primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 57.9 58.0 7.8 0.0 0.089038 6295 7324 1162-1178 1.000000 83.5 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AACGGATCGTGTCCTTCAAG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 7.8 16.9 0.156387 6295 7324 1104-1120 1.000000 83.2 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GAAATTGAAATGGGGCGTGG 20 20 45.0 50.0 58.1 58.0 8.1 0.0 0.148076 6295 7324 1145-1161 1.000000 83.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6295 7324 1087-1103 1.000000 82.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CAACGGATCGTGTCCTTCAA GAAATTGAAATGGGGCGTGG 20 20 50.0 50.0 58.2 58.0 7.8 0.0 0.217997 6295 7324 1163-1179 1.000000 82.4 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 AATGCCTCCCTTTCTCCTGA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.420595 45071 45905 1009-1014 1.000000 79.2 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 ATGCCTCCCTTTCTCCTGAA CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.420595 45071 45905 1008-1013 1.000000 79.2 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 AATGCCTCCCTTTCTCCTGA ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.3 58.2 0.0 0.0 0.477581 45071 45905 1030-1035 1.000000 78.7 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 ATGCCTCCCTTTCTCCTGAA ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 58.3 58.2 0.0 0.0 0.477581 45071 45905 1029-1034 1.000000 78.7 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 ATGCCTCCCTTTCTCCTGAA TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 58.3 57.8 0.0 5.6 0.518896 45071 45905 979-984 1.000000 78.5 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAAATAGGAATAAGACTTGA AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 56.3 57.8 0.0 0.0 5.853835 51347 52397 1154-1167 1.000000 46.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAAATAGGAATAAGACTTGA GAAGGTCTACGGTTCGAGTC 24 20 33.3 55.0 56.3 57.5 0.0 0.0 6.197608 51347 52397 1153-1166 1.000000 46.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCAAAATAGGAATAAGACTTG AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 54.9 57.8 0.0 0.0 6.253715 51347 52397 1154-1167 1.000000 46.3 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAAATAGGAATAAGACTTGA GTTCGAGTCCGTATAGCCCT 24 20 33.3 55.0 56.3 58.7 0.0 0.0 6.339901 51347 52397 1142-1155 1.000000 46.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAAATAGGAATAAGACTTGAT AGAAGGTCTACGGTTCGAGT 25 20 32.0 50.0 56.8 57.8 0.0 0.0 6.395612 51347 52397 1154-1167 1.000000 46.3 rbcL-accD_p1 rbcL-accD 1 TCATGGTATGCACTTCCGTG TCACTATCACTGCTGTTCGC 20 20 50.0 50.0 58.0 58.0 15.5 0.0 0.026473 57663 58345 1791-1796 0.500000 61.4 rbcL-accD_p2 rbcL-accD 2 TTGAATGCTACTGCGGGTAC TCACTATCACTGCTGTTCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.022250 57663 58345 1991-1996 0.500000 61.3 rbcL-accD_p3 rbcL-accD 3 TCTTCACATTCACCGTGCAA TCACTATCACTGCTGTTCGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.043292 