primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score matK-tRNA-Lys_p1 matK-tRNA-Lys 1 TGTTGCCAAGAGCTATCTTCC TAACCTCGCATTCCACTTCG 21 20 47.6 50.0 58.0 58.0 0.0 0.0 1.013332 3371 4154 921-921 1.000000 72.6 matK-tRNA-Lys_p2 matK-tRNA-Lys 2 GCATTGTTGCCAAGAGCTATC TAACCTCGCATTCCACTTCG 21 20 47.6 50.0 57.9 58.0 0.0 0.0 1.080448 3371 4154 925-925 1.000000 72.0 matK-tRNA-Lys_p3 matK-tRNA-Lys 3 TGTTGCCAAGAGCTATCTTCC CGCATTCCACTTCGATCGTA 21 20 47.6 50.0 58.0 58.2 0.0 15.9 1.173629 3371 4154 915-915 1.000000 71.3 matK-tRNA-Lys_p4 matK-tRNA-Lys 4 GCATTGTTGCCAAGAGCTATC CGCATTCCACTTCGATCGTA 21 20 47.6 50.0 57.9 58.2 0.0 15.9 1.240745 3371 4154 919-919 1.000000 70.8 matK-tRNA-Lys_p5 matK-tRNA-Lys 5 GCATTGTTGCCAAGAGCTAT TAACCTCGCATTCCACTTCG 20 20 45.0 50.0 56.8 58.0 0.0 0.0 1.246481 3371 4154 925-925 1.000000 70.7 ycf12-clpP_p1 ycf12-clpP 1 AGTCGATGGGATCATAGGGG AGCATCGTTACGTGTTTCGA 20 20 55.0 45.0 58.1 57.9 0.0 4.2 0.110510 8634 9052 1004-1092 1.000000 81.5 ycf12-clpP_p2 ycf12-clpP 2 AGTCGATGGGATCATAGGGG CTCGTTGAATGACCTCTCCG 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.141189 8634 9052 1069-1157 1.000000 81.2 ycf12-clpP_p3 ycf12-clpP 3 AGTCGATGGGATCATAGGGG CGTTATGAAAATCTGCGGCC 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.161146 8634 9052 982-1070 1.000000 81.1 ycf12-clpP_p4 ycf12-clpP 4 AGTCGATGGGATCATAGGGG GTTATGAAAATCTGCGGCCG 20 20 55.0 50.0 58.1 57.9 0.0 24.0 0.161146 8634 9052 981-1069 1.000000 81.1 ycf12-clpP_p5 ycf12-clpP 5 GGTTGTATCGGGCCCATTAG AGCATCGTTACGTGTTTCGA 20 20 55.0 45.0 58.1 57.9 24.9 4.2 0.162478 8634 9052 926-926 0.333333 52.0 petL-psbE_p1 petL-psbE 1 GCGTGGAAGGACTGAATGAA AATGTCAGCAAAGGAGCGTT 20 20 50.0 45.0 58.2 58.4 0.0 0.0 0.582381 13452 14660 1091-1303 1.000000 79.8 petL-psbE_p2 petL-psbE 2 GCGTGGAAGGACTGAATGAA GTATTCCCAGCCATGCTCAG 20 20 50.0 55.0 58.2 58.4 0.0 0.0 0.589279 13452 14660 1066-1278 1.000000 79.7 petL-psbE_p3 petL-psbE 3 GCGTGGAAGGACTGAATGAA TAATGTCAGCAAAGGAGCGT 20 20 50.0 45.0 58.2 57.5 0.0 0.0 0.664285 13452 14660 1092-1304 1.000000 79.1 petL-psbE_p4 petL-psbE 4 TAGGCGTGGAAGGACTGAAT AATGTCAGCAAAGGAGCGTT 20 20 50.0 45.0 58.4 58.4 0.0 0.0 0.822288 13452 14660 1094-1306 1.000000 77.8 petL-psbE_p5 petL-psbE 5 TAGGCGTGGAAGGACTGAAT