feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GTG tRNA trnH-GTG trnH-GTG 1 74 -1 74 LSC 0.000000 0 0 300 54 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_001 igs trnH-GTG|psbA trnH-GTG-psbA 75 465 0 391 LSC 0.080925 28 45 300 300 yes 1.000000 2 1.000000 NA 0.884910 88.900000 psbA gene psbA psbA 466 1527 -1 1062 LSC 0.000000 0 0 32 144 no 0.000000 1 0.000000 NA 1.000000 27.400000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1528 1727 0 200 LSC 0.015000 3 0 300 233 no 1.000000 2 1.000000 NA 1.000000 61.100000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1728 1762 -1 35 LSC 0.000000 0 0 32 198 no 0.000000 1 0.000000 NA 1.000000 21.100000 matK gene matK matK 2073 3590 -1 1518 LSC 0.007905 12 0 29 18 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3591 4320 0 730 LSC 0.006849 5 0 37 300 no 1.000000 2 1.000000 NA 1.000000 50.500000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4321 4357 -1 37 LSC 0.000000 0 0 199 263 no 0.000000 1 0.000000 NA 1.000000 33.700000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4358 5199 0 842 LSC 0.008333 7 2 236 300 no 1.000000 2 1.000000 NA 0.997625 63.800000 rps16 gene rps16 rps16 5200 6304 -1 1105 LSC 0.001825 2 9 62 136 no 1.000000 2 1.000000 NA 0.991855 50.200000 IGS_007 igs rps16|trnQ-TTG rps16-trnQ-TTG 6305 7204 0 900 LSC 0.007778 7 0 300 140 no 1.000000 2 1.000000 NA 1.000000 58.700000 trnQ-TTG tRNA trnQ-TTG trnQ-TTG 7205 7276 -1 72 LSC 0.000000 0 0 96 68 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_008 igs trnQ-TTG|psbK trnQ-TTG-psbK 7277 7631 0 355 LSC 0.005731 2 6 168 52 no 1.000000 2 1.000000 NA 0.983099 47.500000 psbK gene psbK psbK 7632 7811 1 180 LSC 0.005556 1 0 251 256 no 1.000000 2 1.000000 NA 1.000000 55.700000 IGS_009 igs psbK|psbI psbK-psbI 7812 8211 0 400 LSC 0.005089 2 7 127 131 no 1.000000 2 1.000000 NA 0.982500 53.700000 psbI gene psbI psbI 8212 8322 1 111 LSC 0.000000 0 0 31 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_010 igs psbI|trnS-GCT psbI-trnS-GCT 8323 8455 0 133 LSC 0.022556 3 0 142 300 no 1.000000 2 1.000000 NA 1.000000 61.100000 trnS-GCT tRNA trnS-GCT trnS-GCT 8456 8543 -1 88 LSC 0.000000 0 0 93 247 no 0.000000 1 0.000000 NA 1.000000 25.700000 IGS_011 igs trnS-GCT|trnC-GCA trnS-GCT-trnC-GCA 8544 9279 0 736 LSC 0.008152 6 0 181 118 no 1.000000 2 1.000000 NA 1.000000 57.300000 trnC-GCA tRNA trnC-GCA trnC-GCA 9280 9350 1 71 LSC 0.000000 0 0 102 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_012 igs trnC-GCA|psbM trnC-GCA-psbM 9351 10533 0 1183 LSC 0.006879 8 20 173 176 no 1.000000 2 1.000000 NA 0.983094 62.300000 psbM gene psbM psbM 10534 10638 -1 105 LSC 0.000000 0 0 46 71 no 0.000000 1 0.000000 NA 1.000000 22.200000 IGS_013 igs psbM|trnD-GTC psbM-trnD-GTC 10639 11302 0 664 LSC 0.006024 4 0 151 187 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnD-GTC tRNA trnD-GTC trnD-GTC 11303 11376 -1 74 LSC 0.000000 0 0 99 113 no 0.000000 1 0.000000 NA 1.000000 26.200000 IGS_014 igs trnD-GTC|trnY-GTA trnD-GTC-trnY-GTA 11377 11496 0 120 LSC 0.008333 1 0 173 300 no 1.000000 2 1.000000 NA 1.000000 55.300000 trnY-GTA tRNA trnY-GTA trnY-GTA 11497 11580 -1 84 LSC 0.000000 0 0 6 300 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_015 igs trnY-GTA|trnE-TTC trnY-GTA-trnE-TTC 11581 11779 0 199 LSC 0.000000 0 0 90 300 no 0.000000 1 0.000000 NA 1.000000 25.500000 trnE-TTC tRNA trnE-TTC trnE-TTC 11780 11851 -1 72 LSC 0.000000 0 0 289 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_016 igs trnE-TTC|rpoB trnE-TTC-rpoB 11852 12725 0 874 LSC 0.004614 4 7 300 246 no 1.000000 2 1.000000 NA 0.991991 62.200000 rpoB gene rpoB rpoB 12726 15908 1 3183 LSC 0.000943 3 0 198 300 no 1.000000 2 1.000000 NA 1.000000 55.700000 IGS_017 igs rpoB|rpoC1 rpoB-rpoC1 15909 