57663 58345 1839-1844 0.500000 61.2 rbcL-accD_p4 rbcL-accD 4 TTCTTCACATTCACCGTGCA TCACTATCACTGCTGTTCGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.043292 57663 58345 1840-1845 0.500000 61.2 rbcL-accD_p5 rbcL-accD 5 AATGCTACTGCGGGTACATG TCACTATCACTGCTGTTCGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.050149 57663 58345 1988-1993 0.500000 61.0 accD_p1 accD 1 AGGGGGCAAGAAAACTCT AAATAATGGAACTTGGCGCG 18 20 50.0 45.0 55.5 57.4 0.0 0.0 5.040573 58346 59857 1531-1552 1.000000 44.8 accD_p2 accD 2 AGGGGGCAAGAAAACTCT AAAATAATGGAACTTGGCGCG 18 21 50.0 42.9 55.5 58.1 0.0 0.0 5.605725 58346 59857 1532-1553 1.000000 44.8 accD_p3 accD 3 AGGGGGCAAGAAAACTCT AATAATGGAACTTGGCGCGC 18 20 50.0 50.0 55.5 59.9 0.0 25.9 6.380072 58346 59857 1530-1551 1.000000 44.7 accD_p4 accD 4 AGGGGGCAAGAAAACTCT ATAATGGAACTTGGCGCGC 18 19 50.0 52.6 55.5 59.3 0.0 25.9 6.753108 58346 59857 1529-1550 1.000000 44.7 accD_p5 accD 5 AGGGGGCAAGAAAACTCT TAAAATAATGGAACTTGGCGCG 18 22 50.0 40.9 55.5 58.0 0.0 0.0 6.503039 58346 59857 1533-1554 0.750000 33.0 petB-petD_p1 petB-petD 1 TGCACTTTCCAATGATACGT GTTCAAGTCACACACTCCCA 20 20 40.0 50.0 55.4 57.7 0.0 0.0 2.957644 77249 77434 254-254 1.000000 63.0 petB-petD_p2 petB-petD 2 TGCACTTTCCAATGATACGT AGTTCAAGTCACACACTCCC 20 20 40.0 50.0 55.4 57.4 0.0 0.0 3.254125 77249 77434 255-255 1.000000 60.6 petB-petD_p3 petB-petD 3 ATGCACTTTCCAATGATACGT GTTCAAGTCACACACTCCCA 21 20 38.1 50.0 55.9 57.7 0.0 0.0 3.381568 77249 77434 255-255 1.000000 59.5 petB-petD_p4 petB-petD 4 AATGCACTTTCCAATGATACGT GTTCAAGTCACACACTCCCA 22 20 36.4 50.0 56.7 57.7 0.0 0.0 3.643482 77249 77434 256-256 1.000000 57.4 petB-petD_p5 petB-petD 5 ATGCACTTTCCAATGATACGT AGTTCAAGTCACACACTCCC 21 20 38.1 50.0 55.9 57.4 0.0 0.0 3.678048 77249 77434 256-256 1.000000 57.1 rpl23-trnI-CAU_p1 rpl23-trnI-CAU 1 TCGACCCAATGCTTTAGTTCT GAATGGTTAAAGCGCCCAAC 21 20 42.9 50.0 57.3 58.0 0.0 2.3 1.705031 86826 87019 363-377 1.000000 78.4 rpl23-trnI-CAU_p2 rpl23-trnI-CAU 2 CGACCCAATGCTTTAGTTCTG GAATGGTTAAAGCGCCCAAC 21 20 47.6 50.0 57.3 58.0 0.0 2.3 1.756300 86826 87019 362-376 1.000000 77.9 rpl23-trnI-CAU_p3 rpl23-trnI-CAU 3 TCGACCCAATGCTTTAGTTCT CGCTAAGCATCCCTAAGCAT 21 20 42.9 50.0 57.3 57.8 0.0 0.0 1.871708 86826 87019 391-405 1.000000 77.0 rpl23-trnI-CAU_p4 rpl23-trnI-CAU 4 CGACCCAATGCTTTAGTTCTG CGCTAAGCATCCCTAAGCAT 21 20 47.6 50.0 57.3 57.8 0.0 0.0 1.922977 86826 87019 390-404 1.000000 76.6 rpl23-trnI-CAU_p5 rpl23-trnI-CAU 5 TTCGACCCAATGCTTTAGTTCT GAATGGTTAAAGCGCCCAAC 22 20 40.9 50.0 58.0 58.0 0.0 2.3 2.025073 86826 87019 364-378 1.000000 75.8 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 TTCTACCCTTTCCCGGAAGT GTTGAACCCTGTGAATTGCG 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.084913 87094 87181 746-753 1.000000 89.6 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 TTCTACCCTTTCCCGGAAGT TAGGAAGAAGCCCCCTCAAA 20 20 50.0 50.0 58.0 57.9 0.7 0.0 0.088183 87094 87181 868-875 1.000000 89.2 