primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16_p1 rps16 1 AGAGCAAAAAGGGTGGGAAT ACGTACCGACTAAACCAATGA 20 21 45.0 42.9 57.3 57.1 0.0 0.0 2.642479 5266 6398 1306-1307 1.000000 58.9 rps16_p2 rps16 2 AGAGCAAAAAGGGTGGGAAT TGTACGTACCGACTAAACCA 20 20 45.0 45.0 57.3 56.0 0.0 22.4 2.742586 5266 6398 1309-1310 1.000000 58.1 rps16_p3 rps16 3 AGAGCAAAAAGGGTGGGAAT CGTACCGACTAAACCAATGACT 20 22 45.0 45.5 57.3 58.2 0.0 0.0 2.860627 5266 6398 1305-1306 1.000000 57.2 rps16_p4 rps16 4 AGAGCAAAAAGGGTGGGAAT CGTACCGACTAAACCAATGAC 20 21 45.0 47.6 57.3 56.7 0.0 0.0 2.955223 5266 6398 1305-1306 1.000000 56.4 rps16_p5 rps16 5 AGAGCAAAAAGGGTGGGAAT TGTACGTACCGACTAAACCAA 20 21 45.0 42.9 57.3 56.7 0.0 22.4 2.976303 5266 6398 1309-1310 1.000000 56.3 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6399 7858 1532-1533 1.000000 78.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCCACATCAGATCGTGTCCT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.1 58.1 10.3 16.9 0.223468 6399 7858 1554-1555 1.000000 78.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.4 58.1 0.0 16.9 0.714657 6399 7858 1546-1547 1.000000 74.3 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CCACATCAGATCGTGTCCTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.3 58.1 10.3 16.9 0.756413 6399 7858 1553-1554 1.000000 74.0 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6399 7858 1536-1537 1.000000 73.6 trnG-UCC_p1 trnG-UCC 1 CGTTGTTCGACAAAAGTTCCA ATGGACGCTTCTCATTACGA 21 20 42.9 45.0 57.6 56.8 2.7 0.0 2.641272 10342 11139 962-962 1.000000 59.0 trnG-UCC_p2 trnG-UCC 2 CGTTGTTCGACAAAAGTTCCA TGGACGCTTCTCATTACGAT 21 20 42.9 45.0 57.6 56.8 2.7 0.0 2.641272 10342 11139 961-961 1.000000 59.0 trnG-UCC_p3 trnG-UCC 3 TCGTTGTTCGACAAAAGTTCC ATGGACGCTTCTCATTACGA 21 20 42.9 45.0 57.3 56.8 2.7 0.0 2.910261 10342 11139 963-963 1.000000 56.8 trnG-UCC_p4 trnG-UCC 4 TCGTTGTTCGACAAAAGTTCC TGGACGCTTCTCATTACGAT 21 20 42.9 45.0 57.3 56.8 2.7 0.0 2.910261 10342 11139 962-962 1.000000 56.8 trnG-UCC_p5 trnG-UCC 5 CGTTGTTCGACAAAAGTTCCA TGGACGCTTCTCATTACGATT 21 21 42.9 42.9 57.6 57.5 2.7 0.0 2.913059 10342 11139 961-961 1.000000 56.8 atpF_p1 atpF 1 TTCATCAGCTCGAAGGGTTG AGTTTTTGAATCCATTTTCGA 20 21 50.0 28.6 57.9 52.2 0.0 0.0 6.879158 13104 14414 1513-1513 1.000000 40.1 atpF_p2 atpF 2 TTCATCAGCTCGAAGGGTTG AGGAAATAGGTCAAGTAATACAACA 20 25 50.0 32.0 57.9 56.0 0.0 0.0 7.128303 13104 14414 1483-1483 1.000000 40.1 atpF_p3 atpF 3 