primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA_p1 psbA 1 ACTTTCAATAACTGGTAAACACT ATAGAGACTGCGTGTGCTTG 23 20 30.4 50.0 54.1 58.0 0.0 0.0 6.863596 296 1357 1161-1161 1.000000 40.3 psbA_p2 psbA 2 ACACTACTACTAAATAAGACGGA ATAGAGACTGCGTGTGCTTG 23 20 34.8 50.0 54.1 58.0 0.0 0.0 6.915573 296 1357 1143-1143 1.000000 40.3 psbA_p3 psbA 3 ACACTACTACTAAATAAGACGGAAG ATAGAGACTGCGTGTGCTTG 25 20 36.0 50.0 55.9 58.0 0.0 0.0 7.059664 296 1357 1143-1143 1.000000 40.3 psbA_p4 psbA 4 AACACTACTACTAAATAAGACGGA ATAGAGACTGCGTGTGCTTG 24 20 33.3 50.0 54.8 58.0 0.0 0.0 7.153478 296 1357 1144-1144 1.000000 40.3 psbA_p5 psbA 5 ACACTACTACTAAATAAGACGGAA ATAGAGACTGCGTGTGCTTG 24 20 33.3 50.0 54.8 58.0 0.0 0.0 7.153478 296 1357 1143-1143 1.000000 40.3 trnK(UUU)_p1 trnK(UUU) 1 AATGGCTTGTGAATGACGGA AGAGTTCTTGCTAGTTCATGT 20 21 45.0 38.1 57.8 54.6 0.0 0.0 4.610654 1596 4213 2706-2785 1.000000 46.6 trnK(UUU)_p2 trnK(UUU) 2 ATGGCTTGTGAATGACGGAA AGAGTTCTTGCTAGTTCATGT 20 21 45.0 38.1 57.8 54.6 0.0 0.0 4.610654 1596 4213 2705-2784 1.000000 46.6 trnK(UUU)_p3 trnK(UUU) 3 AATGGCTTGTGAATGACGGA AGTAGAGTTCTTGCTAGTTCATGT 20 24 45.0 37.5 57.8 57.4 0.0 0.0 4.796659 1596 4213 2709-2788 1.000000 45.1 trnK(UUU)_p4 trnK(UUU) 4 ATGGCTTGTGAATGACGGAA AGTAGAGTTCTTGCTAGTTCATGT 20 24 45.0 37.5 57.8 57.4 0.0 0.0 4.796659 1596 4213 2708-2787 1.000000 45.1 trnK(UUU)_p5 trnK(UUU) 5 ATGGCTTGTGAATGACGGAA AGAGTTCTTGCTAGTTCATGTT 20 22 45.0 36.4 57.8 55.4 0.0 0.0 4.804577 1596 4213 2705-2784 1.000000 45.0 matK-trnK(UUU)_p1 matK-trnK(UUU) 1 TGTTGCCGATATCTATCTCGT AACGGTAGAGTACTCGGCTT 21 20 42.9 50.0 56.4 58.2 0.3 17.1 2.730453 3470 4176 775-778 0.666667 46.7 matK-trnK(UUU)_p2 matK-trnK(UUU) 2 TGTTGCCGATATCTATCTCGT ACGGTAGAGTACTCGGCTTT 21 20 42.9 50.0 56.4 58.2 0.3 17.1 2.730453 3470 4176 774-777 0.666667 46.7 matK-trnK(UUU)_p3 matK-trnK(UUU) 3 TGTTGCCGATATCTATCTCGTT AACGGTAGAGTACTCGGCTT 22 20 40.9 50.0 57.2 58.2 0.3 17.1 3.016982 3470 4176 775-778 0.666667 44.4 matK-trnK(UUU)_p4 matK-trnK(UUU) 4 TGTTGCCGATATCTATCTCGTT ACGGTAGAGTACTCGGCTTT 22 20 40.9 50.0 57.2 58.2 0.3 17.1 3.016982 3470 4176 774-777 0.666667 44.4 matK-trnK(UUU)_p5 matK-trnK(UUU) 5 TGTTGCCGATATCTATCTCGT GGGTTGCTAACTCAACGGTA 21 20 42.9 50.0 56.4 57.5 0.3 0.0 3.022791 3470 4176 788-791 0.666667 44.3 rps16-trnQ(UUG)_p1 rps16-trnQ(UUG) 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5904 7697 1832-1867 1.000000 84.3 rps16-trnQ(UUG)_p2 rps16-trnQ(UUG) 2 