feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 56 130 -1 75 LSC 0.000000 0 0 128 43 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 131 530 0 400 LSC 0.044737 17 20 203 26 yes 1.000000 2 1.000000 NA 0.950000 71.800000 psbA gene psbA psbA 531 1592 -1 1062 LSC 0.001883 2 0 47 193 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1593 1826 0 234 LSC 0.004274 1 0 71 216 no 1.000000 2 1.000000 NA 1.000000 45.300000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1827 1861 -1 35 LSC 0.000000 0 0 40 181 no 0.000000 1 0.000000 NA 1.000000 21.800000 matK gene matK matK 2134 3657 -1 1524 LSC 0.003937 6 0 57 32 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3658 4374 0 717 LSC 0.004184 3 0 62 231 no 1.000000 2 1.000000 NA 1.000000 50.800000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4375 4411 -1 37 LSC 0.000000 0 0 300 194 no 0.000000 1 0.000000 NA 1.000000 33.300000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4412 5230 0 819 LSC 0.004890 4 1 300 300 yes 1.000000 2 1.000000 NA 0.998779 61.700000 rps16 gene rps16 rps16 5231 6345 -1 1115 LSC 0.001800 2 4 6 147 no 1.000000 2 1.000000 NA 0.996413 45.600000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6346 8245 0 1900 LSC 0.005920 11 42 300 170 no 1.000000 2 1.000000 NA 0.977895 61.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 8246 8318 -1 73 LSC 0.000000 0 0 300 97 no 0.000000 1 0.000000 NA 1.000000 26.000000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 8319 8653 0 335 LSC 0.005970 2 0 300 226 no 1.000000 2 1.000000 NA 1.000000 56.700000 psbK gene psbK psbK 8654 8833 1 180 LSC 0.000000 0 0 93 46 no 0.000000 1 0.000000 NA 1.000000 22.200000 IGS_009 igs psbK|psbI psbK-psbI 8834 9216 0 383 LSC 0.002611 1 0 273 144 no 1.000000 2 1.000000 NA 1.000000 51.500000 psbI gene psbI psbI 9217 9327 1 111 LSC 0.000000 0 1 300 33 no 1.000000 2 1.000000 NA 0.990991 40.800000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 9328 9466 0 139 LSC 0.007194 1 0 300 23 no 1.000000 2 1.000000 NA 1.000000 43.400000 trnS-GCU tRNA trnS-GCU trnS-GCU 9467 9554 -1 88 LSC 0.011364 1 0 105 0 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_011 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 9555 10350 0 796 LSC 0.003769 3 0 64 290 no 1.000000 2 1.000000 NA 1.000000 50.700000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 10351 10374 1 24 LSC 0.000000 0 0 22 266 no 0.000000 1 0.000000 NA 1.000000 20.400000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 11132 11179 1 48 LSC 0.000000 0 0 187 45 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_014 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 11180 11302 0 123 LSC 0.008130 1 0 235 259 no 1.000000 2 1.000000 NA 1.000000 57.200000 trnR-UCU tRNA trnR-UCU trnR-UCU 11303 11374 1 72 LSC 0.000000 0 0 77 187 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 11375 11486 0 112 LSC 0.000000 0 0 149 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 atpA gene atpA atpA 11487 13010 -1 1524 LSC 0.001969 3 0 261 31 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_016 igs atpA|atpF atpA-atpF 13011 13077 0 67 LSC 0.014925 1 0 300 120 no 1.000000 2 1.000000 NA 1.000000 55.100000 atpF gene atpF atpF 13078 14362 -1 1285 LSC 0.001564 2 6 35 84 no 1.000000 2 1.000000 NA 0.995331 47.700000 IGS_017 igs atpF|atpH atpF-atpH 14363 14821 0 459 LSC 0.008850 4 7 274 219 yes 1.000000 2 1.000000 NA 0.984749 62.400000 atpH gene atpH atpH 14822 15067 -1 246 LSC 0.004065 1 0 24 177 no 1.000000 2 1.000000 NA 1.000000 41.600000 IGS_018 igs atpH|atpI atpH-atpI 15068 15731 0 664 LSC 0.006024 4 0 26 300 no 1.000000 2 1.000000 NA 1.000000 49.200000 atpI gene atpI atpI 15732 16475 -1 744 LSC 0.000000 0 0 188 19 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_019 