GTATTCCCAGCCATGCTCAG 20 20 50.0 55.0 58.4 58.4 0.0 0.0 0.829185 13452 14660 1069-1281 1.000000 77.8 psbJ-petA_p1 psbJ-petA 1 TGGAAGGATCCCTCTTTGGT AGCATCTGTCATTCTGGCAC 20 20 50.0 50.0 57.9 58.3 8.6 0.0 0.312047 15438 16485 1242-1288 1.000000 78.5 psbJ-petA_p2 psbJ-petA 2 TACCACTGGAAGGATCCCTC AGCATCTGTCATTCTGGCAC 20 20 55.0 50.0 57.8 58.3 8.6 0.0 0.428538 15438 16485 1248-1294 1.000000 77.6 psbJ-petA_p3 psbJ-petA 3 TGGAAGGATCCCTCTTTGGT GCATCTGTCATTCTGGCACA 20 20 50.0 50.0 57.9 58.5 8.6 0.0 0.603460 15438 16485 1241-1287 1.000000 76.2 psbJ-petA_p4 psbJ-petA 4 CCACTGGAAGGATCCCTCTT AGCATCTGTCATTCTGGCAC 20 20 55.0 50.0 58.4 58.3 8.6 0.0 0.662876 15438 16485 1246-1292 1.000000 75.7 psbJ-petA_p5 psbJ-petA 5 TACCACTGGAAGGATCCCTC GCATCTGTCATTCTGGCACA 20 20 55.0 50.0 57.8 58.5 8.6 0.0 0.719951 15438 16485 1247-1293 1.000000 75.2 ycf4-psaI_p1 ycf4-psaI 1 GAGCCATTTGGATCGACGAT TTTCCGCTCTCCGAAATCAG 20 20 50.0 50.0 58.1 58.0 10.8 0.0 0.139065 19843 20385 1022-1025 1.000000 80.5 ycf4-psaI_p2 ycf4-psaI 2 AGGGGTATCAGGTTCTCACC TTTCCGCTCTCCGAAATCAG 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.129204 19843 20385 1150-1153 1.000000 80.4 ycf4-psaI_p3 ycf4-psaI 3 ACTCGAAATACCGACCAGGA TTTCCGCTCTCCGAAATCAG 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.166777 19843 20385 1124-1127 1.000000 80.2 ycf4-psaI_p4 ycf4-psaI 4 CGACGAGGGGAAATACCTTC TTTCCGCTCTCCGAAATCAG 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.230624 19843 20385 1417-1420 1.000000 79.5 ycf4-psaI_p5 ycf4-psaI 5 TTCAGCAGCTTTCTGTTCGA TTTCCGCTCTCCGAAATCAG 20 20 45.0 50.0 57.8 58.0 11.3 0.0 0.249087 19843 20385 1514-1517 1.000000 79.3 tRNA-Thr-tRNA-Ser_p1 tRNA-Thr-tRNA-Ser 1 GAACCGATGACTTACGCCTT TAGTGACCGAACGGAGAGAG 20 20 50.0 55.0 58.0 58.3 0.0 20.1 0.270584 29209 30388 1334-1347 1.000000 79.2 tRNA-Thr-tRNA-Ser_p2 tRNA-Thr-tRNA-Ser 2 GAACCGATGACTTACGCCTT CGGAGAGAGAGGGATTCGAA 20 20 50.0 55.0 58.0 58.3 0.0 0.0 0.324433 29209 30388 1323-1336 1.000000 78.8 tRNA-Thr-tRNA-Ser_p3 tRNA-Thr-tRNA-Ser 3 CCATGGCGTTACTCTACCAC TAGTGACCGAACGGAGAGAG 20 20 55.0 55.0 58.1 58.3 0.0 20.1 0.328681 29209 30388 1313-1326 1.000000 78.8 tRNA-Thr-tRNA-Ser_p4 tRNA-Thr-tRNA-Ser 4 TGGCGTTACTCTACCACTGA TAGTGACCGAACGGAGAGAG 20 20 50.0 