189690 195091 0 5402 IRa 0.003920 96 93 82 296 no 0.818182 20 0.900000 0.003890 0.998704 46.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 195092 195163 1 72 IRa 0.000000 0 0 254 224 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_144 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 195164 195774 0 611 IRa 0.003755 10 5 300 166 no 0.454545 14 0.714286 0.003743 1.000000 50.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 195775 195848 -1 74 IRa 0.000000 0 0 175 92 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_145 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 195849 196104 0 256 IRa 0.004380 7 0 249 198 no 0.090909 5 0.400000 0.004380 1.000000 40.700000 rrn5S rRNA rrn5S rrn5S 196105 196222 -1 118 IRa 0.000000 0 4 163 80 no 0.045455 2 0.500000 0.000000 1.000000 29.800000 IGS_146 igs rrn5S|rrn23S rrn5S-rrn23S 196223 196790 0 568 IRa 0.004280 6 67 281 300 no 0.454545 14 0.714286 0.003734 0.994718 56.600000 rrn23S rRNA rrn23S rrn23S 196791 199618 -1 2828 IRa 0.000753 11 10 155 300 no 0.318182 9 0.777778 0.000754 0.999646 41.100000 IGS_147 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 199619 199754 0 136 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 199755 199790 -1 36 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 200597 200634 -1 38 IRa 0.000000 0 0 203 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_150 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 200635 200701 0 67 IRa 0.012858 3 3 241 300 no 0.045455 5 0.200000 0.013394 0.955224 50.100000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 200702 200738 -1 37 IRa 0.000000 0 0 4 300 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 201674 201715 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_153 igs trnI-GAU|rrn16S trnI-GAU-rrn16S 201716 202069 0 354 IRa 0.003094 5 0 300 58 no 0.045455 5 0.200000 0.003094 1.000000 28.200000 rrn16S rRNA rrn16S rrn16S 202070 203505 -1 1436 IRa 0.002330 17 2 7 90 no 0.363636 11 0.727273 0.002332 0.999304 35.000000 IGS_154 igs rrn16S|trnI-CAU rrn16S-trnI-CAU 203506 205962 0 2457 IRa 0.079718 698 2147 56 9 yes 0.909091 21 0.952381 0.068192 0.990639 78.500000 trnI-CAU tRNA trnI-CAU trnI-CAU 205963 206036 1 74 IRa 0.002687 1 74 86 81 no 0.000000 3 0.000000 0.002687 1.000000 29.700000 IGS_155 igs trnI-CAU|trnV-GAC trnI-CAU-trnV-GAC 206037 206494 0 458 IRa 0.008265 26 458 64 191 no 0.636364 17 0.823529 0.007879 0.984716 52.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 206495 206566 -1 72 IRa 0.000000 0 72 265 119 no 0.045455 2 0.500000 0.000000 1.000000 33.400000 IGS_156 igs trnV-GAC|psbA trnV-GAC-psbA 206567 545 0 1457 IRa 0.022079 133 1148 300 29 no 0.909091 21 0.952381 0.024477 0.987646 69.100000