igs atpI|rps2 atpI-rps2 16476 16697 0 222 LSC 0.004505 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.100000 rps2 gene rps2 rps2 16698 17408 -1 711 LSC 0.002813 2 0 202 223 no 1.000000 2 1.000000 NA 1.000000 60.400000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 17409 17580 0 172 LSC 0.000000 0 0 119 51 no 0.000000 1 0.000000 NA 1.000000 22.600000 rpoC2 gene rpoC2 rpoC2 17581 21747 -1 4167 LSC 0.002880 12 0 291 120 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 21748 21899 0 152 LSC 0.013158 2 0 238 88 no 1.000000 2 1.000000 NA 1.000000 51.700000 rpoC1 gene rpoC1 rpoC1 21900 24669 -1 2770 LSC 0.001444 4 0 11 41 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 24670 24695 0 26 LSC 0.000000 0 0 300 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 rpoB gene rpoB rpoB 24696 27878 -1 3183 LSC 0.004398 14 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.900000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 27879 29025 0 1147 LSC 0.003487 4 0 138 121 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnC-GCA tRNA trnC-GCA trnC-GCA 29026 29106 1 81 LSC 0.000000 0 0 181 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 29107 30154 0 1048 LSC 0.005742 6 3 262 300 yes 1.000000 2 1.000000 NA 0.997137 62.300000 petN gene petN petN 30155 30244 1 90 LSC 0.000000 0 0 5 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_025 igs petN|psbM petN-psbM 30245 31310 0 1066 LSC 0.002830 3 6 95 258 no 1.000000 2 1.000000 NA 0.994371 53.000000 psbM gene psbM psbM 31311 31415 -1 105 LSC 0.000000 0 0 225 153 no 0.000000 1 0.000000 NA 1.000000 30.200000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 31416 32396 0 981 LSC 0.009278 9 11 300 182 yes 1.000000 2 1.000000 NA 0.988787 63.800000 trnD-GUC tRNA trnD-GUC trnD-GUC 32397 32470 -1 74 LSC 0.000000 0 0 213 108 no 0.000000 1 0.000000 NA 1.000000 26.900000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 32471 32782 0 312 LSC 0.009615 3 0 287 228 no 1.000000 2 1.000000 NA 1.000000 58.300000 trnY-GUA tRNA trnY-GUA trnY-GUA 32783 32866 -1 84 LSC 0.000000 0 0 119 144 no 0.000000 1 0.000000 NA 1.000000 27.700000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 32867 32920 0 54 LSC 0.000000 0 1 203 90 no 1.000000 2 1.000000 NA 0.981481 46.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 32921 32993 -1 73 LSC 0.000000 0 0 257 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 32994 33727 0 734 LSC 0.006944 5 14 300 300 yes 1.000000 2 1.000000 NA 0.980926 64.600000 trnT-GGU tRNA trnT-GGU trnT-GGU 33728 33799 1 72 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 33800 35241 0 1442 LSC 0.004161 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.100000 psbD gene psbD psbD 35242 36303 1 1062 LSC 0.000942 1 0 85 300 no 1.000000 2 1.000000 NA 1.000000 50.700000 psbC gene psbC psbC 36251 37672 1 1422 LSC 0.000703 1 0 300 91 no 1.000000 2 1.000000 NA 1.000000 51.000000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 37673 37887 0 215 LSC 0.004651 1 0 300 228 no 1.000000 2 1.000000 NA 1.000000 55.200000 trnS-UGA tRNA trnS-UGA trnS-UGA 37888 37980 -1 93 LSC 0.000000 0 0 123 135 no 0.000000 1 0.000000 NA 1.000000 28.000000 IGS_033 igs trnS-UGA|lhbA trnS-UGA-lhbA 37981 38301 0 321 LSC 0.009375 3 1 216 229 no 1.000000 2 1.000000 NA 0.996885 58.600000 lhbA gene lhbA lhbA 38302 38490 1 189 LSC 0.000000 0 0 168 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_034 igs lhbA|trnG-UCC lhbA-trnG-UCC 38491 38765 0 275 LSC 0.008097 2 28 300 209 no 1.000000 2 1.000000 NA 0.898182 60.400000 IGS_035 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 38837 38991 0 155 LSC 0.012903 2 0 298 132 no 1.000000 2 1.000000 NA 1.000000 54.800000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 38992 39065 -1 74 LSC 0.000000 0 0 15 58 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_036 igs trnfM-CAU|rps14 trnfM-CAU-rps14 39066 39219 0 154 LSC 0.012987 2 0 89 150 no 1.000000 2 1.000000 NA 1.000000 51.600000 rps14 gene rps14 rps14 39220 39522 -1 303 LSC 0.006601 2 0 44 32 no 1.000000 2 1.000000 NA 1.000000 43.800000 IGS_037 igs rps14|psaB rps14-psaB 39523 39650 0 128 LSC 0.007812 1 0 8 114 no 1.000000 2 1.000000 NA 1.000000 42.600000 psaB gene psaB psaB 39651 41855 -1 2205 LSC 0.000907 2 0 95 300 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_038 igs psaB|psaA psaB-psaA 41856 41880 0 25 LSC 0.000000 0 0 296 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 41881 44133 -1 2253 LSC 0.003107 7 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.000000 IGS_039 igs psaA|ycf3 psaA-ycf3 44134 44771 0 638 LSC 0.003135 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 ycf3 gene ycf3 ycf3 44772 46743 -1 1972 LSC 0.001524 3 3 17 168 no 1.000000 2 1.000000 NA 0.998479 45.100000 IGS_040 igs ycf3|trnS-GGA ycf3-trnS-GGA 46744 47552 0 809 LSC 0.006188 5 1 300 300 yes 1.000000 2 1.000000 NA 0.998764 62.400000 trnS-GGA tRNA trnS-GGA trnS-GGA 47553 47639 1 87 LSC 0.000000 0 0 76 234 no 0.000000 1 0.000000 NA 1.000000 24.400000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 47640 47919 0 280 LSC 0.010714 3 0 163 300 no 1.000000 2 1.000000 NA 1.000000 55.900000 rps4 gene rps4 rps4 47920 48525 -1 606 LSC 0.003300 2 0 5 21 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 48526 48864 0 339 LSC 0.009202 3 13 143 300 no 1.000000 2 1.000000 NA 0.961652 58.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 48865 48937 -1 73 LSC 0.000000 0 0 16 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 48938 49502 0 565 LSC 0.003704 2 25 89 250 no 1.000000 2 1.000000 NA 0.955752 56.100000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 49503 49537 1 35 LSC 0.000000 0 0 71 215 no 0.000000 1 0.000000 NA 1.000000 24.100000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 50022 50071 1 50 LSC 0.000000 0 0 268 114 no 0.000000 1 0.000000 NA 1.000000 27.300000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 50072 50418 0 347 LSC 0.005764 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 50419 50491 1 73 LSC 0.000000 0 0 62 300 no 0.000000 1 0.000000 NA 1.000000 23.400000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 50492 51040 0 549 LSC 0.001821 1 0 135 300 no 1.000000 2 1.000000 NA 1.000000 53.900000 ndhJ gene ndhJ ndhJ 51041 51517 -1 477 LSC 0.000000 0 0 134 114 no 0.000000 1 0.000000 NA 1.000000 31.000000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 51518 51616 0 99 LSC 0.000000 0 0 300 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 ndhK gene ndhK ndhK 51617 52474 -1 858 LSC 0.004662 4 0 300 92 no 1.000000 2 1.000000 NA 1.000000 53.300000 ndhC gene ndhC ndhC 52354 52716 -1 363 LSC 0.005510 2 0 26 73 no 1.000000 2 1.000000 NA 1.000000 43.900000 IGS_050 igs ndhC|trnV-UAC ndhC-trnV-UAC 52717 54575 0 1859 LSC 0.006511 12 16 116 152 no 1.000000 2 1.000000 NA 0.991393 56.300000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 54576 54612 -1 37 LSC 0.000000 0 0 300 115 no 0.000000 1 0.000000 NA 1.000000 27.400000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 55202 55240 -1 39 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_053 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 55241 55419 0 179 LSC 0.000000 0 0 300 256 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 55420 55491 1 72 LSC 0.000000 0 0 300 184 no 0.000000 1 0.000000 NA 1.000000 32.600000 IGS_054 igs trnM-CAU|atpE trnM-CAU-atpE 55492 55718 0 227 LSC 0.004405 1 0 300 273 no 1.000000 2 1.000000 NA 1.000000 55.000000 atpE gene atpE atpE 55719 56123 -1 405 LSC 0.004938 2 0 