55.0 58.1 58.3 0.0 20.1 0.350836 29209 30388 1310-1323 1.000000 78.6 tRNA-Thr-tRNA-Ser_p5 tRNA-Thr-tRNA-Ser 5 CGTGTAAGACGGACATCCAG TAGTGACCGAACGGAGAGAG 20 20 55.0 55.0 58.1 58.3 0.0 20.1 0.355238 29209 30388 1399-1412 1.000000 78.5 tRNA-Tyr-tRNA-Ser_p1 tRNA-Tyr-tRNA-Ser 1 CTGGTTCAAATCCAGCTCGA ATTTGAACCAGCGTAGGCAT 20 20 50.0 45.0 57.9 57.9 0.0 10.5 0.227912 31235 31531 323-577 1.000000 86.4 tRNA-Tyr-tRNA-Ser_p2 tRNA-Tyr-tRNA-Ser 2 CTGGTTCAAATCCAGCTCGA TGGATTTGAACCAGCGTAGG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.207091 31235 31531 396-669 1.000000 86.1 tRNA-Tyr-tRNA-Ser_p3 tRNA-Tyr-tRNA-Ser 3 AGTGGACCAGGACATCTCTC TTGACAGGGCGGTACTCTAA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.213211 31235 31531 892-1216 1.000000 84.5 tRNA-Tyr-tRNA-Ser_p4 tRNA-Tyr-tRNA-Ser 4 GTGGACCAGGACATCTCTCT TTGACAGGGCGGTACTCTAA 20 20 55.0 50.0 58.1 58.1 0.0 0.0 0.213211 31235 31531 891-1215 1.000000 84.5 tRNA-Tyr-tRNA-Ser_p5 tRNA-Tyr-tRNA-Ser 5 CACGTGCGTGTGAAAAGAAA TTGACAGGGCGGTACTCTAA 20 20 45.0 50.0 57.8 58.1 15.6 0.0 0.239254 31235 31531 1121-1440 1.000000 84.3 tRNA-Ser_p1 tRNA-Ser 1 TTGAAATCCGTTGGCAAGGA CGTGAGCGCTAAGTCGATTA 20 20 45.0 50.0 58.0 57.9 20.6 11.5 0.112759 31532 31616 443-484 1.000000 87.1 tRNA-Ser_p2 tRNA-Ser 2 TTGAAATCCGTTGGCAAGGA TTGACAGGGCGGTACTCTAA 20 20 45.0 50.0 58.0 58.1 20.6 0.0 0.084219 31532 31616 595-621 1.000000 86.4 tRNA-Ser_p3 tRNA-Ser 3 TTGAAATCCGTTGGCAAGGA AGGGCGGTACTCTAACCAAT 20 20 45.0 50.0 58.0 58.1 20.6 0.0 0.136218 31532 31616 590-616 1.000000 86.0 tRNA-Ser_p4 tRNA-Ser 4 TTGAAATCCGTTGGCAAGGA CCACTCATGACCCTGGAATG 20 20 45.0 55.0 58.0 58.0 20.6 0.0 0.060151 31532 31616 1023-1049 1.000000 85.7 tRNA-Ser_p5 tRNA-Ser 5 CACGAGGACGGACTTGAAAT CCACTCATGACCCTGGAATG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.128730 31532 31616 941-1381 1.000000 82.5 tRNA-Asp-psbM_p1 tRNA-Asp-psbM 1 TTAGAGTACCGCCCTGTCAA AGCTCGCTCGAGATTTGATC 20 20 50.0 50.0 58.1 57.9 0.0 18.7 0.205253 31951 32682 835-840 1.000000 79.3 tRNA-Asp-psbM_p2 tRNA-Asp-psbM 2 TTAGAGTACCGCCCTGTCAA GCTCGCTCGAGATTTGATCT 20 20 50.0 50.0 58.1 57.9 0.0 18.7 0.205253 31951 32682 834-839 1.000000 79.3 tRNA-Asp-psbM_p3 tRNA-Asp-psbM 3 ATTGGTTAGAGTACCGCCCT AGCTCGCTCGAGATTTGATC 20 20 50.0 50.0 