15934 0 26 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 15935 18737 1 2803 LSC 0.001791 5 12 300 300 no 1.000000 2 1.000000 NA 0.995719 57.500000 IGS_018 igs rpoC1|rpoC2 rpoC1-rpoC2 18738 18844 0 107 LSC 0.000000 0 0 284 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC2 gene rpoC2 rpoC2 18845 22987 1 4143 LSC 0.002655 11 0 300 89 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_019 igs rpoC2|rps2 rpoC2-rps2 22988 23238 0 251 LSC 0.008032 2 2 300 165 no 1.000000 2 1.000000 NA 0.992032 55.300000 rps2 gene rps2 rps2 23239 23949 1 711 LSC 0.002813 2 0 150 194 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_020 igs rps2|atpI rps2-atpI 23950 24164 0 215 LSC 0.004651 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 atpI gene atpI atpI 24165 24908 1 744 LSC 0.002688 2 0 20 204 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_021 igs atpI|atpH atpI-atpH 24909 26031 0 1123 LSC 0.004452 5 0 276 300 no 1.000000 2 1.000000 NA 1.000000 61.300000 atpH gene atpH atpH 26032 26277 1 246 LSC 0.000000 0 0 104 243 no 0.000000 1 0.000000 NA 1.000000 26.600000 IGS_022 igs atpH|atpF atpH-atpF 26278 26631 0 354 LSC 0.005650 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.900000 atpF gene atpF atpF 26632 27885 1 1254 LSC 0.001595 2 0 105 25 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_023 igs atpF|atpA atpF-atpA 27886 27955 0 70 LSC 0.030303 2 4 297 300 no 1.000000 2 1.000000 NA 0.942857 74.400000 atpA gene atpA atpA 27956 29482 1 1527 LSC 0.001310 2 0 30 36 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_024 igs atpA|trnR-TCT atpA-trnR-TCT 29483 29603 0 121 LSC 0.033058 4 0 300 257 no 1.000000 2 1.000000 NA 1.000000 71.500000 trnR-TCT tRNA trnR-TCT trnR-TCT 29604 29675 -1 72 LSC 0.000000 0 0 81 185 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_025 igs trnR-TCT|trnT-GGT trnR-TCT-trnT-GGT 29676 30845 0 1170 LSC 0.003445 4 9 153 69 no 1.000000 2 1.000000 NA 0.992308 51.600000 trnT-GGT tRNA trnT-GGT trnT-GGT 30846 30917 1 72 LSC 0.013889 1 0 300 63 no 1.000000 2 1.000000 NA 1.000000 50.200000 IGS_026 igs trnT-GGT|psbD trnT-GGT-psbD 30918 32119 0 1202 LSC 0.007563 9 12 2 260 no 1.000000 2 1.000000 NA 0.990017 49.200000 psbD gene psbD psbD 32120 33181 1 1062 LSC 0.000942 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.300000 psbC gene psbC psbC 33129 34550 1 1422 LSC 0.000703 1 0 300 125 no 1.000000 2 1.000000 NA 1.000000 53.500000 IGS_028 igs psbC|trnS-TGA psbC-trnS-TGA 34551 34761 0 211 LSC 0.004785 1 2 114 221 no 1.000000 2 1.000000 NA 0.990521 49.700000 trnS-TGA tRNA trnS-TGA trnS-TGA 34762 34844 -1 83 LSC 0.000000 0 0 85 138 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_029 igs trnS-TGA|psbZ trnS-TGA-psbZ 34845 35189 0 345 LSC 0.005797 2 0 168 205 no 1.000000 2 1.000000 NA 1.000000 54.400000 psbZ gene psbZ psbZ 35190 35378 1 189 LSC 0.000000 0 0 186 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_030 igs psbZ|trnG-GCC psbZ-trnG-GCC 35379 35691 0 313 LSC 0.006390 2 0 300 199 no 1.000000 2 1.000000 NA 1.000000 56.400000 trnG-GCC tRNA trnG-GCC trnG-GCC 35692 35762 1 71 LSC 0.000000 0 0 222 128 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_031 igs trnG-GCC|trnM-CAT trnG-GCC-trnM-CAT 35763 35938 0 176 LSC 0.022857 4 1 293 300 no 1.000000 2 1.000000 NA 0.994318 66.200000 trnM-CAT tRNA trnM-CAT trnM-CAT 35939 36012 -1 74 LSC 0.000000 0 0 39 300 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_032 igs trnM-CAT|rps14 trnM-CAT-rps14 36013 36166 0 154 LSC 0.000000 0 0 113 300 no 0.000000 1 0.000000 NA 1.000000 27.200000 rps14 gene rps14 rps14 36167 36469 -1 303 LSC 0.000000 0 0 267 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_033 igs rps14|psaB rps14-psaB 36470 36602 0 133 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 