42 300 no 1.000000 2 1.000000 NA 1.000000 45.700000 atpB gene atpB atpB 56120 57616 -1 1497 LSC 0.002672 4 0 73 179 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_056 igs atpB|rbcL atpB-rbcL 57617 58370 0 754 LSC 0.005348 4 6 300 167 no 1.000000 2 1.000000 NA 0.992042 60.100000 rbcL gene rbcL rbcL 58371 59798 1 1428 LSC 0.002801 4 0 36 300 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_057 igs rbcL|accD rbcL-accD 59799 60477 0 679 LSC 0.002950 2 1 158 156 no 1.000000 2 1.000000 NA 0.998527 57.300000 accD gene accD accD 60478 61989 1 1512 LSC 0.001984 3 0 198 78 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_058 igs accD|psaI accD-psaI 61990 62589 0 600 LSC 0.011966 7 15 300 300 yes 1.000000 2 1.000000 NA 0.975000 68.000000 psaI gene psaI psaI 62590 62700 1 111 LSC 0.000000 0 0 45 300 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_059 igs psaI|ycf4 psaI-ycf4 62701 63137 0 437 LSC 0.000000 0 0 156 44 no 0.000000 1 0.000000 NA 1.000000 24.900000 ycf4 gene ycf4 ycf4 63138 63692 1 555 LSC 0.005405 3 0 300 12 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_060 igs ycf4|cemA ycf4-cemA 63693 64609 0 917 LSC 0.006572 6 4 300 300 yes 1.000000 2 1.000000 NA 0.995638 62.900000 cemA gene cemA cemA 64610 65299 1 690 LSC 0.004348 3 0 34 300 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_061 igs cemA|petA cemA-petA 65300 65521 0 222 LSC 0.000000 0 0 67 252 no 0.000000 1 0.000000 NA 1.000000 23.800000 petA gene petA petA 65522 66484 1 963 LSC 0.003115 3 0 289 202 no 1.000000 2 1.000000 NA 1.000000 60.500000 IGS_062 igs petA|psbJ petA-psbJ 66485 67617 0 1133 LSC 0.017937 20 18 153 300 yes 1.000000 2 1.000000 NA 0.984113 67.000000 psbJ gene psbJ psbJ 67618 67740 -1 123 LSC 0.000000 0 0 69 214 no 0.000000 1 0.000000 NA 1.000000 23.900000 IGS_063 igs psbJ|psbL psbJ-psbL 67741 67866 0 126 LSC 0.000000 0 0 192 88 no 0.000000 1 0.000000 NA 1.000000 25.400000 psbL gene psbL psbL 67867 67983 -1 117 LSC 0.008547 1 0 300 58 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_064 igs psbL|psbF psbL-psbF 67984 68005 0 22 LSC 0.000000 0 0 28 36 no 0.000000 1 0.000000 NA 1.000000 20.900000 psbF gene psbF psbF 68006 68125 -1 120 LSC 0.008333 1 0 50 47 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_065 igs psbF|psbE psbF-psbE 68126 68134 0 9 LSC 0.000000 0 0 83 38 no 0.000000 1 0.000000 NA 1.000000 21.600000 psbE gene psbE psbE 68135 68386 -1 252 LSC 0.003968 1 0 92 190 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_066 igs psbE|petL psbE-petL 68387 69690 0 1304 LSC 0.008723 11 43 213 92 yes 1.000000 2 1.000000 NA 0.967025 58.800000 petL gene petL petL 69691 69786 1 96 LSC 0.010417 1 0 30 48 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_067 igs petL|petG petL-petG 69787 69960 0 174 LSC 0.011494 2 0 3 56 no 1.000000 2 1.000000 NA 1.000000 44.300000 petG gene petG petG 69961 70074 1 114 LSC 0.008772 1 0 41 41 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_068 igs petG|trnW-CCA petG-trnW-CCA 70075 70193 0 119 LSC 0.008403 1 0 57 300 no 1.000000 2 1.000000 NA 1.000000 46.600000 trnW-CCA tRNA trnW-CCA trnW-CCA 70194 70267 -1 74 LSC 0.000000 0 0 77 300 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_069 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 70268 70420 0 153 LSC 0.000000 0 0 151 244 no 0.000000 1 0.000000 NA 1.000000 30.100000 trnP-UGG tRNA trnP-UGG trnP-UGG 70421 70494 -1 74 LSC 0.000000 0 0 300 170 no 0.000000 1 0.000000 NA 1.000000 31.500000 IGS_070 igs trnP-UGG|psaJ trnP-UGG-psaJ 70495 70869 0 375 LSC 0.002667 1 0 300 263 no 1.000000 2 1.000000 NA 1.000000 55.600000 psaJ gene psaJ psaJ 70870 71004 1 135 LSC 0.000000 0 0 204 128 no 0.000000 1 0.000000 NA 1.000000 28.300000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 71005 