TGTCCTTCATTCAAGTCGCA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.5 58.1 0.0 16.9 0.618121 5904 7697 1844-1879 1.000000 81.0 rps16-trnQ(UUG)_p3 rps16-trnQ(UUG) 3 TCCTTCATTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.6 58.1 0.0 16.9 0.647653 5904 7697 1842-1877 1.000000 80.8 rps16-trnQ(UUG)_p4 rps16-trnQ(UUG) 4 TTCATTCAAGTCGCACGTTG GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.3 58.1 0.0 16.9 0.737605 5904 7697 1839-1874 1.000000 80.1 rps16-trnQ(UUG)_p5 rps16-trnQ(UUG) 5 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 5904 7697 1836-1871 1.000000 79.5 psbM-trnD(GUC)_p1 psbM-trnD(GUC) 1 AGAATGAACAGTGCAGTAGC TTCAATTGGTCAGAGCACCG 20 20 45.0 50.0 55.8 58.5 0.0 5.4 2.706630 29039 29764 798-841 1.000000 65.4 psbM-trnD(GUC)_p2 psbM-trnD(GUC) 2 TGGAACTAGAATGAACAGTGCA TTCAATTGGTCAGAGCACCG 22 20 40.9 50.0 57.6 58.5 0.0 5.4 2.827699 29039 29764 805-848 1.000000 64.4 psbM-trnD(GUC)_p3 psbM-trnD(GUC) 3 AGAATGAACAGTGCAGTAGC GTTCAATTGGTCAGAGCACC 20 20 45.0 50.0 55.8 57.0 0.0 5.4 3.226784 29039 29764 799-842 1.000000 61.2 psbM-trnD(GUC)_p4 psbM-trnD(GUC) 4 TGGAACTAGAATGAACAGTGCA GTTCAATTGGTCAGAGCACC 22 20 40.9 50.0 57.6 57.0 0.0 5.4 3.347853 29039 29764 806-849 1.000000 60.2 psbM-trnD(GUC)_p5 psbM-trnD(GUC) 5 GGAACTAGAATGAACAGTGCAG TTCAATTGGTCAGAGCACCG 22 20 45.5 50.0 57.1 58.5 0.0 5.4 3.413216 29039 29764 804-847 1.000000 59.7 trnD(GUC)-trnY(GUA)_p1 trnD(GUC)-trnY(GUA) 1 ATGATTGGATTCGTCGGGAC GCAATACGTCTACGCTGGTT 20 20 50.0 50.0 57.8 58.4 0.0 1.7 0.603505 29839 30185 420-473 1.000000 85.0 trnD(GUC)-trnY(GUA)_p2 trnD(GUC)-trnY(GUA) 2 ATGATTGGATTCGTCGGGAC GTTGGCAATACGTCTACGCT 20 20 50.0 50.0 57.8 58.4 0.0 1.9 0.603505 29839 30185 424-477 1.000000 84.9 trnD(GUC)-trnY(GUA)_p3 trnD(GUC)-trnY(GUA) 3 ATGATTGGATTCGTCGGGAC TTGGCAATACGTCTACGCTG 20 20 50.0 50.0 57.8 58.4 0.0 1.7 0.604649 29839 30185 423-476 1.000000 84.9 trnD(GUC)-trnY(GUA)_p4 trnD(GUC)-trnY(GUA) 4 ATGATTGGATTCGTCGGGAC GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 57.8 58.4 0.0 0.0 0.591989 29839 30185 443-496 1.000000 84.8 trnD(GUC)-trnY(GUA)_p5 trnD(GUC)-trnY(GUA) 5 ATGATTGGATTCGTCGGGAC GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.615666 29839 30185 442-495 1.000000 84.6 trnT(GGU)-psbD_p1 trnT(GGU)-psbD 1 GGCGTAAGTCATCGGTTCAA GACCGGACCAACCTACAAAA 20 20 50.0 50.0 58.3 57.7 0.0 9.5 0.542072 31256 32430 1256-1316 1.000000 80.6 trnT(GGU)-psbD_p2 trnT(GGU)-psbD 2 GGCGTAAGTCATCGGTTCAA GAAAGAGCAAGAGACCGGAC 20 20 50.0 55.0 58.3 58.3 0.0 