36603 38807 -1 2205 LSC 0.000454 1 0 300 274 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_034 igs psaB|psaA psaB-psaA 38808 38832 0 25 LSC 0.000000 0 0 300 249 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 38833 41085 -1 2253 LSC 0.002663 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.700000 IGS_035 igs psaA|ycf3 psaA-ycf3 41086 41811 0 726 LSC 0.018233 13 13 110 221 no 1.000000 2 1.000000 NA 0.982094 64.200000 ycf3 gene ycf3 ycf3 41812 43759 -1 1948 LSC 0.001546 3 7 43 228 no 1.000000 2 1.000000 NA 0.996407 47.300000 IGS_036 igs ycf3|trnS-GGA ycf3-trnS-GGA 43760 44600 0 841 LSC 0.007186 6 6 224 300 no 1.000000 2 1.000000 NA 0.992866 63.600000 trnS-GGA tRNA trnS-GGA trnS-GGA 44601 44687 1 87 LSC 0.000000 0 0 98 270 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_037 igs trnS-GGA|rps4 trnS-GGA-rps4 44688 45014 0 327 LSC 0.003058 1 0 185 113 no 1.000000 2 1.000000 NA 1.000000 48.300000 rps4 gene rps4 rps4 45015 45620 -1 606 LSC 0.001650 1 0 56 300 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_038 igs rps4|trnT-TGT rps4-trnT-TGT 45621 45978 0 358 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 35.000000 trnT-TGT tRNA trnT-TGT trnT-TGT 45979 46051 -1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_039 igs trnT-TGT|trnF-GAA trnT-TGT-trnF-GAA 46052 47432 0 1381 LSC 0.001481 2 31 300 300 no 1.000000 2 1.000000 NA 0.977552 61.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 47433 47505 1 73 LSC 0.000000 0 0 120 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_040 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47506 48207 0 702 LSC 0.001435 1 5 193 300 no 1.000000 2 1.000000 NA 0.992877 59.700000 ndhJ gene ndhJ ndhJ 48208 48684 -1 477 LSC 0.000000 0 0 300 67 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_041 igs ndhJ|ndhK ndhJ-ndhK 48685 48786 0 102 LSC 0.019608 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 63.800000 ndhK gene ndhK ndhK 48787 49464 -1 678 LSC 0.000000 0 0 2 67 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_042 igs ndhK|ndhC ndhK-ndhC 49465 49516 0 52 LSC 0.000000 0 0 300 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 ndhC gene ndhC ndhC 49517 49879 -1 363 LSC 0.005510 2 0 300 51 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_043 igs ndhC|trnM-CAT ndhC-trnM-CAT 49880 51856 0 1977 LSC 0.006663 13 26 188 235 no 1.000000 2 1.000000 NA 0.986849 62.000000 trnM-CAT tRNA trnM-CAT trnM-CAT 51857 51929 1 73 LSC 0.000000 0 0 300 162 no 0.000000 1 0.000000 NA 1.000000 30.900000 IGS_044 igs trnM-CAT|atpE trnM-CAT-atpE 51930 52127 0 198 LSC 0.005051 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 atpE gene atpE atpE 52128 52529 -1 402 LSC 0.000000 0 0 35 300 no 0.000000 1 0.000000 NA 1.000000 23.500000 atpB gene atpB atpB 52526 54010 -1 1485 LSC 0.001347 2 0 300 91 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_046 igs atpB|rbcL atpB-rbcL 54011 54756 0 746 LSC 0.004021 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.100000 rbcL gene rbcL rbcL 54757 56214 1 1458 LSC 0.002743 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.300000 IGS_047 igs rbcL|accD rbcL-accD 56215 56699 0 485 LSC 0.002075 1 3 28 299 no 1.000000 2 1.000000 NA 0.993814 45.200000 accD gene accD accD 56700 58202 1 1503 LSC 0.004657 7 0 172 196 no 1.000000 2 1.000000 NA 1.000000 59.300000 IGS_048 igs accD|psaI accD-psaI 58203 58681 0 479 LSC 0.004301 2 14 20 300 no 1.000000 2 1.000000 NA 0.970772 48.000000 psaI gene psaI psaI 58682 58792 1 111 LSC 0.000000 0 0 67 300 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_049 igs psaI|ycf4 psaI-ycf4 58793 59165 0 373 LSC 0.000000 0 0 178 300 no 0.000000 1 0.000000 NA 1.000000 33.600000 ycf4 gene ycf4 ycf4 59166 59720 1 555 