feature_id	feature_type	parent_gene	label_name	start	end	strand	length_bp	region	pi	variable_sites	indel_sites	conserved_left_bp	conserved_right_bp	primer_available	species_resolution	unique_haplotype_count	species_specific_haplotype_ratio	interspecific_divergence	alignment_reliability	markerseek_score
atpA	gene	atpA	atpA	149	1669	-1	1521	LSC	0.134473	181	175	153	12	yes	1.000000	2	1.000000	NA	0.884944	82.600000
IGS_001	igs	atpA|atpF	atpA-atpF	1670	1675	0	6	LSC	0.000000	0	0	59	6	no	0.000000	1	0.000000	NA	1.000000	19.200000
atpF	gene	atpF	atpF	1676	2215	-1	540	LSC	0.162921	87	6	65	11	no	1.000000	2	1.000000	NA	0.988889	79.400000
IGS_002	igs	atpF|atpH	atpF-atpH	2216	2318	0	103	LSC	0.333333	33	4	4	12	no	1.000000	2	1.000000	NA	0.961165	76.600000
atpH	gene	atpH	atpH	2319	2567	-1	249	LSC	0.092369	23	0	4	4	no	1.000000	2	1.000000	NA	1.000000	71.800000
IGS_003	igs	atpH|atpI	atpH-atpI	2568	2802	0	235	LSC	0.373786	77	29	23	6	no	1.000000	2	1.000000	NA	0.876596	75.700000
atpI	gene	atpI	atpI	2803	3522	-1	720	LSC	0.150000	108	0	0	2	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_004	igs	atpI|rps2	atpI-rps2	3523	3697	0	175	LSC	0.304688	39	47	30	4	no	1.000000	2	1.000000	NA	0.731429	71.500000
rps2	gene	rps2	rps2	3698	4471	-1	774	LSC	0.204134	158	0	0	0	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_005	igs	rps2|rpoC2	rps2-rpoC2	4472	4680	0	209	LSC	0.291339	37	82	11	4	no	1.000000	2	1.000000	NA	0.607656	68.000000
rpoC2	gene	rpoC2	rpoC2	4681	8403	-1	3723	LSC	0.306461	1072	225	65	0	no	1.000000	2	1.000000	NA	0.939565	79.000000
IGS_006	igs	rpoC2|rpoC1	rpoC2-rpoC1	8404	8423	0	20	LSC	0.350000	7	0	2	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
rpoC1	gene	rpoC1	rpoC1	8424	10562	-1	2139	LSC	0.244850	523	3	7	1	no	1.000000	2	1.000000	NA	0.998597	77.600000
IGS_007	igs	rpoC1|rpoB	rpoC1-rpoB	10563	10642	0	80	LSC	0.415385	27	15	3	11	no	1.000000	2	1.000000	NA	0.812500	73.700000
rpoB	gene	rpoB	rpoB	10643	14116	-1	3474	LSC	0.238305	810	75	3	8	no	1.000000	2	1.000000	NA	0.978411	77.200000
IGS_008	igs	rpoB|PrmiC_t001	rpoB-PrmiC_t001	14117	14213	0	97	LSC	0.375000	33	9	24	26	no	1.000000	2	1.000000	NA	0.907216	77.900000
PrmiC_t001	tRNA	PrmiC_t001	PrmiC_t001	14214	14284	1	71	LSC	0.056338	4	0	1	1	no	1.000000	2	1.000000	NA	1.000000	67.100000
IGS_009	igs	PrmiC_t001|clpP	PrmiC_t001-clpP	14285	14517	0	233	LSC	0.280193	58	26	3	3	no	1.000000	2	1.000000	NA	0.888412	75.800000
clpP	gene	clpP	clpP	14518	15117	-1	600	LSC	0.155000	93	0	6	6	no	1.000000	2	1.000000	NA	1.000000	79.200000
IGS_010	igs	clpP|psbB	clpP-psbB	15118	15309	0	192	LSC	0.204545	36	16	11	17	no	1.000000	2	1.000000	NA	0.916667	77.200000
psbB	gene	psbB	psbB	15310	16836	1	1527	LSC	0.147348	225	0	2	6	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_011	igs	psbB|psbT	psbB-psbT	16837	16954	0	118	LSC	0.362745	37	16	3	23	no	1.000000	2	1.000000	NA	0.864407	75.200000
