primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA-rbcL_p1 psbA-rbcL 1 TACAGAAGCGACCCCATAGG ATTTGAGTTTGCCGCAATGG 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.673162 1497 2538 1128-1129 1.000000 77.9 psbA-rbcL_p2 psbA-rbcL 2 TACAGAAGCGACCCCATAGG TGAGTTTGCCGCAATGGATA 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.711287 1497 2538 1125-1126 1.000000 77.6 psbA-rbcL_p3 psbA-rbcL 3 TACAGAAGCGACCCCATAGG GCTGCTTGTGAGGTATGGAA 20 20 55.0 50.0 58.6 57.9 0.0 0.0 0.703856 1497 2538 1157-1158 1.000000 77.5 psbA-rbcL_p4 psbA-rbcL 4 TACAGAAGCGACCCCATAGG AGTTTGCCGCAATGGATACT 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.718766 1497 2538 1123-1124 1.000000 77.5 psbA-rbcL_p5 psbA-rbcL 5 ATCCAGTTACAGAAGCGACC ATTTGAGTTTGCCGCAATGG 20 20 50.0 45.0 57.3 57.9 0.0 6.6 0.757962 1497 2538 1135-1136 1.000000 77.2 ORF192_p1 ORF192 1 AGCGAACATCAATTGCAACG GTCCCGGTAATCGAAGGTTC 20 20 45.0 55.0 58.0 58.1 0.0 0.0 0.100332 11751 12329 1064-1134 1.000000 89.3 ORF192_p2 ORF192 2 GCGAACATCAATTGCAACGA GTCCCGGTAATCGAAGGTTC 20 20 45.0 55.0 58.0 58.1 0.0 0.0 0.105682 11751 12329 1063-1133 1.000000 89.3 ORF192_p3 ORF192 3 AGCGAACATCAATTGCAACG AAGGATTTGGGCAGGTCTTG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.103370 11751 12329 1256-1266 1.000000 88.7 ORF192_p4 ORF192 4 AGCGAACATCAATTGCAACG GCAGGTCTTGACACCAAAGA 20 20 45.0 50.0 58.0 58.0 0.0 3.1 0.064920 11751 12329 1246-1246 0.500000 59.5 ORF192_p5 ORF192 5 GCGAACATCAATTGCAACGA GCAGGTCTTGACACCAAAGA 20 20 45.0 50.0 58.0 58.0 0.0 3.1 0.070270 11751 12329 1245-1245 0.500000 59.4 trnS (GCU)-trnG (UCC)_p1 trnS (GCU)-trnG (UCC) 1 ACGGAAAGAGAGGGATTCGA AGGAGGTTCATAGAACGAATCAC 20 23 50.0 43.5 58.2 58.0 0.0 4.0 3.163677 14018 14756 860-876 1.000000 59.2 trnS (GCU)-trnG (UCC)_p2 trnS (GCU)-trnG (UCC) 2 ACGAAAACGGAAAGAGAGGG AGGAGGTTCATAGAACGAATCAC 20 23 50.0 43.5 57.8 58.0 0.0 4.0 3.177647 14018 14756 866-882 1.000000 59.1 trnS (GCU)-trnG (UCC)_p3 trnS (GCU)-trnG (UCC) 3 ACGGAAAGAGAGGGATTCGA GGAGGTTCATAGAACGAATCACA 20 23 50.0 43.5 58.2 58.2 0.0 4.0 3.395937 14018 14756 859-875 1.000000 57.4 trnS (GCU)-trnG (UCC)_p4 trnS (GCU)-trnG (UCC) 4 ACGAAAACGGAAAGAGAGGG GGAGGTTCATAGAACGAATCACA 20 23 50.0 43.5 57.8 58.2 0.0 4.0 3.409907 14018 14756 865-881 1.000000 57.2 trnS (GCU)-trnG (UCC)_p5 trnS (GCU)-trnG (UCC) 5 AGTCATCGACGAAAACGGAA AGGAGGTTCATAGAACGAATCAC 20 23 45.0 43.5 57.6 58.0 0.0 4.0 3.439560 14018 14756 874-890 1.000000 56.9 rpoB-ORF238_p1 rpoB-ORF238 1 AGTCCCGCGGATACATAGAA CGCGGAAATGTTTTCAGACC 20 20 50.0 50.0 58.0 58.0 30.7 0.0 0.045132 32502 32879 855-855 0.500000 59.6 rpoB-ORF238_p2 rpoB-ORF238 2 ATTGGATCCCCACCTACACA CGCGGAAATGTTTTCAGACC 20 20 50.0 50.0 58.0 58.0 9.9 0.0 0.056444 32502 32879 1311-1311 0.500000 59.5 rpoB-ORF238_p3 rpoB-ORF238 3 AGTCCCGCGGATACATAGAA ACACCAGAACCTGACAAACC 20 20 50.0 50.0 58.0 57.9 30.7 0.0 0.061661 32502 32879 1169-1169 0.500000 59.5 rpoB-ORF238_p4 rpoB-ORF238 4 AGTCCCGCGGATACATAGAA CTACAGGAGGGACACCAGAA 