LSC 0.000000 0 0 300 153 no 0.000000 1 0.000000 NA 1.000000 35.500000 IGS_050 igs ycf4|cemA ycf4-cemA 59721 59987 0 267 LSC 0.003745 1 0 300 39 no 1.000000 2 1.000000 NA 1.000000 42.600000 cemA gene cemA cemA 59988 60677 1 690 LSC 0.001449 1 0 113 234 no 1.000000 2 1.000000 NA 1.000000 53.100000 IGS_051 igs cemA|petA cemA-petA 60678 60912 0 235 LSC 0.004367 1 6 300 300 no 1.000000 2 1.000000 NA 0.974468 57.500000 petA gene petA petA 60913 61875 1 963 LSC 0.003115 3 0 0 46 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_052 igs petA|psbJ petA-psbJ 61876 62626 0 751 LSC 0.016086 12 5 75 300 no 1.000000 2 1.000000 NA 0.993342 59.300000 psbJ gene psbJ psbJ 62627 62749 -1 123 LSC 0.000000 0 0 112 300 no 0.000000 1 0.000000 NA 1.000000 27.200000 IGS_053 igs psbJ|psbL psbJ-psbL 62750 62897 0 148 LSC 0.000000 0 0 235 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbL gene psbL psbL 62898 63014 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_054 igs psbL|psbF psbL-psbF 63015 63036 0 22 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbF gene psbF psbF 63037 63156 -1 120 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_055 igs psbF|psbE psbF-psbE 63157 63165 0 9 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 63166 63417 -1 252 LSC 0.000000 0 0 300 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_056 igs psbE|petL psbE-petL 63418 64653 0 1236 LSC 0.002441 3 7 300 300 no 1.000000 2 1.000000 NA 0.994337 60.700000 petL gene petL petL 64654 64749 1 96 LSC 0.000000 0 0 300 287 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_057 igs petL|petG petL-petG 64750 64914 0 165 LSC 0.000000 0 0 300 122 no 0.000000 1 0.000000 NA 1.000000 27.900000 petG gene petG petG 64915 65028 1 114 LSC 0.000000 0 0 300 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_058 igs petG|trnW-CCA petG-trnW-CCA 65029 65145 0 117 LSC 0.017094 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 62.300000 trnW-CCA tRNA trnW-CCA trnW-CCA 65146 65219 -1 74 LSC 0.000000 0 0 95 300 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_059 igs trnW-CCA|trnP-TGG trnW-CCA-trnP-TGG 65220 65402 0 183 LSC 0.000000 0 0 169 300 no 0.000000 1 0.000000 NA 1.000000 31.400000 trnP-TGG tRNA trnP-TGG trnP-TGG 65403 65476 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_060 igs trnP-TGG|psaJ trnP-TGG-psaJ 65477 65784 0 308 LSC 0.000000 0 0 300 108 no 0.000000 1 0.000000 NA 1.000000 27.000000 psaJ gene psaJ psaJ 65785 65919 1 135 LSC 0.007407 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_061 igs psaJ|rpl33 psaJ-rpl33 65920 66358 0 439 LSC 0.004556 2 0 26 300 no 1.000000 2 1.000000 NA 1.000000 45.000000 rpl33 gene rpl33 rpl33 66359 66559 1 201 LSC 0.000000 0 0 85 129 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_062 igs rpl33|rps18 rpl33-rps18 66560 66734 0 175 LSC 0.005714 1 0 286 251 no 1.000000 2 1.000000 NA 1.000000 55.800000 rps18 gene rps18 rps18 66735 67040 1 306 LSC 0.003268 1 0 45 202 no 1.000000 2 1.000000 NA 1.000000 42.900000 IGS_063 igs rps18|rpl20 rps18-rpl20 67041 67305 0 265 LSC 0.037736 10 0 54 216 no 1.000000 2 1.000000 NA 1.000000 63.200000 rpl20 gene rpl20 rpl20 67306 67686 -1 381 LSC 0.002625 1 0 31 71 no 1.000000 2 1.000000 NA 1.000000 43.000000 IGS_064 igs rpl20|rps12 rpl20-rps12 67687 68412 0 726 LSC 0.002755 2 0 164 300 no 1.000000 2 1.000000 NA 1.000000 57.600000 rps12_part1 gene rps12 rps12 68413 68526 -1 114 LSC 0.000000 0 0 220 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_065 igs rps12|clpP rps12-clpP 68527 68674 0 148 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 clpP gene clpP clpP 68675 70675 -1 2001 LSC 0.002999 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 IGS_066 igs clpP|psbB clpP-psbB 70676 71123 0 448 LSC 0.000000 