primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 CAATCCACTGCCTTGATCCA AACCGTGCAAACCTTGGTAT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.143575 102 293 327-330 1.000000 86.9 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATCCACTGCCTTGATCCAC AACCGTGCAAACCTTGGTAT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.145083 102 293 326-329 1.000000 86.8 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACAATCCACTGCCTTGATCC AACCGTGCAAACCTTGGTAT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.145083 102 293 328-331 1.000000 86.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 CTTGATCCACTTGGCCACAT AACCGTGCAAACCTTGGTAT 20 20 50.0 45.0 58.2 58.0 3.9 0.0 0.166925 102 293 316-319 1.000000 86.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 CAATCCACTGCCTTGATCCA GCGTAATGCACACAACTTCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.169535 102 293 292-295 1.000000 86.6 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT GGTGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.2 58.2 20.3 1.3 0.358736 4294 5289 1139-1182 1.000000 85.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GGTGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.2 58.2 20.3 1.3 0.358736 4294 5289 1138-1181 1.000000 85.0 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TACCGTTGAGTTAGCAACCC GGTGCTCAACCTACAGGAAC 20 20 50.0 55.0 57.5 58.2 0.0 1.3 0.651073 4294 5289 1125-1168 1.000000 82.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AGTCGCACTTAAAAGCCGAG GGTGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.6 58.2 6.4 1.3 0.760853 4294 5289 1150-1193 1.000000 81.7 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCGCACTTAAAAGCCGAGTA GGTGCTCAACCTACAGGAAC 20 20 45.0 55.0 57.3 58.2 3.0 1.3 0.919006 4294 5289 1148-1191 1.000000 80.5 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6391 7344 1023-1318 1.000000 85.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TGATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 6391 7344 1034-1329 1.000000 84.7 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA CTCGGAGGTTCGAATCCTTC 20 20 45.0 55.0 58.1 57.8 8.1 16.9 0.350677 6391 7344 1027-1322 1.000000 84.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 TGATGTCCTTCAAGTCGCAC CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 0.0 16.9 0.415585 6391 7344 1038-1333 1.000000 83.6 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA ACATATAAATGGGGCGTGGC 20 20 45.0 50.0 58.1 58.4 8.1 0.0 0.523165 6391 7344 1080-1375 1.000000 82.5 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GAAGGATTCGAACCTCCGAG ACTCGAATGAAGGGCAGAAC 20 20 55.0 50.0 57.8 57.9 16.4 0.0 0.311957 7418 7741 439-439 1.000000 82.2 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GAAGGATTCGAACCTCCGAG AAGCTACTCGAATGAAGGGC 20 20 55.0 50.0 57.8 57.7 16.4 0.0 0.528882 7418 7741 444-444 1.000000 80.5 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 AGGATTCGAACCTCCGAGTA ACTCGAATGAAGGGCAGAAC 20 20 50.0 50.0 57.6 57.9 11.3 0.0 0.532558 7418 7741 437-437 1.000000 80.5 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 AAGGATTCGAACCTCCGAGT ACTCGAATGAAGGGCAGAAC 20 20 50.0 50.0 58.4 57.9 16.4 0.0 0.542372 7418 7741 438-438 1.000000 80.4 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 