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 GTTGGGCGCTTTAACCATTC GTTGAACCCTGTGAATTGCG 20 20 50.0 50.0 58.0 57.9 7.6 0.0 0.059678 87094 87181 329-342 1.000000 86.2 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 GTTGGGCGCTTTAACCATTC TAGGAAGAAGCCCCCTCAAA 20 20 50.0 50.0 58.0 57.9 7.6 0.0 0.062948 87094 87181 451-464 1.000000 84.8 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 GTTGGGCGCTTTAACCATTC GGTATAGGAAGAAGCCCCCT 20 20 50.0 55.0 58.0 57.9 7.6 0.0 0.129140 87094 87181 455-468 1.000000 84.2 ycf2_p1 ycf2 1 TTCTACCCTTTCCCGGAAGT CTAGTGGACCTCTCGGTAGG 20 20 50.0 60.0 58.0 58.0 0.7 0.0 0.064345 87183 87432 1478-1485 1.000000 86.3 ycf2_p2 ycf2 2 TTCTACCCTTTCCCGGAAGT GACCTCTCGGTAGGATTCGA 20 20 50.0 55.0 58.0 58.0 0.7 10.5 0.069884 87183 87432 1472-1479 1.000000 86.3 ycf2_p3 ycf2 3 GTTGGGCGCTTTAACCATTC TAGGAAGAAGCCCCCTCAAA 20 20 50.0 50.0 58.0 57.9 7.6 0.0 0.062948 87183 87432 451-464 1.000000 84.8 ycf2_p4 ycf2 4 GTTGGGCGCTTTAACCATTC CTAGTGGACCTCTCGGTAGG 20 20 50.0 60.0 58.0 58.0 7.6 0.0 0.039109 87183 87432 1061-1074 1.000000 82.3 ycf2_p5 ycf2 5 GTTGGGCGCTTTAACCATTC GACCTCTCGGTAGGATTCGA 20 20 50.0 55.0 58.0 58.0 7.6 10.5 0.044648 87183 87432 1055-1068 1.000000 82.3 ndhF-rpl32_p1 ndhF-rpl32 1 GAAAGGCAAAATCCACGCAT TGATGCAGAAGTACGCTTTT 20 20 45.0 40.0 57.6 55.7 0.0 0.0 2.682486 112491 113002 584-589 1.000000 63.0 ndhF-rpl32_p2 ndhF-rpl32 2 GAAAGGCAAAATCCACGCAT TTGATGCAGAAGTACGCTTT 20 20 45.0 40.0 57.6 55.7 0.0 0.0 2.682486 112491 113002 585-590 1.000000 63.0 ndhF-rpl32_p3 ndhF-rpl32 3 GAAAGGCAAAATCCACGCAT TTTGATGCAGAAGTACGCTT 20 20 45.0 40.0 57.6 55.7 0.0 0.0 2.682486 112491 113002 586-591 1.000000 63.0 ndhF-rpl32_p4 ndhF-rpl32 4 GAAAGGCAAAATCCACGCAT TTTTGATGCAGAAGTACGCT 20 20 45.0 40.0 57.6 55.7 0.0 0.0 2.682486 112491 113002 587-592 1.000000 63.0 ndhF-rpl32_p5 ndhF-rpl32 5 AACGAAAGGCAAAATCCACG TGATGCAGAAGTACGCTTTT 20 20 45.0 40.0 57.6 55.7 0.0 0.0 2.729529 112491 113002 587-592 1.000000 62.6 rpl32-trnL_p1 rpl32-trnL 1 TTTTTGTGCGACAAACAAAA TTTAGGAGATGACATGCCGC 20 20 30.0 50.0 53.6 58.0 12.1 0.0 4.432278 113165 113676 632-638 1.000000 49.1 rpl32-trnL_p2 rpl32-trnL 2 TTTTTGTGCGACAAACAAAA TCCTAAGAGCAGCGTGTCTA 20 20 30.0 50.0 53.6 57.9 12.1 0.0 4.510114 113165 113676 577-583 1.000000 48.9 rpl32-trnL_p3 rpl32-trnL 3 TTTTTGTGCGACAAACAAAA AGCAGCGTGTCTACCAATTT 20 20 30.0 45.0 53.6 57.8 12.1 0.0 4.570841 113165 113676 570-576 1.000000 48.5 rpl32-trnL_p4 rpl32-trnL 4 TTTTTGTGCGACAAACAAAA CCTAAGAGCAGCGTGTCTAC 20 20 30.0 55.0 53.6 57.8 12.1 0.0 4.582132 113165 113676 576-582 1.000000 48.3 rpl32-trnL_p5 rpl32-trnL 5 TTTTTGTGCGACAAACAAAA CTAAGAGCAGCGTGTCTACC 20 20 30.0 55.0 53.6 57.8 12.1 0.0 4.582132 113165 113676 575-581 1.000000 48.3 ccsA-ndhD_p1 ccsA-ndhD 1 AATTGTGGCGTCTGTTGGAT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 58.1 57.4 0.0 0.0 0.644670 114825 115056 412-419 1.000000 78.7 ccsA-ndhD_p2 ccsA-ndhD 2 ATTGTGGCGTCTGTTGGATT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 