TTCATCAGCTCGAAGGGTTG AGTTTTTGAATCCATTTTCGAT 20 22 50.0 27.3 57.9 52.9 0.0 0.0 7.194864 13104 14414 1513-1513 1.000000 40.1 atpF_p4 atpF 4 TTCATCAGCTCGAAGGGTTG AGTTTTTGAATCCATTTTCGATT 20 23 50.0 26.1 57.9 53.7 0.0 0.0 7.353388 13104 14414 1513-1513 1.000000 40.1 atpF_p5 atpF 5 GCTCGAAGGGTTGTCATGAG AGTTTTTGAATCCATTTTCGA 20 21 55.0 28.6 58.6 52.2 0.0 0.0 7.416273 13104 14414 1506-1506 1.000000 40.1 rpoC2_p1 rpoC2 1 GGATGGTGCCACAATCTCTT CAGGAGCTAGAGGAAATGCC 20 20 50.0 55.0 57.9 57.7 11.9 0.0 0.387765 21131 21250 270-270 1.000000 77.2 rpoC2_p2 rpoC2 2 GGATGGTGCCACAATCTCTT AATGCCTCTCAGGTACACCA 20 20 50.0 50.0 57.9 58.3 11.9 0.4 0.478202 21131 21250 256-256 1.000000 76.5 rpoC2_p3 rpoC2 3 GGATGGTGCCACAATCTCTT ATGCCTCTCAGGTACACCAA 20 20 50.0 50.0 57.9 58.3 11.9 0.4 0.478202 21131 21250 255-255 1.000000 76.5 rpoC2_p4 rpoC2 4 GGATGGTGCCACAATCTCTT TGCCTCTCAGGTACACCAAT 20 20 50.0 50.0 57.9 58.3 11.9 0.4 0.478202 21131 21250 254-254 1.000000 76.5 rpoC2_p5 rpoC2 5 GGTTTGGGGACTCACAGAAA CAGGAGCTAGAGGAAATGCC 20 20 50.0 55.0 57.6 57.7 0.0 0.0 0.611298 21131 21250 296-296 1.000000 75.4 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 33217 34130 1017-1017 1.000000 77.9 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 33217 34130 996-996 1.000000 77.8 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCTGCCTCCTTGAAAGAGAG CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 58.3 58.1 0.0 0.0 0.327456 33217 34130 996-996 1.000000 77.5 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.7 58.1 0.0 0.0 0.345606 33217 34130 975-975 1.000000 77.3 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 58.3 58.1 0.0 0.0 0.349611 33217 34130 993-993 1.000000 77.3 trnV-UAC-trnM-CAU_p1 trnV-UAC-trnM-CAU 1 CCTTGAAAAACATTGGCGCA TTGAACCAATGACTCCTGCC 20 20 45.0 50.0 58.1 58.1 10.8 0.0 0.227033 55181 55356 293-293 1.000000 78.5 trnV-UAC-trnM-CAU_p2 trnV-UAC-trnM-CAU 2 ACCAACTGAGCTATAGCCCT TTGAACCAATGACTCCTGCC 20 20 50.0 50.0 57.8 58.1 21.2 0.0 0.272816 55181 55356 254-254 1.000000 78.1 trnV-UAC-trnM-CAU_p3 trnV-UAC-trnM-CAU 3 CCTTGAAAAACATTGGCGCA CTCCTGCCGTATGAAAGCAA 20 20 45.0 50.0 58.1 58.3 10.8 0.0 0.398895 55181 55356 281-281 1.000000 77.1 trnV-UAC-trnM-CAU_p4 trnV-UAC-trnM-CAU 4 ACCAACTGAGCTATAGCCCT CTCCTGCCGTATGAAAGCAA 20 20 50.0 50.0 57.8 58.3 21.2 0.0 0.444678 55181 55356 242-242 1.000000 76.8 trnV-UAC-trnM-CAU_p5 trnV-UAC-trnM-CAU 5 CCTTGAAAAACATTGGCGCA CCAATGACTCCTGCCGTATG 20 20 45.0 55.0 