psbT	gene	psbT	psbT	16955	17050	1	96	LSC	0.177083	17	0	1	2	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_012	igs	psbT|psbN	psbT-psbN	17051	17219	0	169	LSC	0.436242	65	20	3	12	no	1.000000	2	1.000000	NA	0.881657	75.600000
psbN	gene	psbN	psbN	17220	17354	-1	135	LSC	0.111111	15	0	1	2	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_013	igs	psbN|psbH	psbN-psbH	17355	17550	0	196	LSC	0.290909	48	31	23	15	no	1.000000	2	1.000000	NA	0.841837	75.400000
psbH	gene	psbH	psbH	17551	17808	1	258	LSC	0.107143	27	6	1	23	no	1.000000	2	1.000000	NA	0.976744	74.800000
IGS_014	igs	psbH|petB	psbH-petB	17809	17949	0	141	LSC	0.316327	31	43	6	3	no	1.000000	2	1.000000	NA	0.695035	70.400000
petB	gene	petB	petB	17950	18597	1	648	LSC	0.140432	91	0	3	2	no	1.000000	2	1.000000	NA	1.000000	78.900000
IGS_015	igs	petB|petD	petB-petD	18598	18735	0	138	LSC	0.341667	41	18	3	8	no	1.000000	2	1.000000	NA	0.869565	75.300000
petD	gene	petD	petD	18736	19218	1	483	LSC	0.171843	83	0	12	2	no	1.000000	2	1.000000	NA	1.000000	76.500000
IGS_016	igs	petD|rpl12	petD-rpl12	19219	19556	0	338	LSC	0.393189	127	15	21	6	no	1.000000	2	1.000000	NA	0.955621	78.000000
rpl12	gene	rpl12	rpl12	19557	19952	-1	396	LSC	0.176768	70	0	2	4	no	1.000000	2	1.000000	NA	1.000000	74.600000
IGS_017	igs	rpl12|rps9	rpl12-rps9	19953	20119	0	167	LSC	0.305085	36	49	5	0	no	1.000000	2	1.000000	NA	0.706587	70.500000
rps9	gene	rps9	rps9	20120	20500	-1	381	LSC	0.246719	94	0	0	1	no	1.000000	2	1.000000	NA	1.000000	74.200000
IGS_018	igs	rps9|rpoA	rps9-rpoA	20501	20709	0	209	LSC	0.340580	47	71	26	6	no	1.000000	2	1.000000	NA	0.660287	69.600000
rpoA	gene	rpoA	rpoA	20710	21807	-1	1098	LSC	0.336423	363	19	16	1	yes	1.000000	2	1.000000	NA	0.982696	80.500000
IGS_019	igs	rpoA|rps11	rpoA-rps11	21808	22125	0	318	LSC	0.346154	45	188	4	3	no	1.000000	2	1.000000	NA	0.408805	65.700000
rps11	gene	rps11	rps11	22126	22524	-1	399	LSC	0.150376	60	0	60	7	no	1.000000	2	1.000000	NA	1.000000	75.100000
IGS_020	igs	rps11|rpl36	rps11-rpl36	22525	22716	0	192	LSC	0.326241	46	51	8	18	no	1.000000	2	1.000000	NA	0.734375	71.900000
rpl36	gene	rpl36	rpl36	22717	22830	-1	114	LSC	0.118182	13	4	10	22	no	1.000000	2	1.000000	NA	0.964912	76.600000
IGS_021	igs	rpl36|rps8	rpl36-rps8	22831	23011	0	181	LSC	0.288462	15	129	17	8	no	1.000000	2	1.000000	NA	0.287293	62.100000
rps8	gene	rps8	rps8	23012	23401	-1	390	LSC	0.218509	85	1	0	0	no	1.000000	2	1.000000	NA	0.997436	74.600000
IGS_022	igs	rps8|rpl5	rps8-rpl5	23402	23439	0	38	LSC	0.277778	10	2	8	15	no	1.000000	2	1.000000	NA	0.947368	77.900000
rpl5	gene	rpl5	rpl5	23440	23985	-1	546	LSC	0.164835	90	0	4	3	no	1.000000	2	1.000000	NA	1.000000	77.800000
IGS_023	igs	rpl5|rpl14	rpl5-rpl14	23986	24015	0	30	LSC	0.300000	9	0	5	6	no	1.000000	2	1.000000	NA	1.000000	72.900000