0 0 217 300 no 0.000000 1 0.000000 NA 1.000000 36.800000 psbB gene psbB psbB 71124 72650 1 1527 LSC 0.000655 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_067 igs psbB|psbT psbB-psbT 72651 72839 0 189 LSC 0.000000 0 2 300 300 no 1.000000 2 1.000000 NA 0.989418 53.500000 psbT gene psbT psbT 72840 72941 1 102 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_068 igs psbT|psbN psbT-psbN 72942 73016 0 75 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 73017 73148 -1 132 LSC 0.000000 0 0 300 237 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_069 igs psbN|psbH psbN-psbH 73149 73250 0 102 LSC 0.000000 0 0 300 135 no 0.000000 1 0.000000 NA 1.000000 28.900000 psbH gene psbH psbH 73251 73472 1 222 LSC 0.004505 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_070 igs psbH|petB psbH-petB 73473 73596 0 124 LSC 0.000000 0 0 86 300 no 0.000000 1 0.000000 NA 1.000000 25.200000 petB gene petB petB 73597 74997 1 1401 LSC 0.000714 1 1 210 300 no 1.000000 2 1.000000 NA 0.999286 59.200000 IGS_071 igs petB|petD petB-petD 74998 75870 0 873 LSC 0.002317 2 10 123 197 no 1.000000 2 1.000000 NA 0.988545 55.400000 petD gene petD petD 75871 76353 1 483 LSC 0.002070 1 0 99 275 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_072 igs petD|rpoA petD-rpoA 76354 76563 0 210 LSC 0.000000 0 16 285 65 no 1.000000 2 1.000000 NA 0.923810 46.500000 rpoA gene rpoA rpoA 76564 77571 -1 1008 LSC 0.001984 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.900000 IGS_073 igs rpoA|rps11 rpoA-rps11 77572 77642 0 71 LSC 0.000000 0 0 185 300 no 0.000000 1 0.000000 NA 1.000000 32.600000 rps11 gene rps11 rps11 77643 78053 -1 411 LSC 0.002433 1 0 256 95 no 1.000000 2 1.000000 NA 1.000000 48.300000 IGS_074 igs rps11|rpl36 rps11-rpl36 78054 78153 0 100 LSC 0.010000 1 0 77 300 no 1.000000 2 1.000000 NA 1.000000 49.000000 rpl36 gene rpl36 rpl36 78154 78267 -1 114 LSC 0.000000 0 0 4 205 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_075 igs rpl36|infA rpl36-infA 78268 78373 0 106 LSC 0.000000 0 0 118 99 no 0.000000 1 0.000000 NA 1.000000 26.200000 infA gene infA infA 78374 78607 -1 234 LSC 0.008547 2 0 224 262 no 1.000000 2 1.000000 NA 1.000000 57.400000 IGS_076 igs infA|rps8 infA-rps8 78608 78728 0 121 LSC 0.000000 0 0 81 141 no 0.000000 1 0.000000 NA 1.000000 24.800000 rps8 gene rps8 rps8 78729 79133 -1 405 LSC 0.009877 4 0 202 300 no 1.000000 2 1.000000 NA 1.000000 60.400000 IGS_077 igs rps8|rpl14 rps8-rpl14 79134 79318 0 185 LSC 0.000000 0 5 169 300 no 1.000000 2 1.000000 NA 0.972973 52.800000 rpl14 gene rpl14 rpl14 79319 79687 -1 369 LSC 0.000000 0 0 300 18 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_078 igs rpl14|rpl16 rpl14-rpl16 79688 79802 0 115 LSC 0.026087 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 67.500000 rpl16 gene rpl16 rpl16 79803 80213 -1 411 LSC 0.000000 0 0 14 38 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_079 igs rpl16|rps3 rpl16-rps3 80214 81400 0 1187 LSC 0.011976 14 18 300 300 no 1.000000 2 1.000000 NA 0.984836 67.100000 rps3 gene rps3 rps3 81401 82057 -1 657 LSC 0.003044 2 0 72 300 no 1.000000 2 1.000000 NA 1.000000 50.900000 rpl22 gene rpl22 rpl22 82042 82509 -1 468 LSC 0.000000 0 0 32 66 no 0.000000 1 0.000000 NA 1.000000 24.600000 IGS_081 igs rpl22|rps19 rpl22-rps19 82510 82607 0 98 LSC 0.030612 3 0 300 39 no 1.000000 2 1.000000 NA 1.000000 58.000000 rps19 gene rps19 rps19 82608 82886 -1 279 LSC 0.003584 1 0 26 300 no 1.000000 2 1.000000 NA 1.000000 41.500000 IGS_082 igs rps19|rpl2 rps19-rpl2 82887 82941 0 55 IRb 0.000000 0 6 239 300 no 1.000000 2 1.000000 NA 0.890909 55.700000 rpl2 gene rpl2 rpl2 82942 84431 -1 1490 IRb 0.000671 1 0 294 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_083 igs rpl2|rpl23 rpl2-rpl23 84432 