9.5 0.566813 31256 32430 1268-1328 1.000000 80.4 trnT(GGU)-psbD_p3 trnT(GGU)-psbD 3 GGCGTAAGTCATCGGTTCAA CTGCGTAACCAGTCATCCAT 20 20 50.0 50.0 58.3 57.7 0.0 0.0 0.598731 31256 32430 1224-1284 1.000000 80.2 trnT(GGU)-psbD_p4 trnT(GGU)-psbD 4 GGCGTAAGTCATCGGTTCAA AGACCGGACCAACCTACAAA 20 20 50.0 50.0 58.3 58.6 0.0 9.5 0.856056 31256 32430 1257-1317 1.000000 78.1 trnT(GGU)-psbD_p5 trnT(GGU)-psbD 5 GCCATGGTAAGGCGTAAGTC GACCGGACCAACCTACAAAA 20 20 55.0 50.0 58.7 57.7 14.7 9.5 0.962539 31256 32430 1266-1326 1.000000 77.2 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT AATTGCAGAGGCTTGGTTCA 20 20 50.0 45.0 57.9 58.0 4.1 0.0 0.115695 41401 42067 760-874 1.000000 84.0 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT ATTGCAGAGGCTTGGTTCAA 20 20 50.0 45.0 57.9 58.0 4.1 0.0 0.115695 41401 42067 759-873 1.000000 84.0 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT TGAAATTGCAGAGGCTTGGT 20 20 50.0 45.0 57.9 58.0 4.1 0.0 0.115695 41401 42067 763-877 1.000000 84.0 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT TTGCAGAGGCTTGGTTCAAT 20 20 50.0 45.0 57.9 58.0 4.1 0.0 0.115695 41401 42067 758-872 1.000000 84.0 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.156301 41401 42067 740-854 1.000000 83.7 trnT(UGU)-trnL(UAA)_p1 trnT(UGU)-trnL(UAA) 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 45777 46297 571-583 1.000000 79.9 trnT(UGU)-trnL(UAA)_p2 trnT(UGU)-trnL(UAA) 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 45777 46297 579-591 1.000000 79.3 trnT(UGU)-trnL(UAA)_p3 trnT(UGU)-trnL(UAA) 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 45777 46297 603-615 1.000000 79.0 trnT(UGU)-trnL(UAA)_p4 trnT(UGU)-trnL(UAA) 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 45777 46297 611-623 1.000000 78.4 trnT(UGU)-trnL(UAA)_p5 trnT(UGU)-trnL(UAA) 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 45777 46297 585-597 1.000000 78.0 trnF(GAA)-tRNA-Met(CAU)_p1 trnF(GAA)-tRNA-Met(CAU) 1 TGATGCTTCAGGAATGGTCG CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.105850 47347 48371 1092-1156 1.000000 84.5 trnF(GAA)-tRNA-Met(CAU)_p2 trnF(GAA)-tRNA-Met(CAU) 2 CCTCGTGTCACCAGTTCAAA CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.129325 47347 48371 1037-1101 1.000000 84.4 trnF(GAA)-tRNA-Met(CAU)_p3 trnF(GAA)-tRNA-Met(CAU) 3 AATGGTCGGGATAGCTCAGT CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.282715 47347 48371 1080-1144 1.000000 83.1 trnF(GAA)-tRNA-Met(CAU)_p4 