GAGTAACGGGACCAAAACCC ACTCGAATGAAGGGCAGAAC 20 20 55.0 50.0 58.5 57.9 0.0 0.0 0.573570 7418 7741 422-422 1.000000 80.3 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGAATGAATAGCACAGTAGCA AGTTCAATCGGTCAGAGCAC 21 20 38.1 50.0 54.7 57.9 0.0 0.0 4.347921 30517 31537 1134-1178 1.000000 52.5 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGAATGAATAGCACAGTAGCAA AGTTCAATCGGTCAGAGCAC 22 20 36.4 50.0 55.5 57.9 0.0 0.0 4.550235 30517 31537 1134-1178 1.000000 50.9 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 ACTAGAATGAATAGCACAGTAGCA AGTTCAATCGGTCAGAGCAC 24 20 37.5 50.0 57.5 57.9 0.0 0.0 4.557288 30517 31537 1137-1181 1.000000 50.8 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGGAACTAGAATGAATAGCACAGT AGTTCAATCGGTCAGAGCAC 24 20 37.5 50.0 57.4 57.9 0.0 0.0 4.638499 30517 31537 1141-1185 1.000000 50.1 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AGAATGAATAGCACAGTAGCA CCGGGATTCTGGGATTGTAG 21 20 38.1 55.0 54.7 57.4 0.0 0.0 4.812697 30517 31537 1152-1196 1.000000 48.7 trnY-GUA-trnE-UUC_p1 trnY-GUA-trnE-UUC 1 TGGGAATGGCGAATTAGTGG CTCTCTTTCAAGGAGGCAGC 20 20 50.0 55.0 57.9 58.3 0.0 0.0 0.314723 32020 32078 205-205 1.000000 80.6 trnY-GUA-trnE-UUC_p2 trnY-GUA-trnE-UUC 2 TGGGAATGGCGAATTAGTGG CCCCTATCGTCTAGTGGTCA 20 20 50.0 55.0 57.9 57.6 0.0 0.0 0.411316 32020 32078 231-231 1.000000 79.5 trnY-GUA-trnE-UUC_p3 trnY-GUA-trnE-UUC 3 TGGGAATGGCGAATTAGTGG ATGCCCCTATCGTCTAGTGG 20 20 50.0 55.0 57.9 58.4 0.0 0.0 0.417561 32020 32078 234-234 1.000000 79.4 trnY-GUA-trnE-UUC_p4 trnY-GUA-trnE-UUC 4 TGGGAATGGCGAATTAGTGG TCGTCTAGTGGTCAGGACAT 20 20 50.0 50.0 57.9 57.5 0.0 1.4 0.560501 32020 32078 225-225 1.000000 78.4 trnY-GUA-trnE-UUC_p5 trnY-GUA-trnE-UUC 5 TGGGAATGGCGAATTAGTGG ATCGTCTAGTGGTCAGGACA 20 20 50.0 50.0 57.9 57.5 0.0 1.4 0.560501 32020 32078 226-226 1.000000 78.3 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 AGTGGGTATCCTTAATTCTCTCA AATCGAACCCGCATCTTCTC 23 20 39.1 50.0 56.2 58.1 0.0 0.0 4.887854 37804 38091 377-379 1.000000 47.9 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 AGTGGGTATCCTTAATTCTCTCA GAATCGAACCCGCATCTTCT 23 20 39.1 50.0 56.2 58.1 0.0 0.0 4.887854 37804 38091 378-380 1.000000 47.8 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 GTGGGTATCCTTAATTCTCTCA AATCGAACCCGCATCTTCTC 22 20 40.9 50.0 54.7 58.1 0.0 0.0 5.360994 37804 38091 376-378 1.000000 47.0 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 TGGATTAGTTTTTCTAGTGGGT AATCGAACCCGCATCTTCTC 22 20 36.4 50.0 54.7 58.1 0.0 0.0 5.347973 37804 38091 392-394 1.000000 46.7 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 TGGATTAGTTTTTCTAGTGGGT GAATCGAACCCGCATCTTCT 22 20 36.4 50.0 54.7 58.1 0.0 0.0 5.347973 37804 38091 393-395 1.000000 46.7 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 48150 48955 856-906 1.000000 83.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 48150 48955 864-914 1.000000 83.0 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 ACAAATAGAACAAGCCGGCT ACCAATTTCGCCATATCCCC 20 20 45.0 50.0 57.8 58.0 27.1 0.0 0.204996 48150 48955 911-961 1.000000 82.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 48150 48955 888-938 1.000000 82.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 ACAAATAGAACAAGCCGGCT TAGCGTCTACCAATTTCGCC 20 20 45.0 50.0 57.8 58.1 27.1 0.0 0.269805 48150 48955 919-969 1.000000 82.