58.1 57.9 0.0 18.7 0.257252 31951 32682 840-845 1.000000 78.9 tRNA-Asp-psbM_p4 tRNA-Asp-psbM 4 ATTGGTTAGAGTACCGCCCT GCTCGCTCGAGATTTGATCT 20 20 50.0 50.0 58.1 57.9 0.0 18.7 0.257252 31951 32682 839-844 1.000000 78.9 tRNA-Asp-psbM_p5 tRNA-Asp-psbM 5 TAGAGTACCGCCCTGTCAAG GCTCGCTCGAGATTTGATCT 20 20 55.0 50.0 58.5 57.9 0.0 18.7 0.661621 31951 32682 833-838 1.000000 75.7 infA-rps8_p1 infA-rps8 1 ACTCGAAACATACCGTTGGG AGGTGGAATGGGGATCGTAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.201152 60776 60917 314-319 1.000000 80.4 infA-rps8_p2 infA-rps8 2 TCAGTAACCAAACCTTCCGC AGGTGGAATGGGGATCGTAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.225316 60776 60917 287-292 1.000000 80.4 infA-rps8_p3 infA-rps8 3 AAACCTTCCGCATGGATCAA AGGTGGAATGGGGATCGTAA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.326579 60776 60917 278-283 1.000000 79.7 infA-rps8_p4 infA-rps8 4 AACCTTCCGCATGGATCAAA AGGTGGAATGGGGATCGTAA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.326579 60776 60917 277-282 1.000000 79.7 infA-rps8_p5 infA-rps8 5 AAACATACCGTTGGGGAGTG AGGTGGAATGGGGATCGTAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.306404 60776 60917 309-314 1.000000 79.6 tRNA-Ile-tRNA-Phe_p1 tRNA-Ile-tRNA-Phe 1 GTTGGGCGCTTTAACCATTC CCTCGTGTCACCAGTTCAAA 20 20 50.0 50.0 58.0 58.1 7.6 0.0 0.061097 66970 68910 2007-2021 1.000000 80.7 tRNA-Ile-tRNA-Phe_p2 tRNA-Ile-tRNA-Phe 2 GTTGGGCGCTTTAACCATTC TACCAGGATGATCCACAGGG 20 20 50.0 55.0 58.0 58.2 7.6 14.9 0.202705 66970 68910 2070-2084 1.000000 79.5 tRNA-Ile-tRNA-Phe_p3 tRNA-Ile-tRNA-Phe 3 AGTTGGGCGCTTTAACCATT CCTCGTGTCACCAGTTCAAA 20 20 45.0 50.0 58.4 58.1 7.6 0.0 0.424032 66970 68910 2008-2022 1.000000 77.8 tRNA-Ile-tRNA-Phe_p4 tRNA-Ile-tRNA-Phe 4 TTGGGCGCTTTAACCATTCA CCTCGTGTCACCAGTTCAAA 20 20 45.0 50.0 58.4 58.1 7.6 0.0 0.429904 66970 68910 2006-2020 1.000000 77.7 tRNA-Ile-tRNA-Phe_p5 tRNA-Ile-tRNA-Phe 5 GTTGGGCGCTTTAACCATTC AATCCTCGTGTCACCAGTTC 20 20 50.0 50.0 58.0 57.5 7.6 0.0 0.466567 66970 68910 2010-2024 1.000000 77.4 tRNA-Met-tRNA-Gly_p1 tRNA-Met-tRNA-Gly 1 CTTGAGGTCACGGGTTCAAA ATGCGGGTATGGTTGAATGG 20 20 50.0 50.0 58.0 58.3 4.2 0.0 0.347010 80052 80216 259-271 1.000000 82.4 tRNA-Met-tRNA-Gly_p2 tRNA-Met-tRNA-Gly 2 CTTGAGGTCACGGGTTCAAA