trnF(GAA)-tRNA-Met(CAU) 4 ATGGTCGGGATAGCTCAGTT CGCCGTATGAAAGCAGTACT 20 20 50.0 50.0 58.2 58.1 0.0 0.0 0.282715 47347 48371 1079-1143 1.000000 83.1 trnF(GAA)-tRNA-Met(CAU)_p5 trnF(GAA)-tRNA-Met(CAU) 5 GAATGGTCGGGATAGCTCAG CGCCGTATGAAAGCAGTACT 20 20 55.0 50.0 57.6 58.1 0.0 0.0 0.524674 47347 48371 1081-1145 1.000000 81.2 psbE-petL_p1 psbE-petL 1 CCAACCTGCAATGAATAGGGA AGTCGTATCTTGCTCATACCA 21 21 47.6 42.9 58.0 56.3 0.0 0.0 3.745705 60540 61802 1456-1480 1.000000 51.2 psbE-petL_p2 psbE-petL 2 AGCAAAAGAACGTTCTCCTGT AGTCGTATCTTGCTCATACCA 21 21 42.9 42.9 58.1 56.3 29.8 0.0 3.809430 60540 61802 1384-1408 1.000000 50.8 psbE-petL_p3 psbE-petL 3 ACGTTCTCCTGTACTTCCAGA AGTCGTATCTTGCTCATACCA 21 21 47.6 42.9 58.1 56.3 0.0 0.0 3.855925 60540 61802 1375-1399 1.000000 50.4 psbE-petL_p4 psbE-petL 4 TCAGCAAAAGAACGTTCTCCT AGTCGTATCTTGCTCATACCA 21 21 42.9 42.9 57.8 56.3 29.8 0.0 3.922662 60540 61802 1386-1410 1.000000 49.9 psbE-petL_p5 psbE-petL 5 CGTTCTCCTGTACTTCCAGAC AGTCGTATCTTGCTCATACCA 21 21 52.4 42.9 57.8 56.3 0.0 0.0 3.947710 60540 61802 1374-1398 1.000000 49.7 rrn4.5-rrn5_p1 rrn4.5-rrn5 1 GAGACGAGCCGTTTCTCATT AGTATCGTCACCGCAGTAGA 20 20 50.0 50.0 58.0 58.0 9.8 0.0 0.036435 102658 102865 377-380 1.000000 81.0 rrn4.5-rrn5_p2 rrn4.5-rrn5 2 GAGACGAGCCGTTTCTCATT TATCGTCACCGCAGTAGAGT 20 20 50.0 50.0 58.0 58.0 9.8 0.0 0.036435 102658 102865 375-378 1.000000 81.0 rrn4.5-rrn5_p3 rrn4.5-rrn5 3 CAGCTGAGGCATCCTAACAG AGTATCGTCACCGCAGTAGA 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 102658 102865 322-325 1.000000 80.8 rrn4.5-rrn5_p4 rrn4.5-rrn5 4 CAGCTGAGGCATCCTAACAG TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 102658 102865 320-323 1.000000 80.8 rrn4.5-rrn5_p5 rrn4.5-rrn5 5 GAGACGAGCCGTTTCTCATT TCCCCTACAGTATCGTCACC 20 20 50.0 55.0 58.0 57.9 9.8 0.0 0.065301 102658 102865 385-388 1.000000 80.7 rpl32-trnL(UAG)_p1 rpl32-trnL(UAG) 1 GAGCTACTGAGGAACAACGG ACCTATTTCACCATAGCGGC 20 20 55.0 50.0 58.0 57.7 0.0 0.0 0.258448 104467 105033 1123-1134 1.000000 81.9 rpl32-trnL(UAG)_p2 rpl32-trnL(UAG) 2 AGAATCGCGCAGAACAGAAT ACCTATTTCACCATAGCGGC 20 20 45.0 50.0 58.0 57.7 8.7 0.0 0.271853 104467 105033 1324-1330 1.000000 81.4 rpl32-trnL(UAG)_p3 rpl32-trnL(UAG) 3 GAGCTACTGAGGAACAACGG GTGCGGTTATTGCGCTTAAG 20 20 55.0 50.0 58.0 58.2 0.0 9.7 0.192134 104467 105033 1614-1615 0.666667 65.7 rpl32-trnL(UAG)_p4 rpl32-trnL(UAG) 4 AGAATCGCGCAGAACAGAAT GTGCGGTTATTGCGCTTAAG 20 20 45.0 50.0 58.0 58.2 8.7 9.7 0.205539 104467 105033 1810-1811 