58.1 58.4 10.8 0.0 0.550311 55181 55356 288-288 1.000000 75.9 rbcL_p1 rbcL 1 ACGCCTAATTCATGTCGAGT AGTAAAAGATTGAGCCGAGT 20 20 45.0 40.0 57.0 54.4 0.0 0.0 4.570755 58411 59859 1553-1553 1.000000 43.4 rbcL_p2 rbcL 2 ACGCCTAATTCATGTCGAGT AGTAAAAGATTGAGCCGAGTT 20 21 45.0 38.1 57.0 55.2 0.0 0.0 4.721730 58411 59859 1553-1553 1.000000 42.2 rbcL_p3 rbcL 3 AACGCCTAATTCATGTCGAGT AGTAAAAGATTGAGCCGAGT 21 20 42.9 40.0 57.8 54.4 0.0 0.0 4.856235 58411 59859 1554-1554 1.000000 41.2 rbcL_p4 rbcL 4 ACGCCTAATTCATGTCGAGT AGTAAAAGATTGAGCCGAGTTT 20 22 45.0 36.4 57.0 56.0 0.0 0.0 4.949371 58411 59859 1553-1553 1.000000 40.4 rbcL_p5 rbcL 5 AACGCCTAATTCATGTCGAGT AGTAAAAGATTGAGCCGAGTT 21 21 42.9 38.1 57.8 55.2 0.0 0.0 5.007209 58411 59859 1554-1554 1.000000 40.0 rbcL-accD_p1 rbcL-accD 1 AATGGAGTCCTGAGCTAGCT TAGCCCACACCTATGTTCGA 20 20 50.0 50.0 57.8 58.1 19.4 0.0 0.317831 59860 60344 628-628 1.000000 77.8 rbcL-accD_p2 rbcL-accD 2 TCGTAAAGCTGCCAAATGGA TAGCCCACACCTATGTTCGA 20 20 45.0 50.0 57.8 58.1 3.0 0.0 0.337368 59860 60344 642-642 1.000000 77.7 rbcL-accD_p3 rbcL-accD 3 CTGCCAAATGGAGTCCTGAG TAGCCCACACCTATGTTCGA 20 20 55.0 50.0 58.3 58.1 11.3 0.0 0.396996 59860 60344 634-634 1.000000 77.2 rbcL-accD_p4 rbcL-accD 4 CGTAAAGCTGCCAAATGGAG TAGCCCACACCTATGTTCGA 20 20 50.0 50.0 57.5 58.1 3.0 0.0 0.694338 59860 60344 641-641 1.000000 74.8 rbcL-accD_p5 rbcL-accD 5 GCCGCTTGTGAAGTATGGAA TAGCCCACACCTATGTTCGA 20 20 50.0 50.0 58.6 58.1 0.0 0.0 0.695720 59860 60344 608-608 1.000000 74.8 trnW-CCA_p1 trnW-CCA 1 TGACCTCCTGTGGCTTAAAG ATGTGATATGCATGCAGGAT 20 20 50.0 40.0 57.1 54.9 0.0 26.7 3.936388 69844 69917 240-240 1.000000 48.8 trnW-CCA_p2 trnW-CCA 2 TGACCTCCTGTGGCTTAAAG GCATGCAGGATATAGTATTGGGT 20 23 50.0 43.5 57.1 58.2 0.0 14.2 4.010808 69844 69917 231-231 1.000000 48.3 trnW-CCA_p3 trnW-CCA 3 TGACCTCCTGTGGCTTAAAG TGCATGCAGGATATAGTATTGGG 20 23 50.0 43.5 57.1 58.2 0.0 18.5 4.011967 69844 69917 232-232 1.000000 48.2 trnW-CCA_p4 trnW-CCA 4 TTGACCTCCTGTGGCTTAAAG ATGTGATATGCATGCAGGAT 21 20 47.6 40.0 57.9 54.9 0.0 26.7 4.217548 69844 69917 241-241 1.000000 46.6 trnW-CCA_p5 trnW-CCA 5 GACCTCCTGTGGCTTAAAGA ATGTGATATGCATGCAGGAT 20 20 50.0 40.0 56.8 54.9 0.0 26.7 4.229356 69844 69917 239-239 1.000000 46.5 ycf1_p1 ycf1 1 ACTGGTTCTATGCGTGTTCA CCGCCCCTTTTCCATTTCAT 20 20 45.0 50.0 57.2 58.8 0.0 0.0 1.637467 115765 115884 297-297 1.000000 67.7 ycf1_p2 ycf1 2 TCACTGGTTCTATGCGTGTT CCGCCCCTTTTCCATTTCAT 20 20 45.0 50.0 57.2 58.8 