84449 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 84450 84731 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_084 igs rpl23|trnI-CAT rpl23-trnI-CAT 84732 84896 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAT tRNA trnI-CAT trnI-CAT 84897 84970 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_085 igs trnI-CAT|ycf2 trnI-CAT-ycf2 84971 85081 0 111 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 85082 91930 1 6849 IRb 0.000876 6 0 300 209 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_086 igs ycf2|trnL-CAA ycf2-trnL-CAA 91931 92336 0 406 IRb 0.002463 1 0 5 300 no 1.000000 2 1.000000 NA 1.000000 41.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 92337 92417 -1 81 IRb 0.000000 0 0 196 300 no 0.000000 1 0.000000 NA 1.000000 33.500000 IGS_087 igs trnL-CAA|ndhB trnL-CAA-ndhB 92418 92979 0 562 IRb 0.000000 0 0 277 300 no 0.000000 1 0.000000 NA 1.000000 39.200000 ndhB gene ndhB ndhB 92980 95182 -1 2203 IRb 0.000454 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_088 igs ndhB|rps7 ndhB-rps7 95183 95477 0 295 IRb 0.000000 0 0 258 203 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 95478 95945 -1 468 IRb 0.002137 1 0 300 24 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_089 igs rps7|rps12 rps7-rps12 95946 96548 0 603 IRb 0.001658 1 0 264 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 rps12_part2 gene rps12 rps12 96549 96791 -1 243 IRb 0.000000 0 0 300 243 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_090 igs rps12|ycf15 rps12-ycf15 96792 97747 0 956 IRb 0.001046 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 ycf15 gene ycf15 ycf15 97748 97939 -1 192 IRb 0.000000 0 0 300 266 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_091 igs ycf15|trnV-GAC ycf15-trnV-GAC 97940 98623 0 684 IRb 0.002924 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 98624 98695 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_092 igs trnV-GAC|rrn16 trnV-GAC-rrn16 98696 98730 0 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 98731 100220 1 1490 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_093 igs rrn16|trnI-GAU rrn16-trnI-GAU 100221 100705 0 485 IRb 0.002062 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 100706 100748 1 43 IRb 0.000000 0 0 49 300 no 0.000000 1 0.000000 NA 1.000000 22.400000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 101524 101558 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_096 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 101559 101622 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 101623 101660 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 102473 102507 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_099 igs trnA-UGC|rrn23 trnA-UGC-rrn23 102508 102659 0 152 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 102660 105469 1 2810 IRb 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_100 igs rrn23|rrn4.5 rrn23-rrn4.5 105470 105478 0 9 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 105479 105568 1 90 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_101 igs rrn4.5|rrn5 rrn4.5-rrn5 105569 105724 0 156 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 105725 105845 1 121 IRb 0.000000 0 0 300 249 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_102 igs rrn5|trnR-ACG rrn5-trnR-ACG 105846 106282 0 437 IRb 0.016055 7 1 300 300 no 1.000000 2 1.000000 NA 0.997712 64.