rpl14	gene	rpl14	rpl14	24016	24375	-1	360	LSC	0.173669	62	3	6	63	no	1.000000	2	1.000000	NA	0.991667	75.000000
IGS_024	igs	rpl14|rpl16	rpl14-rpl16	24376	24606	0	231	LSC	0.222222	10	186	11	30	no	1.000000	2	1.000000	NA	0.194805	56.200000
rpl16	gene	rpl16	rpl16	24607	25023	-1	417	LSC	0.150246	61	11	4	1	no	1.000000	2	1.000000	NA	0.973621	77.600000
IGS_025	igs	rpl16|rps3	rpl16-rps3	25024	25081	0	58	LSC	0.362069	21	0	15	5	no	1.000000	2	1.000000	NA	1.000000	72.900000
rps3	gene	rps3	rps3	25082	25783	-1	702	LSC	0.199430	140	0	0	29	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_026	igs	rps3|rps19	rps3-rps19	25784	25899	0	116	LSC	0.432432	16	79	20	6	no	1.000000	2	1.000000	NA	0.318966	64.400000
rps19	gene	rps19	rps19	25900	26178	-1	279	LSC	0.129032	36	0	0	5	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_027	igs	rps19|rpl2	rps19-rpl2	26179	26497	0	319	LSC	0.459916	109	82	8	24	no	1.000000	2	1.000000	NA	0.742947	72.500000
rpl2	gene	rpl2	rpl2	26498	27328	-1	831	LSC	0.143204	118	7	8	3	no	1.000000	2	1.000000	NA	0.991576	79.800000
IGS_028	igs	rpl2|rpl23	rpl2-rpl23	27329	27615	0	287	LSC	0.300000	27	197	20	7	no	1.000000	2	1.000000	NA	0.313589	63.700000
rpl23	gene	rpl23	rpl23	27616	27906	-1	291	LSC	0.140351	40	6	9	4	no	1.000000	2	1.000000	NA	0.979381	74.800000
IGS_029	igs	rpl23|cemA	rpl23-cemA	27907	28064	0	158	LSC	0.356164	52	12	17	21	no	1.000000	2	1.000000	NA	0.924051	77.900000
cemA	gene	cemA	cemA	28065	29339	-1	1275	LSC	0.203470	258	7	0	5	no	1.000000	2	1.000000	NA	0.994510	79.300000
IGS_030	igs	cemA|ycf4	cemA-ycf4	29340	29411	0	72	LSC	0.333333	24	0	3	9	no	1.000000	2	1.000000	NA	1.000000	72.700000
ycf4	gene	ycf4	ycf4	29412	29996	-1	585	LSC	0.184801	107	6	0	3	no	1.000000	2	1.000000	NA	0.989744	79.400000
IGS_031	igs	ycf4|rpl19	ycf4-rpl19	29997	30434	0	438	LSC	0.362069	63	264	4	0	no	1.000000	2	1.000000	NA	0.397260	67.800000
rpl19	gene	rpl19	rpl19	30435	30797	-1	363	LSC	0.206612	75	0	58	28	no	1.000000	2	1.000000	NA	1.000000	75.900000
IGS_032	igs	rpl19|tufA	rpl19-tufA	30798	30987	0	190	LSC	0.202381	17	106	5	15	no	1.000000	2	1.000000	NA	0.442105	64.600000
tufA	gene	tufA	tufA	30988	32220	-1	1233	LSC	0.144363	178	0	32	2	no	1.000000	2	1.000000	NA	1.000000	78.900000
IGS_033	igs	tufA|rps7	tufA-rps7	32221	32403	0	183	LSC	0.398773	65	20	10	21	no	1.000000	2	1.000000	NA	0.890710	76.400000
rps7	gene	rps7	rps7	32404	32874	-1	471	LSC	0.152866	72	0	0	1	no	1.000000	2	1.000000	NA	1.000000	76.100000
IGS_034	igs	rps7|rps12	rps7-rps12	32875	33125	0	251	LSC	0.365854	15	210	5	6	no	1.000000	2	1.000000	NA	0.163347	57.400000
rps12	gene	rps12	rps12	33126	33500	-1	375	LSC	0.136000	51	0	1	3	no	1.000000	2	1.000000	NA	1.000000	74.100000
IGS_035	igs	rps12|psaJ	rps12-psaJ	33501	33656	0	156	LSC	0.339806	35	53	32	18	no	1.000000	2	1.000000	NA	0.660256	70.500000