71432 0 428 LSC 0.007026 3 1 300 152 no 1.000000 2 1.000000 NA 0.997664 55.800000 rpl33 gene rpl33 rpl33 71433 71633 1 201 LSC 0.004975 1 0 210 41 no 1.000000 2 1.000000 NA 1.000000 43.400000 IGS_072 igs rpl33|rps18 rpl33-rps18 71634 71773 0 140 LSC 0.014286 2 0 48 248 no 1.000000 2 1.000000 NA 1.000000 49.300000 rps18 gene rps18 rps18 71774 72079 1 306 LSC 0.003268 1 0 11 130 no 1.000000 2 1.000000 NA 1.000000 40.300000 IGS_073 igs rps18|rpl20 rps18-rpl20 72080 72335 0 256 LSC 0.007812 2 0 57 300 no 1.000000 2 1.000000 NA 1.000000 46.300000 rpl20 gene rpl20 rpl20 72336 72689 -1 354 LSC 0.000000 0 0 8 118 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_074 igs rpl20|rps12 rpl20-rps12 72690 73444 0 755 LSC 0.003974 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 rps12_part1 gene rps12 rps12 73445 73558 -1 114 LSC 0.000000 0 0 133 300 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_075 igs rps12|clpP rps12-clpP 73559 73704 0 146 LSC 0.000000 0 0 247 292 no 0.000000 1 0.000000 NA 1.000000 33.800000 clpP gene clpP clpP 73705 75745 -1 2041 LSC 0.002458 5 7 300 14 no 1.000000 2 1.000000 NA 0.996570 45.400000 IGS_076 igs clpP|psbB clpP-psbB 75746 76173 0 428 LSC 0.009346 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.500000 psbB gene psbB psbB 76174 77700 1 1527 LSC 0.000655 1 0 80 63 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_077 igs psbB|psbT psbB-psbT 77701 77877 0 177 LSC 0.005650 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.700000 psbT gene psbT psbT 77878 77985 1 108 LSC 0.000000 0 0 113 233 no 0.000000 1 0.000000 NA 1.000000 27.200000 IGS_078 igs psbT|psbN psbT-psbN 77986 78043 0 58 LSC 0.000000 0 0 221 175 no 0.000000 1 0.000000 NA 1.000000 31.900000 psbN gene psbN psbN 78044 78175 -1 132 LSC 0.000000 0 0 279 43 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_079 igs psbN|psbH psbN-psbH 78176 78282 0 107 LSC 0.009346 1 0 300 107 no 1.000000 2 1.000000 NA 1.000000 50.900000 psbH gene psbH psbH 78283 78504 1 222 LSC 0.004505 1 0 63 1 no 1.000000 2 1.000000 NA 1.000000 40.200000 IGS_080 igs psbH|petB psbH-petB 78505 78622 0 118 LSC 0.016949 2 0 114 300 no 1.000000 2 1.000000 NA 1.000000 55.800000 petB gene petB petB 78623 80060 1 1438 LSC 0.002784 4 1 115 300 no 1.000000 2 1.000000 NA 0.999305 54.000000 IGS_081 igs petB|petD petB-petD 80061 80257 0 197 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 petD gene petD petD 80258 81461 1 1204 LSC 0.000834 1 5 300 262 no 1.000000 2 1.000000 NA 0.995847 59.600000 IGS_082 igs petD|rpoA petD-rpoA 81462 81648 0 187 LSC 0.000000 0 0 300 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 rpoA gene rpoA rpoA 81649 82668 -1 1020 LSC 0.003922 4 0 300 63 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_083 igs rpoA|rps11 rpoA-rps11 82669 82736 0 68 LSC 0.014706 1 0 236 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 rps11 gene rps11 rps11 82737 83129 -1 393 LSC 0.000000 0 0 4 26 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_084 igs rps11|rpl36 rps11-rpl36 83130 83241 0 112 LSC 0.017857 2 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 62.800000 rpl36 gene rpl36 rpl36 83242 83355 -1 114 LSC 0.000000 0 0 21 300 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_085 igs rpl36|infA rpl36-infA 83356 83470 0 115 LSC 0.000000 0 0 135 300 no 0.000000 1 0.000000 NA 1.000000 28.900000 infA gene infA infA 83471 83704 -1 234 LSC 0.000000 0 0 250 163 no 0.000000 1 0.000000 NA 1.000000 31.000000 IGS_086 igs infA|rps8 infA-rps8 83705 83820 0 116 LSC 0.000000 0 0 300 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 rps8 gene rps8 rps8 83821 84219 -1 399 LSC 0.005013 2 0 300 37 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_087 igs rps8|rpl14 rps8-rpl14 84220 84396 0 177 