GCGGGTATGGTTGAATGGTA 20 20 50.0 50.0 58.0 57.7 4.2 0.0 0.373522 80052 80216 257-269 1.000000 82.2 tRNA-Met-tRNA-Gly_p3 tRNA-Met-tRNA-Gly 3 TGCGGAGTAGAGTAGTCTGG ATGCGGGTATGGTTGAATGG 20 20 55.0 50.0 58.0 58.3 10.5 0.0 0.348622 80052 80216 299-311 1.000000 81.7 tRNA-Met-tRNA-Gly_p4 tRNA-Met-tRNA-Gly 4 GCGGAGTAGAGTAGTCTGGT ATGCGGGTATGGTTGAATGG 20 20 55.0 50.0 58.0 58.3 10.5 0.0 0.350055 80052 80216 298-310 1.000000 81.7 tRNA-Met-tRNA-Gly_p5 tRNA-Met-tRNA-Gly 5 GGTGCGGAGTAGAGTAGTCT ATGCGGGTATGGTTGAATGG 20 20 55.0 50.0 58.0 58.3 5.2 0.0 0.350055 80052 80216 301-313 1.000000 81.7 chlN-rps15_p1 chlN-rps15 1 ACAAAAATGATCGCTCTGT ATAATGGGCCATGGTTGCTC 19 20 36.8 50.0 52.8 58.3 0.0 22.0 6.443360 97573 97722 214-241 1.000000 42.8 chlN-rps15_p2 chlN-rps15 2 ACAAAAATGATCGCTCTGT CATAATGGGCCATGGTTGCT 19 20 36.8 50.0 52.8 58.6 0.0 22.0 6.735458 97573 97722 215-242 1.000000 42.7 chlN-rps15_p3 chlN-rps15 3 ACAAAAATGATCGCTCTGT ACATAATGGGCCATGGTTGC 19 20 36.8 50.0 52.8 58.9 0.0 22.0 7.029475 97573 97722 216-243 1.000000 42.7 chlN-rps15_p4 chlN-rps15 4 ACAAAAATGATCGCTCTGT ATCGTATCGGCCGATAAGCT 19 20 36.8 50.0 52.8 58.8 0.0 39.6 6.976919 97573 97722 252-279 1.000000 42.4 chlN-rps15_p5 chlN-rps15 5 ACAAAAATGATCGCTCTGT TATCGTATCGGCCGATAAGC 19 20 36.8 50.0 52.8 57.2 0.0 39.6 6.990088 97573 97722 253-280 1.000000 42.4 rps15-psaC_p1 rps15-psaC 1 GGGCAAACGTAAGCAACTTC GTACGCATTGGGTACAACCA 20 20 50.0 50.0 58.0 58.2 13.3 29.0 0.235324 103406 104740 1493-1503 1.000000 78.9 rps15-psaC_p2 rps15-psaC 2 TTTGGGCAAACGTAAGCAAC GTACGCATTGGGTACAACCA 20 20 45.0 50.0 57.8 58.2 13.3 29.0 0.400394 103406 104740 1496-1506 1.000000 77.6 rps15-psaC_p3 rps15-psaC 3 GGGCAAACGTAAGCAACTTC ATCTGTGGGACAAGCTCGTA 20 20 50.0 50.0 58.0 58.4 13.3 0.0 0.489184 103406 104740 1510-1520 1.000000 76.9 rps15-psaC_p4 rps15-psaC 4 TTTGGGCAAACGTAAGCAAC ATCTGTGGGACAAGCTCGTA 20 20 45.0 50.0 57.8 58.4 13.3 0.0 0.654254 103406 104740 1513-1523 1.000000 75.6 rps15-psaC_p5 rps15-psaC 5 AAATTGGGTATTCGTGGGCT GTACGCATTGGGTACAACCA 20 20 45.0 50.0 57.5 58.2 0.0 29.0 0.714146 103406 104740 1423-1433 1.000000 75.1 rps12_p1 rps12 1 ATCGAACGAGAAGCCGTATG GTACTTCGCCGTGACATGAG 20 20 50.0 55.0 57.9 58.7 2.9 0.0 0.851950 111047 111847 955-955 1.000000 73.8 