58.1 57.4 0.0 0.0 0.644670 114825 115056 411-418 1.000000 78.7 ccsA-ndhD_p3 ccsA-ndhD 3 TGGCGTCTGTTGGATTTCTT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 57.7 57.4 0.0 0.0 0.824722 114825 115056 407-414 1.000000 77.3 ccsA-ndhD_p4 ccsA-ndhD 4 TTGTGGCGTCTGTTGGATTT ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 58.3 57.4 0.0 0.0 0.868016 114825 115056 410-417 1.000000 76.9 ccsA-ndhD_p5 ccsA-ndhD 5 AATTCAGCAATTGTGGCGTC ACCCCGATTTCGTTCTTTCA 20 20 45.0 45.0 57.6 57.4 7.4 0.0 0.906873 114825 115056 420-427 1.000000 76.5 ycf1_p1 ycf1 1 GTCCAACTCCGAGATGCAAT ACGAGCTCAAAGGCGTAAAA 20 20 50.0 45.0 58.0 58.1 1.3 15.4 0.156140 126152 126271 990-1005 1.000000 88.2 ycf1_p2 ycf1 2 GTCCAACTCCGAGATGCAAT CCGTTCAAGAAAAGGCAAGC 20 20 50.0 50.0 58.0 58.2 1.3 0.0 0.258882 126152 126271 1128-1143 1.000000 86.9 ycf1_p3 ycf1 3 TCAGGGGGTTGTGATAGGAG ACGAGCTCAAAGGCGTAAAA 20 20 55.0 45.0 58.1 58.1 0.0 15.4 0.246727 126152 126271 459-462 1.000000 86.2 ycf1_p4 ycf1 4 GTGCCAAGGTTTCAGACAGA ACGAGCTCAAAGGCGTAAAA 20 20 50.0 45.0 58.0 58.1 0.0 15.4 0.158984 126152 126271 613-616 1.000000 85.8 ycf1_p5 ycf1 5 GTCCAACTCCGAGATGCAAT CGTTCAAGAAAAGGCAAGCC 20 20 50.0 50.0 58.0 58.2 1.3 2.0 0.258882 126152 126271 1142-1142 0.250000 47.9 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 GTTGAACCCTGTGAATTGCG TTCTACCCTTTCCCGGAAGT 20 20 50.0 50.0 57.9 58.0 0.0 0.7 0.084913 150633 150720 731-752 1.000000 91.3 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 TAGGAAGAAGCCCCCTCAAA TTCTACCCTTTCCCGGAAGT 20 20 50.0 50.0 57.9 58.0 0.0 0.7 0.088183 150633 150720 853-874 1.000000 91.3 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 GTTGAACCCTGTGAATTGCG GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 57.9 58.0 0.0 7.6 0.059678 150633 150720 329-342 1.000000 86.2 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 TAGGAAGAAGCCCCCTCAAA GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 57.9 58.0 0.0 7.6 0.062948 150633 150720 451-464 1.000000 84.8 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 GGTATAGGAAGAAGCCCCCT GTTGGGCGCTTTAACCATTC 20 20 55.0 50.0 57.9 58.0 0.0 7.6 0.129140 150633 150720 455-468 1.000000 84.2 trnI-CAU-rpl23_p1 trnI-CAU-rpl23 1 GAATGGTTAAAGCGCCCAAC TTCTACCCTTTCCCGGAAGT 20 20 50.0 50.0 58.0 58.0 2.3 0.7 0.043637 150795 150984 417-430 1.000000 91.7 trnI-CAU-rpl23_p2 trnI-CAU-rpl23 2 GTTGAACCCTGTGAATTGCG TTCTACCCTTTCCCGGAAGT 20 20 50.0 50.0 57.9 58.0 0.0 0.7 0.084913 150795 150984 731-752 1.000000 91.3 trnI-CAU-rpl23_p3 trnI-CAU-rpl23 3 TAGGAAGAAGCCCCCTCAAA TTCTACCCTTTCCCGGAAGT 20 20 50.0 50.0 57.9 58.0 0.0 0.7 0.088183 150795 150984 853-874 1.000000 91.3 trnI-CAU-rpl23_p4 trnI-CAU-rpl23 4 GAATGGTTAAAGCGCCCAAC ACTGTCTACGGTTCCATTGC 20 20 50.0 50.0 58.0 57.9 2.3 0.0 0.103963 150795 150984 596-609 1.000000 91.1 trnI-CAU-rpl23_p5 trnI-CAU-rpl23 5 GAATGGTTAAAGCGCCCAAC GAAGAGTTCGACCCAATGCT 20 20 50.0 50.0 58.0 57.9 2.3 0.0 0.109805 150795 150984 362-375 1.000000 91.1