psaJ	gene	psaJ	psaJ	33657	33782	-1	126	LSC	0.222222	28	0	18	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_036	igs	psaJ|trnP(ugg)	psaJ-trnP(ugg)	33783	34253	0	471	LSC	0.420935	189	22	1	76	yes	1.000000	2	1.000000	NA	0.953291	80.700000
trnP(ugg)	tRNA	trnP(ugg)	trnP(ugg)	34254	34327	1	74	LSC	0.000000	0	0	2	2	no	0.000000	1	0.000000	NA	1.000000	18.900000
IGS_037	igs	trnP(ugg)|trnW(cca)	trnP(ugg)-trnW(cca)	34328	34337	0	10	LSC	0.333333	2	4	76	3	no	1.000000	2	1.000000	NA	0.600000	67.700000
trnW(cca)	tRNA	trnW(cca)	trnW(cca)	34338	34410	1	73	LSC	0.082192	6	0	6	18	no	1.000000	2	1.000000	NA	1.000000	70.700000
IGS_038	igs	trnW(cca)|rps18	trnW(cca)-rps18	34411	34518	0	108	LSC	0.439560	40	17	4	0	no	1.000000	2	1.000000	NA	0.842593	74.300000
rps18	gene	rps18	rps18	34519	34758	-1	240	LSC	0.237500	57	0	1	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_039	igs	rps18|rpl20	rps18-rpl20	34759	34775	0	17	LSC	0.470588	8	0	5	2	no	1.000000	2	1.000000	NA	1.000000	72.600000
rpl20	gene	rpl20	rpl20	34776	35117	-1	342	LSC	0.160819	55	0	0	8	no	1.000000	2	1.000000	NA	1.000000	73.400000
IGS_040	igs	rpl20|trnE(uuc)	rpl20-trnE(uuc)	35118	35559	0	442	LSC	0.256881	56	224	26	5	no	1.000000	2	1.000000	NA	0.493213	69.500000
trnE(uuc)	tRNA	trnE(uuc)	trnE(uuc)	35560	35632	1	73	LSC	0.027397	2	0	8	1	no	1.000000	2	1.000000	NA	1.000000	53.300000
IGS_041	igs	trnE(uuc)|rps14	trnE(uuc)-rps14	35633	35861	0	229	LSC	0.375000	51	93	6	30	no	1.000000	2	1.000000	NA	0.593886	67.900000
rps14	gene	rps14	rps14	35862	36164	1	303	LSC	0.155116	47	0	1	5	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_042	igs	rps14|trnMf(cau)	rps14-trnMf(cau)	36165	36304	0	140	LSC	0.235714	33	0	9	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
trnMf(cau)	tRNA	trnMf(cau)	trnMf(cau)	36305	36378	1	74	LSC	0.432432	32	0	10	8	no	1.000000	2	1.000000	NA	1.000000	73.100000
IGS_043	igs	trnMf(cau)|psaB	trnMf(cau)-psaB	36379	36863	0	485	LSC	0.331959	161	0	8	15	no	1.000000	2	1.000000	NA	1.000000	77.000000
psaB	gene	psaB	psaB	36864	39068	-1	2205	LSC	0.141497	312	0	0	5	no	1.000000	2	1.000000	NA	1.000000	77.300000
IGS_044	igs	psaB|psaA	psaB-psaA	39069	39460	0	392	LSC	0.357513	69	199	8	9	no	1.000000	2	1.000000	NA	0.492347	68.700000
psaA	gene	psaA	psaA	39461	41719	-1	2259	LSC	0.125000	282	3	3	1	no	1.000000	2	1.000000	NA	0.998672	77.400000
IGS_045	igs	psaA|trnQ(uug)	psaA-trnQ(uug)	41720	42060	0	341	LSC	0.363958	103	58	5	63	no	1.000000	2	1.000000	NA	0.829912	75.200000
trnQ(uug)	tRNA	trnQ(uug)	trnQ(uug)	42061	42132	-1	72	LSC	0.013889	1	0	4	0	no	1.000000	2	1.000000	NA	1.000000	45.500000
IGS_046	igs	trnQ(uug)|psbK	trnQ(uug)-psbK	42133	42585	0	453	LSC	0.369668	156	31	8	4	no	1.000000	2	1.000000	NA	0.931567	80.300000