LSC 0.011299 2 0 223 78 no 1.000000 2 1.000000 NA 1.000000 49.800000 rpl14 gene rpl14 rpl14 84397 84765 -1 369 LSC 0.005420 2 0 51 174 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 84766 84890 0 125 LSC 0.000000 0 0 140 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 rpl16 gene rpl16 rpl16 84891 86260 -1 1370 LSC 0.003660 5 4 265 87 no 1.000000 2 1.000000 NA 0.997080 52.700000 IGS_089 igs rpl16|rps3 rpl16-rps3 86261 86408 0 148 LSC 0.006757 1 0 142 300 no 1.000000 2 1.000000 NA 1.000000 52.000000 rps3 gene rps3 rps3 86409 87071 -1 663 LSC 0.001508 1 0 60 59 no 1.000000 2 1.000000 NA 1.000000 49.000000 IGS_090 igs rps3|rps19 rps3-rps19 87072 87626 0 555 LSC 0.003604 2 0 119 300 no 1.000000 2 1.000000 NA 1.000000 53.800000 rps19 gene rps19 rps19 87627 87905 -1 279 LSC 0.000000 0 0 300 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_091 igs rps19|rpl2 rps19-rpl2 87906 87981 0 76 LSC 0.000000 0 4 300 26 no 1.000000 2 1.000000 NA 0.947368 44.200000 rpl2 gene rpl2 rpl2 87982 89481 -1 1500 LSC 0.008027 12 5 300 24 yes 1.000000 2 1.000000 NA 0.996667 50.500000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 89482 89516 0 35 LSC 0.032258 1 4 300 300 yes 1.000000 2 1.000000 NA 0.885714 73.600000 rpl23 gene rpl23 rpl23 89517 89807 -1 291 LSC 0.000000 0 0 10 89 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_093 igs rpl23|trnI-CAU rpl23-trnI-CAU 89808 89976 0 169 LSC 0.005917 1 0 300 122 no 1.000000 2 1.000000 NA 1.000000 50.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 89977 90050 -1 74 LSC 0.000000 0 0 79 48 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_094 igs trnI-CAU|ycf2 trnI-CAU-ycf2 90051 90133 0 83 LSC 0.012048 1 0 153 23 no 1.000000 2 1.000000 NA 1.000000 46.200000 ycf2 gene ycf2 ycf2 90134 96991 1 6858 LSC 0.002916 20 0 34 300 no 1.000000 2 1.000000 NA 1.000000 41.700000 IGS_095 igs ycf2|trnL-CAA ycf2-trnL-CAA 96992 97324 0 333 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 trnL-CAA tRNA trnL-CAA trnL-CAA 97325 97405 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_096 igs trnL-CAA|ndhB trnL-CAA-ndhB 97406 97965 0 560 IRb 0.000000 0 0 300 213 no 0.000000 1 0.000000 NA 1.000000 39.200000 ndhB gene ndhB ndhB 97966 100200 -1 2235 IRb 0.000447 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_097 igs ndhB|rps7 ndhB-rps7 100201 100523 0 323 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 rps7 gene rps7 rps7 100524 100991 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_098 igs rps7|rps12 rps7-rps12 100992 101049 0 58 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 101050 101843 -1 794 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_099 igs rps12|trnV-GAC rps12-trnV-GAC 101844 103658 0 1815 IRb 0.002204 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 103659 103730 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_100 igs trnV-GAC|rrn16 trnV-GAC-rrn16 103731 103958 0 228 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 103959 105449 1 1491 IRb 0.000671 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_101 igs rrn16|trnI-GAU rrn16-trnI-GAU 105450 105698 0 249 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 105699 105740 1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 106680 106714 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_104 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 106715 106778 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 106779 106816 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 107615 107649 1 35 IRb 0.000000 0 0 300 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_107 igs trnA-UGC|rrn23 trnA-UGC-rrn23 107650 107801 0 152 IRb 0.006579 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.300000 rrn23 rRNA rrn23 rrn23 107802 110605 