0.0 0.0 1.637467 115765 115884 299-299 1.000000 67.7 ycf1_p3 ycf1 3 ACTGGTTCTATGCGTGTTCA TTCGTTCCATTTCCGTCTGC 20 20 45.0 50.0 57.2 58.8 0.0 0.0 1.678332 115765 115884 322-322 1.000000 67.3 ycf1_p4 ycf1 4 TCACTGGTTCTATGCGTGTT TTCGTTCCATTTCCGTCTGC 20 20 45.0 50.0 57.2 58.8 0.0 0.0 1.678332 115765 115884 324-324 1.000000 67.3 ycf1_p5 ycf1 5 TCTATGCGTGTTCAAAGACGT CCGCCCCTTTTCCATTTCAT 21 20 42.9 50.0 58.0 58.8 13.0 0.0 1.827051 115765 115884 291-291 1.000000 66.2 ndhF-rpl32_p1 ndhF-rpl32 1 AGAAGAAGTCCTGCTCCGAT TGCTGCCCAATATCCTTTTCT 20 21 50.0 42.9 58.1 57.6 0.0 0.0 1.527630 121408 122481 1241-1241 1.000000 67.8 ndhF-rpl32_p2 ndhF-rpl32 2 AGAAGAAGTCCTGCTCCGAT GCAAAAGCTTTTAATGCTGCC 20 21 50.0 42.9 58.1 57.5 0.0 23.4 1.601060 121408 122481 1255-1255 1.000000 67.3 ndhF-rpl32_p3 ndhF-rpl32 3 AGAAGAAGTCCTGCTCCGAT AAAGCTTTTAATGCTGCCCA 20 20 50.0 40.0 58.1 56.5 0.0 5.7 1.660540 121408 122481 1252-1252 1.000000 66.8 ndhF-rpl32_p4 ndhF-rpl32 4 AGAAGAAGTCCTGCTCCGAT AAGCTTTTAATGCTGCCCAA 20 20 50.0 40.0 58.1 56.5 0.0 6.1 1.660540 121408 122481 1251-1251 1.000000 66.8 ndhF-rpl32_p5 ndhF-rpl32 5 AAGAAGAAGTCCTGCTCCGA TGCTGCCCAATATCCTTTTCT 20 21 50.0 42.9 58.4 57.6 0.0 0.0 1.753159 121408 122481 1242-1242 1.000000 66.0 ccsA_p1 ccsA 1 ACGATTTGTAATTGAGGGATCTCT GTTCTCGACGAGACTTGCTT 24 20 37.5 50.0 57.8 57.9 0.0 26.5 4.293831 123623 124588 1116-1116 1.000000 45.6 ccsA_p2 ccsA 2 ACGATTTGTAATTGAGGGATCTCT ACCCCGTCCTGTAGTTGTAT 24 20 37.5 50.0 57.8 57.8 0.0 0.0 4.483431 123623 124588 1066-1066 1.000000 44.1 ccsA_p3 ccsA 3 ACGATTTGTAATTGAGGGATCTCT ATACCCCGTCCTGTAGTTGT 24 20 37.5 50.0 57.8 57.8 0.0 0.0 4.483431 123623 124588 1068-1068 1.000000 44.1 ccsA_p4 ccsA 4 ACGATTTGTAATTGAGGGATCTC GTTCTCGACGAGACTTGCTT 23 20 39.1 50.0 56.4 57.9 0.0 26.5 4.638276 123623 124588 1116-1116 1.000000 42.9 ccsA_p5 ccsA 5 ACGATTTGTAATTGAGGGATCT GTTCTCGACGAGACTTGCTT 22 20 36.4 50.0 55.2 57.9 0.0 26.5 4.815923 123623 124588 1116-1116 1.000000 41.5 ccsA-ndhD_p1 ccsA-ndhD 1 TCTGCAATTGTGGCTTCTCT TGGCATTTACCCAGATTTCGT 20 21 45.0 42.9 57.4 57.9 7.4 0.0 1.654305 124589 124807 412-412 1.000000 68.7 ccsA-ndhD_p2 ccsA-ndhD 2 TCTGCAATTGTGGCTTCTCT ACCCAGATTTCGTTCTCTCAC 20 21 45.0 47.6 57.4 57.7 7.4 0.0 1.894679 124589 124807 404-404 1.000000 66.8 ccsA-ndhD_p3 ccsA-ndhD 3 GCAATTGTGGCTTCTCTAGGA TGGCATTTACCCAGATTTCGT 21 21 47.6 42.9 58.0 57.9 7.4 0.0 2.089049 124589 124807 409-409 1.000000 65.2 ccsA-ndhD_p4 ccsA-ndhD 4 TCTGCAATTGTGGCTTCTCT