rps12_p2 rps12 2 AAGCCGTATGAGGTGCAAAT GTACTTCGCCGTGACATGAG 20 20 45.0 55.0 57.9 58.7 0.0 0.0 0.859605 111047 111847 945-945 1.000000 73.7 rps12_p3 rps12 3 GAACGAGAAGCCGTATGAGG GTACTTCGCCGTGACATGAG 20 20 55.0 55.0 58.2 58.7 0.0 0.0 0.889385 111047 111847 952-952 1.000000 73.5 rps12_p4 rps12 4 ATCGAACGAGAAGCCGTATG GCCGTGACATGAGTGTGAAA 20 20 50.0 50.0 57.9 58.8 2.9 0.0 0.895261 111047 111847 948-948 1.000000 73.4 rps12_p5 rps12 5 AAGCCGTATGAGGTGCAAAT GCCGTGACATGAGTGTGAAA 20 20 45.0 50.0 57.9 58.8 0.0 0.0 0.902916 111047 111847 938-938 1.000000 73.4 rps7-tRNA-Leu_p1 rps7-tRNA-Leu 1 CAGAGGGAATGGCAATGCTA GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.6 58.0 4.8 5.8 0.361187 112368 113763 1513-1928 1.000000 78.9 rps7-tRNA-Leu_p2 rps7-tRNA-Leu 2 TTAATGGATGCTGCCAGAGG GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 57.6 58.0 0.0 5.8 0.361187 112368 113763 1527-1942 1.000000 78.9 rps7-tRNA-Leu_p3 rps7-tRNA-Leu 3 CAGAGGGAATGGCAATGCTA CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.6 58.0 4.8 5.8 0.362557 112368 113763 1511-1926 1.000000 78.9 rps7-tRNA-Leu_p4 rps7-tRNA-Leu 4 TTAATGGATGCTGCCAGAGG CTCGCGTGTCTACCATTTCA 20 20 50.0 50.0 57.6 58.0 0.0 5.8 0.362557 112368 113763 1525-1940 1.000000 78.9 rps7-tRNA-Leu_p5 rps7-tRNA-Leu 5 ACGCAAAAAGGAAGAGACCC GTCTCGCGTGTCTACCATTT 20 20 50.0 50.0 58.4 58.0 0.0 5.8 0.402078 112368 113763 1492-1907 1.000000 78.6 tRNA-His-tRNA-Ile_p1 tRNA-His-tRNA-Ile 1 TCACAATCCACTGCCTTGTC GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.1 58.0 0.0 7.6 0.112981 121120 121412 363-373 1.000000 84.9 tRNA-His-tRNA-Ile_p2 tRNA-His-tRNA-Ile 2 TTCACAATCCACTGCCTTGT GTTGGGCGCTTTAACCATTC 20 20 45.0 50.0 57.6 58.0 0.0 7.6 0.372507 121120 121412 364-374 1.000000 82.8 tRNA-His-tRNA-Ile_p3 tRNA-His-tRNA-Ile 3 TCACAATCCACTGCCTTGTC AGTTGGGCGCTTTAACCATT 20 20 50.0 45.0 58.1 58.4 0.0 7.6 0.475917 121120 121412 364-374 1.000000 82.0 tRNA-His-tRNA-Ile_p4 tRNA-His-tRNA-Ile 4 TCACAATCCACTGCCTTGTC TTGGGCGCTTTAACCATTCA 20 20 50.0 45.0 58.1 58.4 0.0 7.6 0.481788 121120 121412 362-372 1.000000 82.0 tRNA-His-tRNA-Ile_p5 tRNA-His-tRNA-Ile 5 CTTGTCCACTTGGCTACGTC GTTGGGCGCTTTAACCATTC 20 20 55.0 50.0 58.6 58.0 0.0 7.6 0.579738 121120 121412 349-359 1.000000 81.4