20 20 50.0 55.0 58.0 58.1 30.7 0.0 0.070294 32502 32879 1180-1180 0.500000 59.4 rpoB-ORF238_p5 rpoB-ORF238 5 ATTGGATCCCCACCTACACA ACACCAGAACCTGACAAACC 20 20 50.0 50.0 58.0 57.9 9.9 0.0 0.072973 32502 32879 1625-1625 0.500000 59.4 ORF238_p1 ORF238 1 AGTCCCGCGGATACATAGAA GAAGCCTGTTGAGGAACCAA 20 20 50.0 50.0 58.0 58.0 30.7 0.0 0.027622 32880 33596 2202-2447 1.000000 91.8 ORF238_p2 ORF238 2 AGTCCCGCGGATACATAGAA GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 30.7 0.0 0.027622 32880 33596 2230-2475 1.000000 91.8 ORF238_p3 ORF238 3 ATTGGATCCCCACCTACACA GAAGCCTGTTGAGGAACCAA 20 20 50.0 50.0 58.0 58.0 9.9 0.0 0.038934 32880 33596 2658-2903 1.000000 91.7 ORF238_p4 ORF238 4 ATTGGATCCCCACCTACACA GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 9.9 0.0 0.038934 32880 33596 2686-2931 1.000000 91.7 ORF238_p5 ORF238 5 AGAACCCCACCACATACTCA GAAGCCTGTTGAGGAACCAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057606 32880 33596 2022-2022 0.500000 59.5 ORF238-trnC (GCA)_p1 ORF238-trnC (GCA) 1 GGTCTGAAAACATTTCCGCG GAAGCCTGTTGAGGAACCAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.054997 33597 34450 1612-1612 0.500000 59.6 ORF238-trnC (GCA)_p2 ORF238-trnC (GCA) 2 GGTCTGAAAACATTTCCGCG GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.054997 33597 34450 1640-1640 0.500000 59.6 ORF238-trnC (GCA)_p3 ORF238-trnC (GCA) 3 GGTTTGTCAGGTTCTGGTGT GAAGCCTGTTGAGGAACCAA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.071526 33597 34450 1298-1298 0.500000 59.4 ORF238-trnC (GCA)_p4 ORF238-trnC (GCA) 4 GGTTTGTCAGGTTCTGGTGT GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.071526 33597 34450 1326-1326 0.500000 59.4 ORF238-trnC (GCA)_p5 ORF238-trnC (GCA) 5 TTCTGGTGTCCCTCCTGTAG GAAGCCTGTTGAGGAACCAA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.080159 33597 34450 1287-1287 0.500000 59.4 trnC (GCA)-petN_p1 trnC (GCA)-petN 1 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 34522 34788 341-342 1.000000 80.4 trnC (GCA)-petN_p2 trnC (GCA)-petN 2 GGGGGACTGCAAATCCTTTT CCCAAGCGAGACTTACTAGC 20 20 50.0 55.0 58.4 57.8 14.7 0.0 0.566843 34522 34788 339-340 1.000000 79.9 trnC (GCA)-petN_p3 trnC (GCA)-petN 3 GGGGGACTGCAAATCCTTTT GCCCAAGCGAGACTTACTAG 20 20 50.0 55.0 58.4 57.8 14.7 0.0 0.566843 34522 34788 340-341 1.000000 79.9 trnC (GCA)-petN_p4 trnC (GCA)-petN 4 AGTTCAAATCTGGGTGTCGC AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.5 58.2 0.0 0.0 0.627590 34522 34788 316-317 1.000000 79.8 trnC (GCA)-petN_p5 trnC (GCA)-petN 5 AGTTCAAATCTGGGTGTCGC CCCAAGCGAGACTTACTAGC 20 20 50.0 55.0 58.5 57.8 0.0 0.0 0.687595 34522 34788 314-315 1.000000 79.3 trnT (UGU)-trnL (UAA)_p1 trnT (UGU)-trnL (UAA) 1 GCGATGCTCTACCTTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 52277 52955 725-729 1.000000 83.2 trnT (UGU)-trnL (UAA)_p2 trnT (UGU)-trnL (UAA) 2 GCGATGCTCTACCTTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 52277 52955 733-737 1.000000 82.6 trnT (UGU)-trnL (UAA)_p3 trnT (UGU)-trnL (UAA) 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 52277 52955 757-761 1.000000 82.1 trnT (UGU)-trnL (UAA)_p4 trnT (UGU)-trnL (UAA) 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 52277 52955 765-769 1.000000 81.6 trnT (UGU)-trnL (UAA)_p5 trnT (UGU)-trnL (UAA) 5 GCGATGCTCTACCTTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 52277 52955 739-743 1.000000 81.2 ndhC-ORF224_p1 ndhC-ORF224 1 CTAGAAAGTTTCTCCGGCCC CGGGCAAAGAAGAAATGCAG 20 20 55.0 50.0 58.0 58.0 21.2 0.0 0.038891 56238 56544 515-670 1.000000 84.7 ndhC-ORF224_p2 ndhC-ORF224 2 CTAGAAAGTTTCTCCGGCCC GTCGGGCAAAGAAGAAATGC 20 20 55.0 50.0 58.0 58.0 21.2 0.0 0.042976 56238 56544 517-672 1.000000 84.6 ndhC-ORF224_p3 ndhC-ORF224 3 GTGAGCCGATTAGTGAAGCA CGGGCAAAGAAGAAATGCAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023447 56238 56544 962-1117 1.000000 82.9 ndhC-ORF224_p4 ndhC-ORF224 4 GTGAGCCGATTAGTGAAGCA GTCGGGCAAAGAAGAAATGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.027533 56238 56544 964-1119 1.000000 82.9 ndhC-ORF224_p5 ndhC-ORF224 5 GTGAGCCGATTAGTGAAGCA ACGTCTGAAAAACCCCTCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.046973 56238 56544 1331-1331 0.500000 59.6 ORF224_p1 ORF224 1 CTAGAAAGTTTCTCCGGCCC AGCGTTCTGAAAATCCGTGT 20 20 55.0 45.0 58.0 58.1 21.2 0.0 0.146636 56545 57219 1141-1296 1.000000 84.7 ORF224_p2 ORF224 2 GGGGCTAAAACTCCCGAAAT AGCGTTCTGAAAATCCGTGT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.260370 56545 57219 1111-1266 1.000000 83.9 ORF224_p3 ORF224 3 TCGGAGCTAAGACCATTCCA AGCGTTCTGAAAATCCGTGT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.260406 56545 57219 1382-1537 1.000000 82.8 ORF224_p4 ORF224 4 CTAAAAACCCGCAGCCAAAG AGCGTTCTGAAAATCCGTGT 20 20 50.0 45.0 57.9 58.1 0.0 0.0 0.185620 56545 57219 743-743 0.500000 58.5 ORF224_p5 ORF224 5 CTTCTTTTCATCGCAGTCGC AGCGTTCTGAAAATCCGTGT 20 20 50.0 45.0 57.8 58.1 0.0 0.0 0.271844 56545 57219 945-945 0.500000 57.8 rpoA-rps11_p1 rpoA-rps11 1 CACACTTCCACTGGAGTGTC GCCCCATAATGGCTGTAGAC 20 20 55.0 55.0 58.1 58.1 21.3 0.0 0.231360 77212 77291 175-175 1.000000 80.0 rpoA-rps11_p2 rpoA-rps11 2 CACACTTCCACTGGAGTGTC ACGGGATGTAACTCCTTTGC 20 20 55.0 50.0 58.1 57.9 21.3 0.0 0.238345 77212 77291 193-193 1.000000 79.8 rpoA-rps11_p3 rpoA-rps11 3 CACACTTCCACTGGAGTGTC GGATGTAACTCCTTTGCCCC 20 20 55.0 55.0 58.1 58.2 21.3 0.0 0.364952 77212 77291 190-190 1.000000 78.8 rpoA-rps11_p4 rpoA-rps11 4 CACACTTCCACTGGAGTGTC ACGCAGCATTACGAGCTATT 20 20 55.0 45.0 58.1 57.8 21.3 0.0 0.353988 77212 77291 242-242 1.000000 78.5 rpoA-rps11_p5 rpoA-rps11 5 CACACTTCCACTGGAGTGTC GACGCAGCATTACGAGCTAT 20 20 55.0 50.0 58.1 58.2 21.3 0.0 0.356737 77212 77291 243-243 1.000000 78.5 trnI (CAU)-ycf2_p1 trnI (CAU)-ycf2 1 TGAACCTACGAATTCGCCAA CAGAACCTTACGAAAGATTGCG 20 22 45.0 45.5 57.5 58.0 27.0 0.0 2.467992 84991 85112 265-266 1.000000 61.8 trnI (CAU)-ycf2_p2 trnI (CAU)-ycf2 2 TTGAACCTACGAATTCGCCA CAGAACCTTACGAAAGATTGCG 20 22 45.0 