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 106283 106356 1 74 IRb 0.000000 0 0 134 300 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_103 igs trnR-ACG|trnN-GTT trnR-ACG-trnN-GTT 106357 106829 0 473 IRb 0.002114 1 0 208 4 no 1.000000 2 1.000000 NA 1.000000 42.600000 trnN-GTT tRNA trnN-GTT trnN-GTT 106830 106901 -1 72 IRb 0.027778 2 0 63 300 no 1.000000 2 1.000000 NA 1.000000 58.200000 IGS_104 igs trnN-GTT|ycf1 trnN-GTT-ycf1 106902 107228 0 327 IRb 0.000000 0 0 55 300 no 0.000000 1 0.000000 NA 1.000000 23.400000 ycf1 gene ycf1 ycf1 107229 112244 1 5016 SSC 0.384384 1664 687 300 2 no 1.000000 2 1.000000 NA 0.863038 75.000000 IGS_105 igs ycf1|rps15 ycf1-rps15 112245 112644 0 400 SSC 0.511834 173 62 0 2 yes 1.000000 2 1.000000 NA 0.845000 76.500000 rps15 gene rps15 rps15 112645 112923 1 279 SSC 0.464419 124 12 4 2 yes 1.000000 2 1.000000 NA 0.956989 76.800000 IGS_106 igs rps15|ndhH rps15-ndhH 112924 113014 0 91 SSC 0.541176 46 6 2 0 yes 1.000000 2 1.000000 NA 0.934066 76.900000 ndhH gene ndhH ndhH 113015 114196 1 1182 SSC 0.466165 496 118 5 1 yes 1.000000 2 1.000000 NA 0.900169 82.300000 IGS_107 igs ndhH|ndhA ndhH-ndhA 114197 114203 0 7 SSC 0.571429 4 0 3 2 no 1.000000 2 1.000000 NA 1.000000 72.600000 ndhA gene ndhA ndhA 114204 116358 1 2155 SSC 0.481620 904 278 0 3 yes 1.000000 2 1.000000 NA 0.870998 80.000000 IGS_108 igs ndhA|ndhI ndhA-ndhI 116359 116434 0 76 SSC 0.500000 32 12 3 0 no 1.000000 2 1.000000 NA 0.842105 74.300000 ndhI gene ndhI ndhI 116435 116935 1 501 SSC 0.501071 234 34 1 3 yes 1.000000 2 1.000000 NA 0.932136 81.100000 IGS_109 igs ndhI|ndhG ndhI-ndhG 116936 117293 0 358 SSC 0.455840 160 7 4 0 no 1.000000 2 1.000000 NA 0.980447 75.600000 ndhG gene ndhG ndhG 117294 117824 1 531 SSC 0.486076 192 136 4 1 yes 1.000000 2 1.000000 NA 0.743879 76.400000 IGS_110 igs ndhG|ndhE ndhG-ndhE 117825 118033 0 209 SSC 0.448276 52 93 1 1 no 1.000000 2 1.000000 NA 0.555024 67.000000 ndhE gene ndhE ndhE 118034 118339 1 306 SSC 0.473029 114 65 1 2 no 1.000000 2 1.000000 NA 0.787582 73.000000 IGS_111 igs ndhE|psaC ndhE-psaC 118340 118571 0 232 SSC 0.449761 94 23 0 19 no 1.000000 2 1.000000 NA 0.900862 76.000000 psaC gene psaC psaC 118572 118817 1 246 SSC 0.500000 97 52 2 1 no 1.000000 2 1.000000 NA 0.788618 72.900000 IGS_112 igs psaC|ndhD psaC-ndhD 118818 118897 0 80 SSC 0.447761 30 13 2 1 no 1.000000 2 1.000000 NA 0.837500 74.300000 ndhD gene ndhD ndhD 118898 120436 1 1539 SSC 0.463605 535 385 1 0 yes 1.000000 2 1.000000 NA 0.749838 77.900000 IGS_113 igs ndhD|ccsA ndhD-ccsA 120437 120638 0 202 SSC 0.508287 92 21 0 0 no 1.000000 2 1.000000 NA 0.896040 75.800000 ccsA gene ccsA ccsA 120639 121613 -1 975 SSC 0.500000 385 205 2 1 yes 1.000000 2 1.000000 NA 0.789744 79.200000 IGS_114 igs ccsA|trnL-TAG ccsA-trnL-TAG 121614 121719 0 106 SSC 0.469880 39 23 65 1 no 1.000000 2 1.000000 NA 0.783019 72.700000 trnL-TAG tRNA trnL-TAG trnL-TAG 121720 121799 -1 80 SSC 0.600000 30 30 0 17 no 1.000000 2 1.000000 NA 0.625000 68.200000 IGS_115 igs trnL-TAG|rpl32 trnL-TAG-rpl32 121800 122686 0 887 SSC 0.422311 318 134 30 2 yes 1.000000 2 1.000000 NA 0.848929 80.900000 rpl32 gene rpl32 rpl32 122687 122851 -1 165 SSC 0.466216 69 17 6 13 yes 1.000000 2 1.000000 NA 0.896970 76.300000 IGS_116 igs rpl32|ndhF rpl32-ndhF 122852 123838 0 987 SSC 0.446290 403 84 16 0 yes 1.000000 2 1.000000 NA 0.914894 82.600000 ndhF gene ndhF ndhF 123839 126070 1 2232 SSC 0.446643 745 564 0 2 yes 1.000000 2 1.000000 NA 0.747312 76.400000 IGS_117 igs ndhF|trnN-GTT ndhF-trnN-GTT 126071 127005 0 935 IRa 0.029947 28 0 1 55 no 1.000000 2 1.000000 NA 1.000000 61.000000 trnN-GTT tRNA trnN-GTT trnN-GTT 127006 127077 1 72 IRa 0.027778 2 0 300 63 no 1.000000 2 1.000000 NA 1.000000 58.200000 IGS_118 igs trnN-GTT|trnR-ACG trnN-GTT-trnR-ACG 127078 127550 0 473 IRa 0.002114 1 0 4 208 no 1.000000 2 1.000000 NA 1.000000 42.