1 2804 IRb 0.000000 0 0 121 300 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_108 igs rrn23|rrn4.5 rrn23-rrn4.5 110606 110710 0 105 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 110711 110813 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_109 igs rrn4.5|rrn5 rrn4.5-rrn5 110814 111033 0 220 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 111034 111154 1 121 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_110 igs rrn5|trnR-ACG rrn5-trnR-ACG 111155 111386 0 232 IRb 0.000000 0 0 300 217 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 111387 111460 1 74 IRb 0.000000 0 0 300 143 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_111 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 111461 112055 0 595 IRb 0.003361 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnN-GUU tRNA trnN-GUU trnN-GUU 112056 112127 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_112 igs trnN-GUU|ycf1 trnN-GUU-ycf1 112128 112504 0 377 IRb 0.000000 0 0 300 209 no 0.000000 1 0.000000 NA 1.000000 35.400000 ycf1 gene ycf1 ycf1 112505 113878 1 1374 IRb 0.003639 5 0 300 3 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_113 igs ycf1|ndhF ycf1-ndhF 113879 113901 0 23 SSC 0.086957 2 0 24 12 yes 1.000000 2 1.000000 NA 1.000000 71.800000 ndhF gene ndhF ndhF 113902 116124 -1 2223 SSC 0.005398 12 0 18 11 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_114 igs ndhF|rpl32 ndhF-rpl32 116125 117255 0 1131 SSC 0.008873 10 4 300 63 no 1.000000 2 1.000000 NA 0.996463 53.900000 rpl32 gene rpl32 rpl32 117256 117429 1 174 SSC 0.011494 2 0 235 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_115 igs rpl32|trnL-UAG rpl32-trnL-UAG 117430 118828 0 1399 SSC 0.009427 13 20 45 82 yes 1.000000 2 1.000000 NA 0.985704 53.900000 trnL-UAG tRNA trnL-UAG trnL-UAG 118829 118908 1 80 SSC 0.000000 0 0 138 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_116 igs trnL-UAG|ccsA trnL-UAG-ccsA 118909 118996 0 88 SSC 0.045977 4 1 218 278 yes 1.000000 2 1.000000 NA 0.988636 80.000000 ccsA gene ccsA ccsA 118997 119947 1 951 SSC 0.007361 7 0 15 87 yes 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_117 igs ccsA|ndhD ccsA-ndhD 119948 120180 0 233 SSC 0.021459 5 0 284 120 no 1.000000 2 1.000000 NA 1.000000 58.800000 ndhD gene ndhD ndhD 120181 121686 -1 1506 SSC 0.003984 6 0 141 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_118 igs ndhD|psaC ndhD-psaC 121687 121806 0 120 SSC 0.000000 0 0 84 255 no 0.000000 1 0.000000 NA 1.000000 25.100000 psaC gene psaC psaC 121807 122052 -1 246 SSC 0.000000 0 0 204 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_119 igs psaC|ndhE psaC-ndhE 122053 122319 0 267 SSC 0.007491 2 0 300 45 no 1.000000 2 1.000000 NA 1.000000 45.200000 ndhE gene ndhE ndhE 122320 122625 -1 306 SSC 0.009804 3 0 239 167 no 1.000000 2 1.000000 NA 1.000000 55.800000 IGS_120 igs ndhE|ndhG ndhE-ndhG 122626 122872 0 247 SSC 0.004049 1 0 134 165 no 1.000000 2 1.000000 NA 1.000000 49.900000 ndhG gene ndhG ndhG 122873 123403 -1 531 SSC 0.005650 3 0 79 300 no 1.000000 2 1.000000 NA 1.000000 51.500000 IGS_121 igs ndhG|ndhI ndhG-ndhI 123404 123734 0 331 SSC 0.000000 0 0 4 129 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhI gene ndhI ndhI 123735 124277 -1 543 SSC 0.001842 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.600000 IGS_122 igs ndhI|ndhA ndhI-ndhA 124278 124355 0 78 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhA gene ndhA ndhA 124356 126571 -1 2216 SSC 0.003159 7 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_123 igs ndhA|ndhH ndhA-ndhH 126572 126572 0 1 SSC 0.000000 0 0 206 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhH gene ndhH ndhH 126573 127754 -1 1182 SSC 0.000000 0 0 207 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_124 