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAAATAGGAATAACACTTGA AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 56.8 57.8 0.0 0.0 5.352136 52385 53729 1449-1594 1.000000 46.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAAATAGGAATAACACTTGA GAAGGTCTACGGTTCGAGTC 24 20 33.3 55.0 56.8 57.5 0.0 0.0 5.695908 52385 53729 1448-1593 1.000000 46.1 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCAAAATAGGAATAACACTTGA GAGCCCAATGCAAAGCAAAA 24 20 33.3 45.0 56.8 58.1 0.0 0.0 5.273262 52385 53729 1537-1685 1.000000 45.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAAATAGGAATAACACTTGA AGCCCAATGCAAAGCAAAAA 24 20 33.3 40.0 56.8 57.7 0.0 0.0 5.499977 52385 53729 1536-1684 1.000000 45.8 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAAATAGGAATAACACTTG GAGCCCAATGCAAAGCAAAA 23 20 34.8 45.0 55.5 58.1 0.0 0.0 5.653014 52385 53729 1537-1685 1.000000 45.8 petA-psbJ_p1 petA-psbJ 1 TACGGGTCCAAGGTTTGTTG ATTCTGGATTGGGCTCATCC 20 20 50.0 50.0 58.0 57.3 0.0 7.8 0.701804 66006 66865 993-1005 1.000000 80.1 petA-psbJ_p2 petA-psbJ 2 GCATCTGTTACTCTGGCACA ATTCTGGATTGGGCTCATCC 20 20 50.0 50.0 57.9 57.3 0.0 7.8 0.771037 66006 66865 964-976 1.000000 79.7 petA-psbJ_p3 petA-psbJ 3 TTGGCATCTGTTACTCTGGC ATTCTGGATTGGGCTCATCC 20 20 50.0 50.0 57.9 57.3 0.0 7.8 0.785756 66006 66865 967-979 1.000000 79.5 petA-psbJ_p4 petA-psbJ 4 CCATTACGGGTCCAAGGTTT ATTCTGGATTGGGCTCATCC 20 20 50.0 50.0 57.8 57.3 0.0 7.8 0.881586 66006 66865 997-1009 1.000000 78.6 petA-psbJ_p5 petA-psbJ 5 GATCCATTACGGGTCCAAGG ATTCTGGATTGGGCTCATCC 20 20 55.0 50.0 57.7 57.3 0.0 7.8 0.928013 66006 66865 1000-1012 1.000000 78.2 trnN-GUU-rps15_p1 trnN-GUU-rps15 1 AGTAGTACCGACGACTATGCA CTTGTCCCTGCCCTTCTTTT 21 20 47.6 50.0 58.1 58.0 0.0 0.0 1.090876 117114 117233 1351-1351 0.285714 42.9 trnN-GUU-rps15_p2 trnN-GUU-rps15 2 AGTAGTACCGACGACTATGCA TGTCCCTGCCCTTCTTTTTC 21 20 47.6 50.0 58.1 58.0 0.0 0.0 1.094424 117114 117233 1349-1349 0.285714 42.9 trnN-GUU-rps15_p3 trnN-GUU-rps15 3 AGTAGTACCGACGACTATGCA GGAAAGAACCAAGGCTCGAT 21 20 47.6 50.0 58.1 57.9 0.0 0.0 1.205143 117114 117233 1145-1145 0.285714 42.1 trnN-GUU-rps15_p4 trnN-GUU-rps15 4 AGTAGTACCGACGACTATGCA GTCTTGACTAAAGGGCCTGG 21 20 47.6 55.0 58.1 57.9 0.0 6.9 1.205143 117114 117233 972-972 0.285714 42.1 trnN-GUU-rps15_p5 trnN-GUU-rps15 5 AGTAGTACCGACGACTATGCA GAACCAAGGCTCGATACTCG 21 20 47.6 55.0 58.1 58.2 0.0 0.0 1.248351 117114 117233 1140-1140 0.285714 41.7 ndhG-ndhE_p1 ndhG-ndhE 1 TGGGGATGGGGTTACTTCAT ACATCCGTCCCAAGGTATCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.131472 124334 124564 1190-1213 1.000000 83.3 ndhG-ndhE_p2 ndhG-ndhE 2 TGGGGATGGGGTTACTTCAT ATCATTTCCAACACGTCCGT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.184513 124334 124564 1174-1197 1.000000 82.9 ndhG-ndhE_p3 ndhG-ndhE 3 TGGGGATGGGGTTACTTCAT CGAGTTTTTGGGCGTTTTCA 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.201896 124334 124564 1079-1080 0.285714 49.9 ndhG-ndhE_p4 ndhG-ndhE 4 CTGCATGAATTCGCATTGCA ACATCCGTCCCAAGGTATCA 20 20 45.0 50.0 58.1 58.1 18.2 0.0 0.209918 124334 124564 1617-1618 0.285714 49.8 ndhG-ndhE_p5 ndhG-ndhE 5 CTGCATGAATTCGCATTGCA ATCATTTCCAACACGTCCGT 20 20 45.0 45.0 58.1 57.8 18.2 0.0 0.262960 124334 