feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH tRNA trnH trnH 4 76 -1 73 LSC 0.000000 0 0 300 212 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_001 igs trnH|psbA trnH-psbA 77 353 0 277 LSC 0.024691 6 34 300 290 yes 1.000000 2 1.000000 NA 0.877256 69.100000 psbA gene psbA psbA 354 1415 -1 1062 LSC 0.001883 2 0 59 173 yes 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_002 igs psbA|trnK psbA-trnK 1416 1534 0 119 LSC 0.000000 0 0 8 54 no 0.000000 1 0.000000 NA 1.000000 19.400000 trnK_part2 tRNA trnK trnK 1535 1722 -1 188 LSC 0.005319 1 0 127 109 no 1.000000 2 1.000000 NA 1.000000 48.700000 trnK_part2 tRNA trnK trnK 1686 1720 -1 35 LSC 0.000000 0 0 96 111 no 0.000000 1 0.000000 NA 1.000000 25.900000 matK gene matK matK 2022 3536 -1 1515 LSC 0.001320 2 0 189 300 no 1.000000 2 1.000000 NA 1.000000 58.700000 IGS_007 igs matK|trnK matK-trnK 3537 4293 0 757 LSC 0.000000 0 0 32 125 no 0.000000 1 0.000000 NA 1.000000 27.400000 trnK_part1 tRNA trnK trnK 4294 4415 -1 122 LSC 0.000000 0 1 300 3 no 1.000000 2 1.000000 NA 0.991803 38.500000 trnK_part1 tRNA trnK trnK 4295 4331 -1 37 LSC 0.000000 0 0 300 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_009 igs trnK|rps16 trnK-rps16 4332 4961 0 630 LSC 0.006359 4 1 300 114 no 1.000000 2 1.000000 NA 0.998413 56.100000 rps16 gene rps16 rps16 4962 6099 -1 1138 LSC 0.008795 10 1 282 70 yes 1.000000 2 1.000000 NA 0.999121 54.100000 IGS_010 igs rps16|trnQ rps16-trnQ 6100 6465 0 366 LSC 0.002732 1 0 219 261 no 1.000000 2 1.000000 NA 1.000000 55.400000 trnQ tRNA trnQ trnQ 6466 6537 -1 72 LSC 0.000000 0 0 295 189 no 0.000000 1 0.000000 NA 1.000000 32.900000 IGS_011 igs trnQ|psbK trnQ-psbK 6538 6867 0 330 LSC 0.015152 5 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 61.800000 psbK gene psbK psbK 6868 7053 1 186 LSC 0.000000 0 0 67 300 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_012 igs psbK|psbI psbK-psbI 7054 7436 0 383 LSC 0.000000 0 5 253 300 no 1.000000 2 1.000000 NA 0.986945 55.500000 psbI gene psbI psbI 7437 7547 1 111 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_013 igs psbI|trnS psbI-trnS 7548 7638 0 91 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnS tRNA trnS trnS 7639 7726 -1 88 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_014 igs trnS|trnG trnS-trnG 7727 8400 0 674 LSC 0.001522 1 17 300 300 yes 1.000000 2 1.000000 NA 0.974777 62.100000 trnG_part1 tRNA trnG trnG 8401 8423 1 23 LSC 0.000000 0 0 112 300 no 0.000000 1 0.000000 NA 1.000000 27.200000 trnG_part2 tRNA trnG trnG 9140 9188 1 49 LSC 0.000000 0 0 300 213 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_017 igs trnG|trnR trnG-trnR 9189 9318 0 130 LSC 0.000000 0 0 300 83 no 0.000000 1 0.000000 NA 1.000000 25.000000 trnR tRNA trnR trnR 9319 9390 1 72 LSC 0.000000 0 0 300 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_018 igs trnR|atpA trnR-atpA 9391 9683 0 293 LSC 0.013746 4 2 300 300 no 1.000000 2 1.000000 NA 0.993174 61.100000 atpA gene atpA atpA 9684 11207 -1 1524 LSC 0.001312 2 0 26 300 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_019 igs atpA|atpF atpA-atpF 11208 11274 0 67 LSC 0.000000 0 0 170 246 no 0.000000 1 0.000000 NA 1.000000 31.500000 atpF gene atpF atpF 11275 12551 -1 1277 LSC 0.000794 1 18 237 65 no 1.000000 2 1.000000 NA 0.985904 50.400000 IGS_020 igs atpF|atpH atpF-atpH 12552 13017 0 466 LSC 0.008621 4 2 300 300 no 1.000000 2 1.000000 NA 0.995708 61.300000 atpH gene atpH atpH 13018 13263 -1 246 LSC 0.000000 0 0 174 300 no 0.000000 1 0.000000 NA 1.000000 31.800000 IGS_021 igs atpH|atpI atpH-atpI 13264 13762 0 499 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.900000 atpI gene atpI atpI 13763 