Hotspot

trnT-UGU-trnL-UAA

LSC · 46175-47224 · 1050 bp

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Pi 0.0622
MarkerSeek score 87.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1066-1100 bp 1.0 89.7
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 1097-1131 bp 1.0 89.3
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1074-1108 bp 1.0 89.2
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 1105-1139 bp 1.0 88.8
trnT-UGU-trnL-UAA_p5 AAAGCCAACTATCGGAGTCG ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1111-1145 bp 1.0 88.2