124564 1601-1602 0.285714 49.4 ndhD-ccsA_p1 ndhD-ccsA 1 AAATGGGAGCATATGGGCTG TTCGGCAATTGTAGCTTCGA 20 20 50.0 45.0 58.0 57.9 4.6 7.4 0.092871 127035 127355 1132-1180 0.857143 81.2 ndhD-ccsA_p2 ndhD-ccsA 2 CTGCCAGGAATGAGTGGTTT GTTCCTTTCGTGGGGTTTCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.107803 127035 127355 1364-1412 0.857143 81.0 ndhD-ccsA_p3 ndhD-ccsA 3 AAATGGGAGCATATGGGCTG GTTCCTTTCGTGGGGTTTCT 20 20 50.0 50.0 58.0 58.0 4.6 0.0 0.028314 127035 127355 1762-1810 0.857143 80.4 ndhD-ccsA_p4 ndhD-ccsA 4 AAATGGGAGCATATGGGCTG AGCACAATTACGGCTACAGG 20 20 50.0 50.0 58.0 58.0 4.6 0.0 0.029546 127035 127355 1727-1743 0.285714 51.2 ndhD-ccsA_p5 ndhD-ccsA 5 AAATGGGAGCATATGGGCTG CAATTACGGCTACAGGTGCT 20 20 50.0 50.0 58.0 58.0 4.6 0.0 0.029546 127035 127355 1723-1739 0.285714 51.2 ccsA-trnL-UAG_p1 ccsA-trnL-UAG 1 AGAAACCCCACGAAAGGAAC TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.147221 128322 128465 452-463 0.857143 78.2 ccsA-trnL-UAG_p2 ccsA-trnL-UAG 2 AGAAACCCCACGAAAGGAAC AAATTGGTAGACACGCTGCT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.207948 128322 128465 459-470 0.857143 77.6 ccsA-trnL-UAG_p3 ccsA-trnL-UAG 3 AGCACCTGTAGCCGTAATTG TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.148453 128322 128465 523-523 0.285714 50.5 ccsA-trnL-UAG_p4 ccsA-trnL-UAG 4 CCTGTAGCCGTAATTGTGCT TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 58.0 57.9 4.1 0.0 0.148453 128322 128465 519-519 0.285714 50.5 ccsA-trnL-UAG_p5 ccsA-trnL-UAG 5 CCTGTAGCCGTAATTGTGCT AAATTGGTAGACACGCTGCT 20 20 50.0 45.0 58.0 57.8 4.1 0.0 0.209180 128322 128465 526-526 0.285714 50.1 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 TTTTATTAGGGGGATGCCGC AGACGGCGCAATTTAGTCAT 20 20 50.0 45.0 58.0 58.0 12.8 10.8 0.034469 128546 129578 1807-1809 0.285714 51.3 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 AGAAACCCCACGAAAGGAAC AGACGGCGCAATTTAGTCAT 20 20 50.0 45.0 58.0 58.0 0.0 10.8 0.047119 128546 129578 2184-2186 0.285714 51.3 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCACCTGTAGCCGTAATTG AGACGGCGCAATTTAGTCAT 20 20 50.0 45.0 58.0 58.0 0.0 10.8 0.048351 128546 129578 2255-2257 0.285714 51.3 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CCTGTAGCCGTAATTGTGCT AGACGGCGCAATTTAGTCAT 20 20 50.0 45.0 58.0 58.0 4.1 10.8 0.048351 128546 129578 2251-2253 0.285714 51.3 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 TTTTATTAGGGGGATGCCGC AAACGGGGATATTGGGAAGC 20 20 50.0 50.0 58.0 57.9 12.8 0.0 0.077659 128546 129578 1229-1230 0.285714 51.0 rpl32-ndhF_p1 rpl32-ndhF 1 GTACGTTTCTTTGGAACCGC ACAGTAACCGGGAGTGGAAT 20 20 50.0 50.0 57.7 58.3 0.0 6.3 0.652305 129744 130670 1008-1296 1.000000 83.4 rpl32-ndhF_p2 rpl32-ndhF 2 GTACGTTTCTTTGGAACCGC ACCGGGAGTGGAATAAAAGG 20 20 50.0 50.0 57.7 57.2 0.0 6.3 1.106328 129744 130670 1002-1290 1.000000 79.8 rpl32-ndhF_p3 rpl32-ndhF 3 GTACGTTTCTTTGGAACCGC CCGGGAGTGGAATAAAAGGT 20 20 50.0 50.0 57.7 57.2 0.0 0.0 1.106328 129744 130670 1001-1289 1.000000 79.8 rpl32-ndhF_p4 rpl32-ndhF 4 TACGTTTCTTTGGAACCGCC ACAGTAACCGGGAGTGGAAT 20 20 50.0 50.0 58.8 58.3 0.0 6.3 1.118520 129744 130670 1007-1295 1.000000 79.6 rpl32-ndhF_p5 rpl32-ndhF 5 GTACGTTTCTTTGGAACCGC CACGCATATGGGTATGTACGT 20 21 50.0 47.6 57.7 58.0 0.0 23.4 1.326521 129744 130670 975-1263 1.000000 78.2