14512 -1 750 LSC 0.001333 1 0 300 250 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_022 igs atpI|rps2 atpI-rps2 14513 14758 0 246 LSC 0.000000 0 1 239 4 no 1.000000 2 1.000000 NA 0.995935 38.200000 rps2 gene rps2 rps2 14759 15469 -1 711 LSC 0.004219 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.200000 IGS_023 igs rps2|rpoC2 rps2-rpoC2 15470 15707 0 238 LSC 0.000000 0 1 242 300 no 1.000000 2 1.000000 NA 0.995798 52.900000 rpoC2 gene rpoC2 rpoC2 15708 19850 -1 4143 LSC 0.001207 5 0 300 17 no 1.000000 2 1.000000 NA 1.000000 40.800000 IGS_024 igs rpoC2|rpoC1 rpoC2-rpoC1 19851 20031 0 181 LSC 0.005525 1 0 71 300 no 1.000000 2 1.000000 NA 1.000000 46.000000 rpoC1 gene rpoC1 rpoC1 20032 22867 -1 2836 LSC 0.001410 4 0 163 300 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_025 igs rpoC1|rpoB rpoC1-rpoB 22868 22893 0 26 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoB gene rpoB rpoB 22894 26112 -1 3219 LSC 0.000932 3 0 300 13 no 1.000000 2 1.000000 NA 1.000000 41.800000 IGS_026 igs rpoB|trnC rpoB-trnC 26113 27215 0 1103 LSC 0.003626 4 0 85 285 no 1.000000 2 1.000000 NA 1.000000 52.200000 trnC tRNA trnC trnC 27216 27286 1 71 LSC 0.000000 0 0 27 214 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_027 igs trnC|petN trnC-petN 27287 27944 0 658 LSC 0.003040 2 0 98 164 no 1.000000 2 1.000000 NA 1.000000 52.800000 petN gene petN petN 27945 28034 1 90 LSC 0.000000 0 0 192 74 no 0.000000 1 0.000000 NA 1.000000 24.300000 IGS_028 igs petN|psbM petN-psbM 28035 28561 0 527 LSC 0.007752 4 11 282 300 yes 1.000000 2 1.000000 NA 0.979127 63.700000 psbM gene psbM psbM 28562 28666 -1 105 LSC 0.000000 0 0 73 300 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_029 igs psbM|trnD psbM-trnD 28667 29688 0 1022 LSC 0.001959 2 1 178 194 yes 1.000000 2 1.000000 NA 0.999022 58.300000 trnD tRNA trnD trnD 29689 29762 -1 74 LSC 0.000000 0 0 247 120 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_030 igs trnD|trnY trnD-trnY 29763 30185 0 423 LSC 0.014252 6 2 300 300 yes 1.000000 2 1.000000 NA 0.995272 63.700000 trnY tRNA trnY trnY 30186 30269 -1 84 LSC 0.000000 0 0 17 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_031 igs trnY|trnE trnY-trnE 30270 30328 0 59 LSC 0.000000 0 0 101 300 no 0.000000 1 0.000000 NA 1.000000 26.300000 trnE tRNA trnE trnE 30329 30401 -1 73 LSC 0.000000 0 0 160 300 no 0.000000 1 0.000000 NA 1.000000 30.800000 IGS_032 igs trnE|trnT trnE-trnT 30402 31222 0 821 LSC 0.003667 3 3 233 111 no 1.000000 2 1.000000 NA 0.996346 54.500000 trnT tRNA trnT trnT 31223 31294 1 72 LSC 0.000000 0 0 139 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_033 igs trnT|psbD trnT-psbD 31295 32378 0 1084 LSC 0.001845 2 0 211 276 no 1.000000 2 1.000000 NA 1.000000 59.800000 psbD gene psbD psbD 32379 33440 1 1062 LSC 0.001883 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.800000 psbC gene psbC psbC 33388 34809 1 1422 LSC 0.001406 2 0 300 217 no 1.000000 2 1.000000 NA 1.000000 59.600000 IGS_035 igs psbC|trnS psbC-trnS 34810 34987 0 178 LSC 0.000000 0 0 243 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 trnS tRNA trnS trnS 34988 35079 -1 92 LSC 0.010870 1 0 300 297 no 1.000000 2 1.000000 NA 1.000000 58.800000 IGS_036 igs trnS|psbZ trnS-psbZ 35080 35445 0 366 LSC 0.002732 1 0 52 300 no 1.000000 2 1.000000 NA 1.000000 44.300000 psbZ gene psbZ psbZ 35446 35634 1 189 LSC 0.000000 0 0 68 300 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_037 igs psbZ|trnG psbZ-trnG 35635 36126 0 492 LSC 0.004228 2 19 257 300 yes 1.000000 2 1.000000 NA 0.961382 62.700000 IGS_038 igs trnG|trnfM trnG-trnfM 36198 36330 0 133 LSC 0.000000 0 0 208 264 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnfM tRNA trnfM trnfM 36331 36404 -1 74 LSC 0.000000 0 0 300 190 no 0.000000 1 0.000000 NA 1.000000 33.000000 IGS_039 igs trnfM|rps14 trnfM-rps14 36405 36588 0 184 LSC 0.000000 0 0 300 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 rps14 gene rps14 rps14 36589 36891 -1 303 LSC 0.003300 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 IGS_040 igs rps14|psaB rps14-psaB 36892 37011 0 120 LSC 0.000000 0 0 296 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 37012 39216 -1 2205 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_041 igs psaB|psaA psaB-psaA 39217 39241 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 39242 41494 -1 2253 LSC 0.000888 2 0 300 207 no 1.000000 2 1.000000 NA 1.000000 57.700000 IGS_042 igs psaA|ycf3 psaA-ycf3 41495 42210 0 716 LSC 0.001397 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.600000 ycf3 gene ycf3 ycf3 42211 44197 -1 1987 LSC 0.000504 1 1 300 54 no 1.000000 2 1.000000 NA 0.999497 47.100000 IGS_043 igs ycf3|trnS ycf3-trnS 44198 44431 0 234 LSC 0.004274 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.000000 trnS tRNA trnS trnS 44432 44518 1 87 LSC 0.000000 0 0 179 275 no 0.000000 1 0.000000 NA 1.000000 32.200000 IGS_044 igs trnS|rps4 trnS-rps4 44519 44828 0 310 LSC 0.003226 1 0 266 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 rps4 gene rps4 rps4 44829 45434 -1 606 LSC 0.000000 0 0 34 87 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_045 igs rps4|trnT rps4-trnT 45435 45811 0 377 LSC 0.002653 1 0 300 85 no 1.000000 2 1.000000 NA 1.000000 47.000000 trnT tRNA trnT trnT 45812 45884 -1 73 LSC 0.000000 0 0 289 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_046 igs trnT|trnL trnT-trnL 45885 46688 0 804 LSC 0.003736 3 1 300 300 no 1.000000 2 1.000000 NA 0.998756 61.000000 trnL_part1 tRNA trnL trnL 46689 46723 1 35 LSC 0.000000 0 0 120 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 trnL_part1 tRNA trnL trnL 46695 46725 1 31 LSC 0.000000 0 0 126 300 no 0.000000 1 0.000000 NA 1.000000 28.200000 trnL_part2 tRNA trnL trnL 47247 47259 1 13 LSC 0.000000 0 0 300 123 no 0.000000 1 0.000000 NA 1.000000 28.000000 trnL_part2 tRNA trnL trnL 47248 47297 1 50 LSC 0.000000 0 0 300 85 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_052 igs trnL|trnF trnL-trnF 47298 47893 0 596 LSC 0.008389 5 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 63.500000 trnF tRNA trnF trnF 47894 47966 1 73 LSC 0.000000 0 0 31 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_053 igs trnF|ndhJ trnF-ndhJ 47967 48462 0 496 LSC 0.002016 1 0 104 206 no 1.000000 2 1.000000 NA 1.000000 50.500000 ndhJ gene ndhJ ndhJ 48463 48939 -1 477 LSC 0.004193 2 0 33 19 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_054 igs ndhJ|ndhK ndhJ-ndhK 48940 49041 0 102 LSC 0.019608 2 0 4 300 no 1.000000 2 1.000000 NA 1.000000 49.100000 ndhK gene ndhK ndhK 49042 49719 -1 678 LSC 0.000000 0 0 1 300 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_055 igs ndhK|ndhC ndhK-ndhC 49720 49787 0 68 LSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.985294 53.900000 ndhC gene ndhC ndhC 49788 50150 -1 363 LSC 0.000000 0 0 300 206 no 0.000000 1 0.000000 NA 1.000000 35.100000 IGS_056 igs ndhC|trnV ndhC-trnV 50151 50746 0 596 LSC 0.003367 2 2 300 300 no 1.000000 2 1.000000 NA 0.996644 60.900000 trnV_part2 tRNA trnV trnV 50747 50781 -1 35 LSC 0.000000 0 0 229 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV_part2 tRNA trnV trnV 50752 50781 -1 30 LSC 0.000000 0 0 234 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV_part1 tRNA trnV trnV 51381 51419 -1 39 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV_part1 tRNA trnV