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 127551 127624 -1 74 IRa 0.000000 0 0 300 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_119 igs trnR-ACG|rrn5 trnR-ACG-rrn5 127625 127679 0 55 IRa 0.000000 0 0 300 79 no 0.000000 1 0.000000 NA 1.000000 24.700000 rrn5 rRNA rrn5 rrn5 127680 127800 -1 121 IRa 0.033058 4 0 300 4 no 1.000000 2 1.000000 NA 1.000000 56.800000 IGS_120 igs rrn5|rrn4.5 rrn5-rrn4.5 127801 128045 0 245 IRa 0.012295 3 1 19 300 no 1.000000 2 1.000000 NA 0.995918 46.400000 rrn4.5 rRNA rrn4.5 rrn4.5 128046 128148 -1 103 IRa 0.000000 0 0 233 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_121 igs rrn4.5|rrn23 rrn4.5-rrn23 128149 128246 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 128247 131056 -1 2810 IRa 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_122 igs rrn23|trnA-UGC rrn23-trnA-UGC 131057 131399 0 343 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 131400 131434 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 132247 132282 -1 36 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_125 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 132283 132348 0 66 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 132349 132383 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 133159 133201 -1 43 IRa 0.000000 0 0 300 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_128 igs trnI-GAU|rrn16 trnI-GAU-rrn16 133202 133303 0 102 IRa 0.009804 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 rrn16 rRNA rrn16 rrn16 133304 134793 -1 1490 IRa 0.000000 0 0 52 300 no 0.000000 1 0.000000 NA 1.000000 28.900000 IGS_129 igs rrn16|trnV-GAC rrn16-trnV-GAC 134794 135211 0 418 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 36.200000 trnV-GAC tRNA trnV-GAC trnV-GAC 135212 135283 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_130 igs trnV-GAC|ycf15 trnV-GAC-ycf15 135284 135967 0 684 IRa 0.002924 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.400000 ycf15 gene ycf15 ycf15 135968 136159 1 192 IRa 0.000000 0 0 266 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_131 igs ycf15|rps12 ycf15-rps12 136160 137115 0 956 IRa 0.001046 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 rps12_part2 gene rps12 rps12 137116 137358 1 243 IRa 0.000000 0 0 243 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_132 igs rps12|rps7 rps12-rps7 137359 137961 0 603 IRa 0.001658 1 0 300 264 no 1.000000 2 1.000000 NA 1.000000 59.700000 rps7 gene rps7 rps7 137962 138429 1 468 IRa 0.002137 1 0 24 300 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_133 igs rps7|ndhB rps7-ndhB 138430 138724 0 295 IRa 0.000000 0 0 203 258 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhB gene ndhB ndhB 138725 140927 1 2203 IRa 0.000454 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_134 igs ndhB|trnL-CAA ndhB-trnL-CAA 140928 141489 0 562 IRa 0.000000 0 0 300 277 no 0.000000 1 0.000000 NA 1.000000 39.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 141490 141570 1 81 IRa 0.000000 0 0 300 196 no 0.000000 1 0.000000 NA 1.000000 33.500000 IGS_135 igs trnL-CAA|ycf2 trnL-CAA-ycf2 141571 141976 0 406 IRa 0.002463 1 0 300 5 no 1.000000 2 1.000000 NA 1.000000 41.500000 ycf2 gene ycf2 ycf2 141977 148825 -1 6849 IRa 0.000876 6 0 209 300 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_136 igs ycf2|trnI-CAT ycf2-trnI-CAT 148826 148936 0 111 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAT tRNA trnI-CAT trnI-CAT 148937 149010 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs trnI-CAT|rpl23 trnI-CAT-rpl23 149011 149175 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 149176 149457 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_138 igs rpl23|rpl2 rpl23-rpl2 149458 149475 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 149476 150965 1 1490 IRa 0.000671 1 0 300 252 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_139 igs rpl2|trnH-GTG rpl2-trnH-GTG 150966 151089 0 124 IRa 0.000000 7440 3415 300 128 no 1.000000 2 1.000000 NA 0.977416 65.200000