45.5 57.5 58.0 27.0 0.0 2.467992 84991 85112 266-267 1.000000 61.8 trnI (CAU)-ycf2_p3 trnI (CAU)-ycf2 3 TGAACCTACGAATTCGCCAA AGAACCTTACGAAAGATTGCGA 20 22 45.0 40.9 57.5 58.1 27.0 0.0 2.537383 84991 85112 264-265 1.000000 61.2 trnI (CAU)-ycf2_p4 trnI (CAU)-ycf2 4 TTGAACCTACGAATTCGCCA AGAACCTTACGAAAGATTGCGA 20 22 45.0 40.9 57.5 58.1 27.0 0.0 2.537383 84991 85112 265-266 1.000000 61.2 trnI (CAU)-ycf2_p5 trnI (CAU)-ycf2 5 GCCAATTATGAGTTGGGTGC CAGAACCTTACGAAAGATTGCG 20 22 50.0 45.5 57.4 58.0 7.0 0.0 2.593423 84991 85112 250-251 1.000000 60.8 psaC-ndhD_p1 psaC-ndhD 1 GCAGCATGGGTCTAGCTTAT AAGAACCCGCAGTTATTGGT 20 20 50.0 45.0 57.4 57.4 0.0 0.0 1.137329 120423 120534 193-193 1.000000 74.6 psaC-ndhD_p2 psaC-ndhD 2 ATGAAACAACTCGCAGCATG AAGAACCCGCAGTTATTGGT 20 20 45.0 45.0 57.4 57.4 0.0 0.0 1.203726 120423 120534 205-205 1.000000 73.9 psaC-ndhD_p3 psaC-ndhD 3 CATGAAACAACTCGCAGCAT AAGAACCCGCAGTTATTGGT 20 20 45.0 45.0 57.4 57.4 0.0 0.0 1.203726 120423 120534 206-206 1.000000 73.9 psaC-ndhD_p4 psaC-ndhD 4 ATGGCATGAAACAACTCGCA AAGAACCCGCAGTTATTGGT 20 20 45.0 45.0 58.8 57.4 0.0 0.0 1.332761 120423 120534 210-210 1.000000 72.8 psaC-ndhD_p5 psaC-ndhD 5 GCAGCATGGGTCTAGCTTAT AAAGAACCCGCAGTTATTGGT 20 21 50.0 42.9 57.4 58.1 0.0 0.0 1.686467 120423 120534 194-194 1.000000 70.2 trnL (UAG)-rpl32_p1 trnL (UAG)-rpl32 1 AGCGTGTCTACCGATTTCAC GCGGATTCGTTGGACTAGTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.013801 123383 124075 1336-1336 0.500000 59.9 trnL (UAG)-rpl32_p2 trnL (UAG)-rpl32 2 CAGCGTGTCTACCGATTTCA GCGGATTCGTTGGACTAGTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.015171 123383 124075 1337-1337 0.500000 59.9 trnL (UAG)-rpl32_p3 trnL (UAG)-rpl32 3 GGTGTTTTGAAGACGGCATG GCGGATTCGTTGGACTAGTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.056448 123383 124075 1405-1405 0.500000 59.5 trnL (UAG)-rpl32_p4 trnL (UAG)-rpl32 4 AGCGTGTCTACCGATTTCAC CTTTCGACCGGCAAGTCTAA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.082377 123383 124075 776-776 0.500000 59.3 trnL (UAG)-rpl32_p5 trnL (UAG)-rpl32 5 AGCGTGTCTACCGATTTCAC TCGACCGGCAAGTCTAAAAG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.082377 123383 124075 773-773 0.500000 59.3 rpl32-ndhF_p1 rpl32-ndhF 1 GAGCCAATTTTCGCGTCAAA TACATGAAGGGGGAATTGCG 20 20 45.0 50.0 58.0 57.9 5.8 0.0 0.096222 124241 125360 2073-2092 1.000000 82.4 rpl32-ndhF_p2 rpl32-ndhF 2 GAGCCAATTTTCGCGTCAAA AACCAAAATCCCCAACACGA 20 20 45.0 45.0 58.0 57.9 5.8 0.0 0.119617 124241 125360 1894-1913 1.000000 82.3 rpl32-ndhF_p3 rpl32-ndhF 3 GAGCCAATTTTCGCGTCAAA TGTCGCTGACGGAAAAAGAA 20 20 45.0 45.0 58.0 58.1 5.8 4.6 0.102211 124241 125360 1428-1428 0.500000 59.2 rpl32-ndhF_p4 rpl32-ndhF 4 GAGCCAATTTTCGCGTCAAA TTGTCGCTGACGGAAAAAGA 20 20 45.0 45.0 58.0 58.1 5.8 4.6 0.102211 124241 125360 1429-1429 0.500000 59.2 rpl32-ndhF_p5 rpl32-ndhF 5 TTAGACTTGCCGGTCGAAAG TACATGAAGGGGGAATTGCG 20 20 50.0 50.0 57.9 57.9 1.9 0.0 0.125881 124241 125360 1995-1995 0.500000 59.0