trnV 51381 51437 -1 57 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_062 igs trnV|trnM trnV-trnM 51438 51603 0 166 LSC 0.000000 0 0 300 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 trnM tRNA trnM trnM 51604 51676 1 73 LSC 0.000000 0 0 300 61 no 0.000000 1 0.000000 NA 1.000000 23.300000 IGS_063 igs trnM|atpE trnM-atpE 51677 51815 0 139 LSC 0.038168 5 8 300 300 yes 1.000000 2 1.000000 NA 0.942446 78.800000 atpE gene atpE atpE 51816 52214 -1 399 LSC 0.000000 0 0 59 167 no 0.000000 1 0.000000 NA 1.000000 25.200000 atpB gene atpB atpB 52211 53707 -1 1497 LSC 0.001336 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_065 igs atpB|rbcL atpB-rbcL 53708 54487 0 780 LSC 0.002571 2 2 300 300 no 1.000000 2 1.000000 NA 0.997436 60.500000 rbcL gene rbcL rbcL 54488 55951 1 1464 LSC 0.000000 0 0 48 144 no 0.000000 1 0.000000 NA 1.000000 28.600000 IGS_066 igs rbcL|accD rbcL-accD 55952 56650 0 699 LSC 0.004317 3 4 300 300 no 1.000000 2 1.000000 NA 0.994278 61.800000 accD gene accD accD 56651 58090 1 1440 LSC 0.000694 1 0 300 110 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_067 igs accD|psaI accD-psaI 58091 58758 0 668 LSC 0.006051 4 7 55 300 yes 1.000000 2 1.000000 NA 0.989521 52.400000 psaI gene psaI psaI 58759 58872 1 114 LSC 0.000000 0 0 261 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_068 igs psaI|ycf4 psaI-ycf4 58873 59275 0 403 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 35.900000 ycf4 gene ycf4 ycf4 59276 59830 1 555 LSC 0.000000 0 0 300 36 no 0.000000 1 0.000000 NA 1.000000 26.800000 IGS_069 igs ycf4|cemA ycf4-cemA 59831 60243 0 413 LSC 0.004843 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.600000 cemA gene cemA cemA 60244 60933 1 690 LSC 0.000000 0 0 225 144 no 0.000000 1 0.000000 NA 1.000000 35.800000 IGS_070 igs cemA|petA cemA-petA 60934 61185 0 252 LSC 0.011952 3 1 300 300 no 1.000000 2 1.000000 NA 0.996032 59.800000 petA gene petA petA 61186 62148 1 963 LSC 0.000000 0 0 103 58 no 0.000000 1 0.000000 NA 1.000000 29.300000 IGS_071 igs petA|psbJ petA-psbJ 62149 63034 0 886 LSC 0.001130 1 1 300 222 no 1.000000 2 1.000000 NA 0.998871 59.500000 psbJ gene psbJ psbJ 63035 63157 -1 123 LSC 0.000000 0 0 300 99 no 0.000000 1 0.000000 NA 1.000000 26.200000 IGS_072 igs psbJ|psbL psbJ-psbL 63158 63300 0 143 LSC 0.006993 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 psbL gene psbL psbL 63301 63417 -1 117 LSC 0.000000 0 0 43 300 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_073 igs psbL|psbF psbL-psbF 63418 63438 0 21 LSC 0.000000 0 0 160 300 no 0.000000 1 0.000000 NA 1.000000 30.800000 psbF gene psbF psbF 63439 63558 -1 120 LSC 0.000000 0 0 181 300 no 0.000000 1 0.000000 NA 1.000000 32.300000 IGS_074 igs psbF|psbE psbF-psbE 63559 63567 0 9 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 63568 63819 -1 252 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_075 igs psbE|petL psbE-petL 63820 64684 0 865 LSC 0.001157 1 1 300 25 no 1.000000 2 1.000000 NA 0.998844 46.400000 petL gene petL petL 64685 64780 1 96 LSC 0.010417 1 0 300 92 no 1.000000 2 1.000000 NA 1.000000 50.400000 IGS_076 igs petL|petG petL-petG 64781 64967 0 187 LSC 0.005376 1 1 70 124 no 1.000000 2 1.000000 NA 0.994652 46.400000 petG gene petG petG 64968 65081 1 114 LSC 0.000000 0 0 94 10 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_077 igs petG|trnW petG-trnW 65082 65205 0 124 LSC 0.008065 1 0 208 81 no 1.000000 2 1.000000 NA 1.000000 48.200000 trnW tRNA trnW trnW 65206 65279 -1 74 LSC 0.000000 0 0 113 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_078 igs trnW|trnP trnW-trnP 65280 65471 0 192 LSC 0.015625 3 0 187 300 no 1.000000 2 1.000000 NA 1.000000 