igs ndhH|rps15 ndhH-rps15 127755 127861 0 107 SSC 0.000000 0 0 300 282 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps15 gene rps15 rps15 127862 128128 -1 267 SSC 0.000000 0 0 300 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_125 igs rps15|ycf1 rps15-ycf1 128129 128517 0 389 SSC 0.013123 5 8 300 114 no 1.000000 2 1.000000 NA 0.979434 57.400000 ycf1 gene ycf1 ycf1 128518 134082 -1 5565 SSC 0.008805 49 0 21 300 yes 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_126 igs ycf1|trnN-GUU ycf1-trnN-GUU 134083 134459 0 377 IRa 0.000000 0 0 209 300 no 0.000000 1 0.000000 NA 1.000000 35.400000 trnN-GUU tRNA trnN-GUU trnN-GUU 134460 134531 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_127 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 134532 135126 0 595 IRa 0.003361 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 135127 135200 -1 74 IRa 0.000000 0 0 143 300 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_128 igs trnR-ACG|rrn5 trnR-ACG-rrn5 135201 135431 0 231 IRa 0.000000 0 0 217 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 135432 135552 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_129 igs rrn5|rrn4.5 rrn5-rrn4.5 135553 135773 0 221 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 135774 135876 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_130 igs rrn4.5|rrn23 rrn4.5-rrn23 135877 135974 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 135975 138778 -1 2804 IRa 0.000000 0 0 300 128 no 0.000000 1 0.000000 NA 1.000000 31.900000 IGS_131 igs rrn23|trnA-UGC rrn23-trnA-UGC 138779 138937 0 159 IRa 0.006289 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.100000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 138938 138972 -1 35 IRa 0.000000 0 0 30 300 no 0.000000 1 0.000000 NA 1.000000 21.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 139771 139808 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_134 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 139809 139872 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 139873 139907 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 140847 140888 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs trnI-GAU|rrn16 trnI-GAU-rrn16 140889 141137 0 249 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 141138 142628 -1 1491 IRa 0.000671 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_138 igs rrn16|trnV-GAC rrn16-trnV-GAC 142629 142856 0 228 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 142857 142928 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs trnV-GAC|rps12 trnV-GAC-rps12 142929 144743 0 1815 IRa 0.002204 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 rps12_part2 gene rps12 rps12 144744 145537 1 794 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_140 igs rps12|rps7 rps12-rps7 145538 145595 0 58 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 145596 146063 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_141 igs rps7|ndhB rps7-ndhB 146064 146386 0 323 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.200000 ndhB gene ndhB ndhB 146387 148621 1 2235 IRa 0.000447 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_142 igs ndhB|trnL-CAA ndhB-trnL-CAA 148622 149181 0 560 IRa 0.000000 0 0 213 300 no 0.000000 1 0.000000 NA 1.000000 39.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 149182 149262 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_143 igs trnL-CAA|ycf2 trnL-CAA-ycf2 149263 149595 0 333 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 ycf2 gene ycf2 ycf2 149596 152723 -1 3128 IRa 0.000639 2 0 300 173 no 1.000000 2 1.000000 NA 1.000000 53.800000 IGS_144 igs ycf2|trnH-GUG ycf2-trnH-GUG 152724 55 0 55 LSC 0.000000 0 52 73 118 no 1.000000 2 1.000000 NA 0.054545 31.200000