Hotspot

trnT-UGU-trnL-UAA

LSC · 50339-51569 · 1231 bp

Back to Rhamnus

Pi 0.003
MarkerSeek score 59.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AACAGATGGAGAAAAGCCGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.2 58.0 1178-1363 bp 1.0 83.2
trnT-UGU-trnL-UAA_p2 AACAGATGGAGAAAAGCCGG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.2 58.1 1186-1371 bp 1.0 82.7
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1153-1338 bp 1.0 82.7
trnT-UGU-trnL-UAA_p4 ATGGAGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1173-1358 bp 1.0 82.5
trnT-UGU-trnL-UAA_p5 GATGGAGAAAAGCCGGCTAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1174-1359 bp 1.0 82.5