60.500000 trnP tRNA trnP trnP 65472 65545 -1 74 LSC 0.000000 0 0 56 300 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_079 igs trnP|psaJ trnP-psaJ 65546 65902 0 357 LSC 0.002801 1 0 130 68 no 1.000000 2 1.000000 NA 1.000000 45.400000 psaJ gene psaJ psaJ 65903 66037 1 135 LSC 0.007407 1 0 17 72 no 1.000000 2 1.000000 NA 1.000000 43.000000 IGS_080 igs psaJ|rpl33 psaJ-rpl33 66038 66468 0 431 LSC 0.006961 3 0 66 128 no 1.000000 2 1.000000 NA 1.000000 49.200000 rpl33 gene rpl33 rpl33 66469 66669 1 201 LSC 0.004975 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_081 igs rpl33|rps18 rpl33-rps18 66670 66902 0 233 LSC 0.000000 0 0 72 300 no 0.000000 1 0.000000 NA 1.000000 24.100000 rps18 gene rps18 rps18 66903 67208 1 306 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.900000 IGS_082 igs rps18|rpl20 rps18-rpl20 67209 67497 0 289 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl20 gene rpl20 rpl20 67498 67851 -1 354 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.900000 IGS_083 igs rpl20|rps12 rpl20-rps12 67852 68627 0 776 LSC 0.005155 4 0 300 200 yes 1.000000 2 1.000000 NA 1.000000 61.700000 rps12_part1 gene rps12 rps12 68628 68741 -1 114 LSC 0.000000 0 0 38 86 no 0.000000 1 0.000000 NA 1.000000 21.600000 IGS_084 igs rps12|clpP rps12-clpP 68742 68924 0 183 LSC 0.038251 7 0 152 300 yes 1.000000 2 1.000000 NA 1.000000 70.900000 clpP gene clpP clpP 68925 70893 -1 1969 LSC 0.001018 2 4 90 300 no 1.000000 2 1.000000 NA 0.997969 50.300000 IGS_085 igs clpP|psbB clpP-psbB 70894 71409 0 516 LSC 0.001942 1 1 300 300 no 1.000000 2 1.000000 NA 0.998062 58.300000 psbB gene psbB psbB 71410 72936 1 1527 LSC 0.001310 2 0 123 38 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_086 igs psbB|psbT psbB-psbT 72937 73114 0 178 LSC 0.005618 1 0 300 149 no 1.000000 2 1.000000 NA 1.000000 51.900000 psbT gene psbT psbT 73115 73216 1 102 LSC 0.000000 0 0 139 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_087 igs psbT|psbN psbT-psbN 73217 73281 0 65 LSC 0.015385 1 0 241 300 no 1.000000 2 1.000000 NA 1.000000 61.300000 psbN gene psbN psbN 73282 73413 -1 132 LSC 0.000000 0 0 17 178 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_088 igs psbN|psbH psbN-psbH 73414 73517 0 104 LSC 0.000000 0 0 149 74 no 0.000000 1 0.000000 NA 1.000000 24.300000 psbH gene psbH psbH 73518 73739 1 222 LSC 0.004505 1 0 253 300 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_089 igs psbH|petB psbH-petB 73740 73873 0 134 LSC 0.000000 0 0 147 235 no 0.000000 1 0.000000 NA 1.000000 29.800000 petB gene petB petB 73874 75297 1 1424 LSC 0.001405 2 1 281 7 no 1.000000 2 1.000000 NA 0.999298 45.200000 IGS_090 igs petB|petD petB-petD 75298 75496 0 199 LSC 0.005025 1 0 300 184 no 1.000000 2 1.000000 NA 1.000000 54.200000 petD gene petD petD 75497 76700 1 1204 LSC 0.001663 2 1 191 29 no 1.000000 2 1.000000 NA 0.999169 47.000000 IGS_091 igs petD|rpoA petD-rpoA 76701 76874 0 174 LSC 0.011494 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 rpoA gene rpoA rpoA 76875 77858 -1 984 LSC 0.000000 0 0 142 236 no 0.000000 1 0.000000 NA 1.000000 35.600000 IGS_092 igs rpoA|rps11 rpoA-rps11 77859 77927 0 69 LSC 0.000000 0 0 300 167 no 0.000000 1 0.000000 NA 1.000000 31.300000 rps11 gene rps11 rps11 77928 78344 -1 417 LSC 0.004796 2 0 300 73 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_093 igs rps11|rpl36 rps11-rpl36 78345 78452 0 108 LSC 0.009259 1 0 240 300 no 1.000000 2 1.000000 NA 1.000000 57.800000 rpl36 gene rpl36 rpl36 78453 78566 -1 114 LSC 0.000000 0 0 34 300 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_094 igs rpl36|rps8 rpl36-rps8 78567 79039 0 473 LSC 0.000000 0 0 148 239 no 0.000000 