Hotspot

ycf1

SSC · 124391-129877 · 5487 bp

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Pi 0.0051
MarkerSeek score 42.60
Primer available yes
Label ycf1

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
ycf1_p1 TCGAATTGAGAGATTAATCGGACA TCTGACTGATAGAACAAGCACA 37.5 40.9 57.9 57.1 189 bp 1.0 42.1
ycf1_p2 TCGAATTGAGAGATTAATCGGACA GACGGATCTGACTGATAGAACA 37.5 45.5 57.9 57.1 195 bp 1.0 42.1
ycf1_p3 TCGAATTGAGAGATTAATCGGACA GGATCTGACTGATAGAACAAGCA 37.5 43.5 57.9 58.0 192 bp 1.0 42.1
ycf1_p4 TCGAATTGAGAGATTAATCGGACA ACGGATCTGACTGATAGAACA 37.5 42.9 57.9 55.9 194 bp 1.0 42.1
ycf1_p5 TCGAATTGAGAGATTAATCGGACA AGACGGATCTGACTGATAGAAC 37.5 45.5 57.9 56.8 196 bp 1.0 42.0