CCCAGATTTCGTTCTCTCACT 20 21 45.0 47.6 57.4 57.4 7.4 0.0 2.175448 124589 124807 403-403 1.000000 64.6 ccsA-ndhD_p5 ccsA-ndhD 5 TTCTGCAATTGTGGCTTCTCT TGGCATTTACCCAGATTTCGT 21 21 42.9 42.9 58.1 57.9 7.4 0.0 2.212676 124589 124807 413-413 1.000000 64.2 ndhD_p1 ndhD 1 ACAAACGTCAAACTGTCCGA GTTTACCGACAAAAACCCGC 20 20 45.0 50.0 58.0 58.2 0.0 0.0 0.255363 124808 126385 1685-1685 1.000000 78.0 ndhD_p2 ndhD 2 CACAAACGTCAAACTGTCCG GTTTACCGACAAAAACCCGC 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.327958 124808 126385 1686-1686 1.000000 77.4 ndhD_p3 ndhD 3 ACAAACGTCAAACTGTCCGA ATGGCATGAAACAACTCGCA 20 20 45.0 45.0 58.0 58.8 0.0 0.0 0.766288 124808 126385 1761-1761 1.000000 73.9 ndhD_p4 ndhD 4 CACAAACGTCAAACTGTCCG ATGGCATGAAACAACTCGCA 20 20 50.0 45.0 57.9 58.8 0.0 0.0 0.838883 124808 126385 1762-1762 1.000000 73.3 ndhD_p5 ndhD 5 ACAAACGTCAAACTGTCCGA ACGTTCCAGAAAACTCCACT 20 20 45.0 45.0 58.0 57.0 0.0 0.0 1.015393 124808 126385 1720-1720 1.000000 71.9 rps15_p1 rps15 1 GCCAGTGACAGCTTCGAATA TGGATAAATAGCTGCGCACA 20 20 50.0 45.0 58.0 57.7 0.0 5.7 0.334113 132480 132743 1070-1157 1.000000 82.4 rps15_p2 rps15 2 GCCAGTGACAGCTTCGAATA GGTGGATAAATAGCTGCGCA 20 20 50.0 50.0 58.0 58.4 0.0 11.0 0.416949 132480 132743 1072-1159 1.000000 81.7 rps15_p3 rps15 3 TAAGGTAAATCGGCAGCGAC TGGATAAATAGCTGCGCACA 20 20 50.0 45.0 58.1 57.7 0.0 5.7 0.393401 132480 132743 1126-1213 1.000000 81.6 rps15_p4 rps15 4 TCTTCTCCGCCAATAATGCC TGGATAAATAGCTGCGCACA 20 20 50.0 45.0 58.0 57.7 0.0 5.7 0.356650 132480 132743 1258-1345 1.000000 81.4 rps15_p5 rps15 5 TTTATTGCCTCTTCTCCGCC TGGATAAATAGCTGCGCACA 20 20 50.0 45.0 58.0 57.7 0.0 5.7 0.362355 132480 132743 1267-1354 1.000000 81.4 rps15-ycf1_p1 rps15-ycf1 1 AAGTCGTTGACGTTTTCCCA GGATCCAATGCTAATCCGGG 20 20 45.0 55.0 58.0 58.2 3.2 7.0 0.200618 132744 133035 1058-1145 1.000000 83.5 rps15-ycf1_p2 rps15-ycf1 2 AGTCGTTGACGTTTTCCCAA GGATCCAATGCTAATCCGGG 20 20 45.0 55.0 58.0 58.2 3.2 7.0 0.200618 132744 133035 1057-1144 1.000000 83.5 rps15-ycf1_p3 rps15-ycf1 3 AAGTCGTTGACGTTTTCCCA GATTATGCGCTGTCCGTACT 20 20 45.0 50.0 58.0 57.9 3.2 9.7 0.162668 132744 133035 1150-1237 1.000000 83.4 rps15-ycf1_p4 rps15-ycf1 4 AGTCGTTGACGTTTTCCCAA GATTATGCGCTGTCCGTACT 20 20 45.0 50.0 58.0 57.9 3.2 9.7 0.162668 132744 133035 1149-1236 1.000000 83.4 rps15-ycf1_p5 rps15-ycf1 5 TAAGCCAGAAGTCGTTGACG GATTATGCGCTGTCCGTACT 20 20 50.0 50.0 57.9 57.9 0.0 9.7 0.195990 132744 133035 1158-1245 1.000000 83.1