1 0.000000 NA 1.000000 33.500000 rps8 gene rps8 rps8 79040 79444 -1 405 LSC 0.002469 1 0 300 180 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_095 igs rps8|rpl14 rps8-rpl14 79445 79653 0 209 LSC 0.009615 2 1 165 300 no 1.000000 2 1.000000 NA 0.995215 55.900000 rpl14 gene rpl14 rpl14 79654 80022 -1 369 LSC 0.000000 0 0 27 300 no 0.000000 1 0.000000 NA 1.000000 22.200000 IGS_096 igs rpl14|rpl16 rpl14-rpl16 80023 80166 0 144 LSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.993056 53.200000 rpl16 gene rpl16 rpl16 80167 81681 -1 1515 LSC 0.001321 2 1 300 255 no 1.000000 2 1.000000 NA 0.999340 59.500000 IGS_097 igs rpl16|rps3 rpl16-rps3 81682 81874 0 193 LSC 0.000000 0 5 151 62 no 1.000000 2 1.000000 NA 0.974093 44.700000 rps3 gene rps3 rps3 81875 82531 -1 657 LSC 0.006088 4 0 300 160 no 1.000000 2 1.000000 NA 1.000000 59.300000 rpl22 gene rpl22 rpl22 82516 82998 -1 483 LSC 0.004141 2 0 193 300 no 1.000000 2 1.000000 NA 1.000000 58.200000 IGS_099 igs rpl22|rps19 rpl22-rps19 82999 83052 0 54 LSC 0.000000 0 0 262 278 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps19 gene rps19 rps19 83053 83331 -1 279 LSC 0.003584 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 IGS_100 igs rps19|rpl2 rps19-rpl2 83332 83384 0 53 IRb 0.000000 0 0 0 300 no 0.000000 1 0.000000 NA 1.000000 18.800000 rpl2 gene rpl2 rpl2 83385 84891 -1 1507 IRb 0.000664 1 0 53 300 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_101 igs rpl2|rpl23 rpl2-rpl23 84892 84909 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 84910 85191 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_102 igs rpl23|trnI rpl23-trnI 85192 85359 0 168 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_103 igs trnI|ycf2 trnI-ycf2 85434 85521 0 88 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 85522 92343 1 6822 IRb 0.000147 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_104 igs ycf2|ycf15 ycf2-ycf15 92344 92479 0 136 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf15 gene ycf15 ycf15 92480 92713 1 234 IRb 0.000000 0 0 300 160 no 0.000000 1 0.000000 NA 1.000000 30.800000 IGS_105 igs ycf15|trnL ycf15-trnL 92714 93242 0 529 IRb 0.001890 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.400000 IGS_106 igs trnL|ndhB trnL-ndhB 93324 93899 0 576 IRb 0.000000 0 0 300 57 no 0.000000 1 0.000000 NA 1.000000 28.800000 ndhB gene ndhB ndhB 93900 96123 -1 2224 IRb 0.001349 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_107 igs ndhB|rps7 ndhB-rps7 96124 96435 0 312 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.000000 rps7 gene rps7 rps7 96436 96903 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_108 igs rps7|rps12 rps7-rps12 96904 96956 0 53 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 96957 97751 -1 795 IRb 0.001258 1 0 300 285 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_109 igs rps12|trnV rps12-trnV 97752 99667 0 1916 IRb 0.001044 2 1 194 300 no 1.000000 2 1.000000 NA 0.999478 58.100000 IGS_110 igs trnV|trnI trnV-trnI 99740 101699 0 1960 IRb 0.000000 0 0 300 41 no 0.000000 1 0.000000 NA 1.000000 27.100000 trnI_part1 tRNA trnI trnI 101700 101797 1 98 IRb 0.010204 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.400000 trnI_part1 tRNA trnI trnI 101760 101796 1 37 IRb 0.000000 0 0 18 300 no 0.000000 1 0.000000 NA 1.000000 20.100000 trnI_part2 tRNA trnI trnI 102742 102974 1 233 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 102744 102778 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_116 igs trnI|trnA trnI-trnA 102779 102842 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 102843 102880 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 103681 