psbK	gene	psbK	psbK	42586	42720	1	135	LSC	0.111111	15	0	2	134	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_047	igs	psbK|ycf12	psbK-ycf12	42721	42918	0	198	LSC	0.157895	9	141	6	5	no	1.000000	2	1.000000	NA	0.287879	57.200000
ycf12	gene	ycf12	ycf12	42919	43020	1	102	LSC	0.147059	15	0	23	4	no	1.000000	2	1.000000	NA	1.000000	72.800000
IGS_048	igs	ycf12|psaM	ycf12-psaM	43021	43153	0	133	LSC	0.414634	51	10	5	23	no	1.000000	2	1.000000	NA	0.924812	77.000000
psaM	gene	psaM	psaM	43154	43249	1	96	LSC	0.187500	18	0	4	6	no	1.000000	2	1.000000	NA	1.000000	72.800000
IGS_049	igs	psaM|ycf47	psaM-ycf47	43250	43316	0	67	LSC	0.400000	16	27	3	4	no	1.000000	2	1.000000	NA	0.597015	67.700000
ycf47	gene	ycf47	ycf47	43317	43505	-1	189	LSC	0.153439	29	0	0	17	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_050	igs	ycf47|trnF(gaa)	ycf47-trnF(gaa)	43506	43586	0	81	LSC	0.357143	25	11	5	16	no	1.000000	2	1.000000	NA	0.864198	75.300000
trnF(gaa)	tRNA	trnF(gaa)	trnF(gaa)	43587	43659	1	73	LSC	0.027397	2	0	1	1	no	1.000000	2	1.000000	NA	1.000000	53.300000
IGS_051	igs	trnF(gaa)|trnK(uuu)	trnF(gaa)-trnK(uuu)	43660	43824	0	165	LSC	0.379747	60	7	14	4	no	1.000000	2	1.000000	NA	0.957576	76.900000
trnK(uuu)	tRNA	trnK(uuu)	trnK(uuu)	43825	43896	1	72	LSC	0.041667	3	0	0	1	no	1.000000	2	1.000000	NA	1.000000	61.500000
IGS_052	igs	trnK(uuu)|ftsH	trnK(uuu)-ftsH	43897	44064	0	168	LSC	0.296970	49	3	4	0	no	1.000000	2	1.000000	NA	0.982143	74.200000
ftsH	gene	ftsH	ftsH	44065	47943	-1	3879	LSC	0.302004	1115	187	4	1	no	1.000000	2	1.000000	NA	0.951792	79.000000
IGS_053	igs	ftsH|psbZ	ftsH-psbZ	47944	48215	0	272	LSC	0.327044	52	113	3	6	no	1.000000	2	1.000000	NA	0.584559	67.500000
psbZ	gene	psbZ	psbZ	48216	48404	-1	189	LSC	0.137566	26	0	0	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_054	igs	psbZ|psbJ	psbZ-psbJ	48405	48682	0	278	LSC	0.310345	72	46	27	5	no	1.000000	2	1.000000	NA	0.834532	74.500000
psbJ	gene	psbJ	psbJ	48683	48811	-1	129	LSC	0.131783	17	0	0	2	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_055	igs	psbJ|psbL	psbJ-psbL	48812	48887	0	76	LSC	0.302632	23	0	17	26	no	1.000000	2	1.000000	NA	1.000000	73.800000
psbL	gene	psbL	psbL	48888	49004	-1	117	LSC	0.102564	12	0	3	1	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_056	igs	psbL|psbF	psbL-psbF	49005	49173	0	169	LSC	0.235294	4	152	3	30	no	1.000000	2	1.000000	NA	0.100592	51.900000
psbF	gene	psbF	psbF	49174	49299	-1	126	LSC	0.111111	14	0	35	5	no	1.000000	2	1.000000	NA	1.000000	72.900000
IGS_057	igs	psbF|psbE	psbF-psbE	49300	49404	0	105	LSC	0.342857	36	0	5	3	no	1.000000	2	1.000000	NA	1.000000	72.700000
psbE	gene	psbE	psbE	49405	49650	-1	246	LSC	0.093496	23	0	1	3	no	1.000000	2	1.000000	NA	1.000000	71.800000
IGS_058	igs	psbE|trnH(gug)	psbE-trnH(gug)	49651	50032	0	382	LSC	0.341176	116	42	14	2	no	1.000000	2	1.000000	NA	0.890052	77.500000
