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PhapfoPp092-PhapfoPp093

SSC · 112068-112394 · 327 bp

Back to Phalaenopsis

Pi 0.0485

MarkerSeek score 71.30

Primer available yes

Label PhapfoPp092-PhapfoPp093

Feature Metadata

label_name: PhapfoPp092-PhapfoPp093
feature_type: igs
region: SSC
length_bp: 327
variable_sites: 43
pi: 0.0485
unique_haplotype_count: 12
primer_available: yes
alignment_reliability: 0.91
markerseek_score: 71.30

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
PhapfoPp092-PhapfoPp093_p1	GCTTCCTTCGTAACTCCAGG	TCCTAAGAGCAGCGTGTCTA	55.0	50.0	58.0	57.9	1295-1588 bp	1.0	89.8
PhapfoPp092-PhapfoPp093_p2	GCTTCCTTCGTAACTCCAGG	GTCCCGAAGAAATCCAACGA	55.0	50.0	58.0	57.9	1673-1958 bp	1.0	89.6
PhapfoPp092-PhapfoPp093_p3	GCTTCCTTCGTAACTCCAGG	CCCGAAGAAATCCAACGAGT	55.0	50.0	58.0	57.9	1671-1956 bp	1.0	89.5
PhapfoPp092-PhapfoPp093_p4	GGATCTTTAGCGGCAGTCAA	GTCCCGAAGAAATCCAACGA	50.0	50.0	58.0	57.9	1109-1162 bp	0.642857	74.0
PhapfoPp092-PhapfoPp093_p5	GGATCTTTAGCGGCAGTCAA	CCCGAAGAAATCCAACGAGT	50.0	50.0	58.0	57.9	1107-1160 bp	0.642857	73.9