103715 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_119 igs trnA|rrn23S trnA-rrn23S 103716 103867 0 152 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 103868 106677 1 2810 IRb 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_120 igs rrn23S|rrn5S rrn23S-rrn5S 106678 107125 0 448 IRb 0.002232 1 0 300 180 no 1.000000 2 1.000000 NA 1.000000 55.400000 rrn5S rRNA rrn5S rrn5S 107126 107246 1 121 IRb 0.000000 0 0 130 59 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_121 igs rrn5S|trnR rrn5S-trnR 107247 107501 0 255 IRb 0.003922 1 0 251 300 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnR tRNA trnR trnR 107502 107575 1 74 IRb 0.000000 0 0 195 300 no 0.000000 1 0.000000 NA 1.000000 33.400000 IGS_122 igs trnR|trnN trnR-trnN 107576 108237 0 662 IRb 0.000000 0 6 269 300 no 1.000000 2 1.000000 NA 0.990937 59.600000 trnN tRNA trnN trnN 108238 108309 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_123 igs trnN|ndhF trnN-ndhF 108310 109631 0 1322 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 ndhF gene ndhF ndhF 109632 111866 -1 2235 SSC 0.002237 5 0 300 110 no 1.000000 2 1.000000 NA 1.000000 51.800000 IGS_124 igs ndhF|rpl32 ndhF-rpl32 111867 112724 0 858 SSC 0.012865 11 3 300 291 yes 1.000000 2 1.000000 NA 0.996503 66.500000 rpl32 gene rpl32 rpl32 112725 112883 1 159 SSC 0.000000 0 0 119 132 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_125 igs rpl32|trnL rpl32-trnL 112884 113781 0 898 SSC 0.014574 13 6 278 300 yes 1.000000 2 1.000000 NA 0.993318 67.800000 IGS_126 igs trnL|ccsA trnL-ccsA 113862 113975 0 114 SSC 0.000000 0 3 181 242 no 1.000000 2 1.000000 NA 0.973684 53.600000 ccsA gene ccsA ccsA 113976 114968 1 993 SSC 0.003021 3 0 295 300 no 1.000000 2 1.000000 NA 1.000000 60.500000 IGS_127 igs ccsA|ndhD ccsA-ndhD 114969 115184 0 216 SSC 0.000000 0 1 26 300 no 1.000000 2 1.000000 NA 0.995370 39.900000 ndhD gene ndhD ndhD 115185 116705 -1 1521 SSC 0.001972 3 0 242 129 no 1.000000 2 1.000000 NA 1.000000 54.500000 IGS_128 igs ndhD|psaC ndhD-psaC 116706 116842 0 137 SSC 0.007299 1 0 300 123 no 1.000000 2 1.000000 NA 1.000000 50.900000 psaC gene psaC psaC 116843 117088 -1 246 SSC 0.004065 1 0 7 300 no 1.000000 2 1.000000 NA 1.000000 40.400000 IGS_129 igs psaC|ndhE psaC-ndhE 117089 117327 0 239 SSC 0.000000 0 0 122 232 no 0.000000 1 0.000000 NA 1.000000 27.900000 ndhE gene ndhE ndhE 117328 117633 -1 306 SSC 0.003268 1 0 300 123 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_130 igs ndhE|ndhG ndhE-ndhG 117634 117890 0 257 SSC 0.007782 2 0 73 289 no 1.000000 2 1.000000 NA 1.000000 47.400000 ndhG gene ndhG ndhG 117891 118421 -1 531 SSC 0.001883 1 0 102 67 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_131 igs ndhG|ndhI ndhG-ndhI 118422 118770 0 349 SSC 0.005831 2 6 241 300 no 1.000000 2 1.000000 NA 0.982808 58.500000 ndhI gene ndhI ndhI 118771 119274 -1 504 SSC 0.001984 1 0 247 15 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_132 igs ndhI|ndhA ndhI-ndhA 119275 119358 0 84 SSC 0.023810 2 0 152 255 yes 1.000000 2 1.000000 NA 1.000000 62.600000 ndhA gene ndhA ndhA 119359 121527 -1 2169 SSC 0.003230 7 2 3 300 yes 1.000000 2 1.000000 NA 0.999078 44.500000 IGS_133 igs ndhA|ndhH ndhA-ndhH 121528 121528 0 1 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhH gene ndhH ndhH 121529 122710 -1 1182 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_134 igs ndhH|rps15 ndhH-rps15 122711 122812 0 102 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps15 gene rps15 rps15 122813 123079 -1 267 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_135 igs rps15|ycf1 rps15-ycf1 123080 123430 0 351 SSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.997151 