0.666667 65.6 rpl32-trnL(UAG)_p5 rpl32-trnL(UAG) 5 TCGTATAGTGGCTCCGTTCT GTGCGGTTATTGCGCTTAAG 20 20 50.0 50.0 58.0 58.2 0.0 9.7 0.238247 104467 105033 1510-1511 0.666667 65.4 ccsA-psaC_p1 ccsA-psaC 1 CGGGCTGCATAGTTATGGTT ACGAACTGAGGACTGTGTTG 20 20 50.0 50.0 58.0 57.8 0.5 0.0 0.257750 106182 107494 1453-1459 1.000000 80.4 ccsA-psaC_p2 ccsA-psaC 2 CGGGCTGCATAGTTATGGTT CACGAACTGAGGACTGTGTT 20 20 50.0 50.0 58.0 57.8 0.5 0.0 0.257750 106182 107494 1454-1460 1.000000 80.4 ccsA-psaC_p3 ccsA-psaC 3 CGGGCTGCATAGTTATGGTT AAGAGATGTGAATCCGCCTG 20 20 50.0 50.0 58.0 57.7 0.5 0.0 0.355037 106182 107494 1428-1434 1.000000 79.7 ccsA-psaC_p4 ccsA-psaC 4 TCTATTCGAAATCGGGCTGC ACGAACTGAGGACTGTGTTG 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.359203 106182 107494 1465-1471 1.000000 79.6 ccsA-psaC_p5 ccsA-psaC 5 TCTATTCGAAATCGGGCTGC CACGAACTGAGGACTGTGTT 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.359203 106182 107494 1466-1472 1.000000 79.6 psaC-rps15_p1 psaC-rps15 1 CGTGGAGCAGAAGCAATTTG TTGGGAAAACGTCAACGACT 20 20 50.0 45.0 58.0 58.0 0.0 9.9 0.053865 107741 108707 1157-1161 1.000000 86.4 psaC-rps15_p2 psaC-rps15 2 GCTTTACATCCCTCCCAAGG TTGGGAAAACGTCAACGACT 20 20 55.0 45.0 57.9 58.0 0.0 9.9 0.085596 107741 108707 1133-1137 1.000000 86.3 psaC-rps15_p3 psaC-rps15 3 TCGTGGAGCAGAAGCAATTT TTGGGAAAACGTCAACGACT 20 20 45.0 45.0 58.1 58.0 0.0 9.9 0.130784 107741 108707 1158-1162 1.000000 85.8 psaC-rps15_p4 psaC-rps15 4 TTCGTGGAGCAGAAGCAATT TTGGGAAAACGTCAACGACT 20 20 45.0 45.0 58.1 58.0 0.0 9.9 0.130784 107741 108707 1159-1163 1.000000 85.8 psaC-rps15_p5 psaC-rps15 5 GACCCATACTGCGAGTTGTT TTGGGAAAACGTCAACGACT 20 20 50.0 45.0 57.9 58.0 0.0 9.9 0.121766 107741 108707 1261-1265 1.000000 85.3 rrn5-rrn4.5_p1 rrn5-rrn4.5 1 AGTATCGTCACCGCAGTAGA GAGACGAGCCGTTTCTCATT 20 20 50.0 50.0 58.0 58.0 0.0 9.8 0.036435 116138 116345 377-380 1.000000 81.0 rrn5-rrn4.5_p2 rrn5-rrn4.5 2 TATCGTCACCGCAGTAGAGT GAGACGAGCCGTTTCTCATT 20 20 50.0 50.0 58.0 58.0 0.0 9.8 0.036435 116138 116345 375-378 1.000000 81.0 rrn5-rrn4.5_p3 rrn5-rrn4.5 3 AGTATCGTCACCGCAGTAGA CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 116138 116345 322-325 1.000000 80.8 rrn5-rrn4.5_p4 rrn5-rrn4.5 4 TATCGTCACCGCAGTAGAGT CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 116138 116345 320-323 1.000000 80.8 rrn5-rrn4.5_p5 rrn5-rrn4.5 5 TCCCCTACAGTATCGTCACC GAGACGAGCCGTTTCTCATT 20 20 55.0 50.0 57.9 58.0 0.0 9.8 0.065301 116138 116345 385-388 1.000000 80.7