53.800000 ycf1 gene ycf1 ycf1 123431 128812 -1 5382 SSC 0.002796 15 18 300 300 no 1.000000 2 1.000000 NA 0.996656 54.400000 IGS_136 igs ycf1|trnN ycf1-trnN 128813 129132 0 320 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 trnN tRNA trnN trnN 129133 129204 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs trnN|trnR trnN-trnR 129205 129866 0 662 IRa 0.000000 0 6 300 269 no 1.000000 2 1.000000 NA 0.990937 59.600000 trnR tRNA trnR trnR 129867 129940 -1 74 IRa 0.000000 0 0 300 195 no 0.000000 1 0.000000 NA 1.000000 33.400000 IGS_138 igs trnR|rrn4.5S trnR-rrn4.5S 129941 130563 0 623 IRa 0.003210 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 rrn4.5S rRNA rrn4.5S rrn4.5S 130564 130666 -1 103 IRa 0.000000 0 0 116 300 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_139 igs rrn4.5S|trnA rrn4.5S-trnA 130667 133726 0 3060 IRa 0.000327 1 0 219 300 no 1.000000 2 1.000000 NA 1.000000 55.700000 trnA_part2 tRNA trnA trnA 133727 133761 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 134468 134700 -1 233 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 134562 134599 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_144 igs trnA|trnI trnA-trnI 134600 134663 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 134664 134698 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 135645 135742 -1 98 IRa 0.010204 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.400000 trnI_part1 tRNA trnI trnI 135646 135682 -1 37 IRa 0.000000 0 0 300 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_148 igs trnI|rrn16S trnI-rrn16S 135683 135980 0 298 IRa 0.003356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 rrn16S rRNA rrn16S rrn16S 135981 137471 -1 1491 IRa 0.000000 0 0 279 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_149 igs rrn16S|trnV rrn16S-trnV 137472 137702 0 231 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_150 igs trnV|rps12 trnV-rps12 137775 139690 0 1916 IRa 0.001044 2 1 300 194 no 1.000000 2 1.000000 NA 0.999478 58.100000 rps12_part2 gene rps12 rps12 139691 140485 1 795 IRa 0.001258 1 0 285 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_151 igs rps12|rps7 rps12-rps7 140486 140538 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 140539 141006 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_152 igs rps7|ndhB rps7-ndhB 141007 141318 0 312 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.000000 ndhB gene ndhB ndhB 141319 143542 1 2224 IRa 0.001349 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_153 igs ndhB|trnL ndhB-trnL 143543 144118 0 576 IRa 0.000000 0 0 57 300 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_154 igs trnL|ycf15 trnL-ycf15 144200 144728 0 529 IRa 0.001890 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.400000 ycf15 gene ycf15 ycf15 144729 144962 -1 234 IRa 0.000000 0 0 160 300 no 0.000000 1 0.000000 NA 1.000000 30.800000 IGS_155 igs ycf15|ycf2 ycf15-ycf2 144963 145098 0 136 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 145099 151920 -1 6822 IRa 0.000147 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_156 igs ycf2|trnI ycf2-trnI 151921 152008 0 88 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_157 igs trnI|rpl23 trnI-rpl23 152083 152250 0 168 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 152251 152532 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_158 igs rpl23|rpl2 rpl23-rpl2 152533 152550 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 152551 154057 1 1507 IRa 0.000664 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_159 igs rpl2|trnH rpl2-trnH 154058 3 0 169 LSC 0.000000 0 0 300 285 no 0.000000 1 0.000000 NA 1.000000 33.800000