trnH(gug)	tRNA	trnH(gug)	trnH(gug)	50033	50104	-1	72	LSC	0.125000	9	0	0	3	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_059	igs	trnH(gug)|trnT(ggu)	trnH(gug)-trnT(ggu)	50105	50171	0	67	LSC	0.409836	25	6	1	5	no	1.000000	2	1.000000	NA	0.910448	76.300000
trnT(ggu)	tRNA	trnT(ggu)	trnT(ggu)	50172	50244	-1	73	LSC	0.191781	14	0	7	0	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_060	igs	trnT(ggu)|trnR(ucu)	trnT(ggu)-trnR(ucu)	50245	50644	0	400	LSC	0.427536	118	124	4	11	no	1.000000	2	1.000000	NA	0.690000	72.400000
trnR(ucu)	tRNA	trnR(ucu)	trnR(ucu)	50645	50716	-1	72	LSC	0.555556	25	27	5	3	no	1.000000	2	1.000000	NA	0.625000	68.400000
IGS_061	igs	trnR(ucu)|trnY(gua)	trnR(ucu)-trnY(gua)	50717	50804	0	88	LSC	0.384615	20	36	21	65	no	1.000000	2	1.000000	NA	0.590909	69.000000
trnY(gua)	tRNA	trnY(gua)	trnY(gua)	50805	50886	-1	82	LSC	0.444444	8	64	29	2	no	1.000000	2	1.000000	NA	0.219512	62.600000
IGS_062	igs	trnY(gua)|accD	trnY(gua)-accD	50887	51036	0	150	LSC	0.408759	56	13	0	8	no	1.000000	2	1.000000	NA	0.913333	76.300000
accD	gene	accD	accD	51037	52182	1	1146	LSC	0.178156	199	29	1	3	yes	1.000000	2	1.000000	NA	0.974695	81.300000
IGS_063	igs	accD|cysA	accD-cysA	52183	52332	0	150	LSC	0.394495	43	41	19	8	no	1.000000	2	1.000000	NA	0.726667	71.700000
cysA	gene	cysA	cysA	52333	53415	1	1083	LSC	0.251721	256	66	1	3	yes	1.000000	2	1.000000	NA	0.939058	83.400000
trnG(ucc)	tRNA	trnG(ucc)	trnG(ucc)	53414	53484	-1	71	LSC	0.169014	12	0	2	1	no	1.000000	2	1.000000	NA	1.000000	72.600000
IGS_065	igs	trnG(ucc)|trnL(uaa)	trnG(ucc)-trnL(uaa)	53485	53838	0	354	LSC	0.333333	33	255	4	3	no	1.000000	2	1.000000	NA	0.279661	64.000000
trnL(uaa)	tRNA	trnL(uaa)	trnL(uaa)	53839	53925	1	87	LSC	0.183908	16	0	0	1	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_066	igs	trnL(uaa)|trnV(uac)	trnL(uaa)-trnV(uac)	53926	54081	0	156	LSC	0.434343	43	57	4	0	no	1.000000	2	1.000000	NA	0.634615	68.500000
trnV(uac)	tRNA	trnV(uac)	trnV(uac)	54082	54154	-1	73	LSC	0.492308	32	8	1	0	no	1.000000	2	1.000000	NA	0.890411	75.700000
IGS_067	igs	trnV(uac)|trnT(ugu)	trnV(uac)-trnT(ugu)	54155	54219	0	65	LSC	0.553846	36	0	3	1	no	1.000000	2	1.000000	NA	1.000000	72.600000
trnT(ugu)	tRNA	trnT(ugu)	trnT(ugu)	54220	54292	-1	73	LSC	0.558824	19	39	0	1	no	1.000000	2	1.000000	NA	0.465753	65.800000
IGS_068	igs	trnT(ugu)|psbI	trnT(ugu)-psbI	54293	54411	0	119	LSC	0.460177	52	6	0	0	no	1.000000	2	1.000000	NA	0.949580	77.300000
psbI	gene	psbI	psbI	54412	54528	1	117	LSC	0.410959	30	44	1	65	no	1.000000	2	1.000000	NA	0.623932	68.200000
IGS_069	igs	psbI|ycf3	psbI-ycf3	54529	54801	0	273	LSC	0.462121	61	141	34	0	no	1.000000	2	1.000000	NA	0.483516	66.000000
ycf3	gene	ycf3	ycf3	54802	55305	-1	504	LSC	0.466276	159	163	20	0	no	1.000000	2	1.000000	NA	0.676587	73.900000
IGS_070	igs	ycf3|trnR(ccg)	ycf3-trnR(ccg)	55306	55457	0	152	LSC	0.466667	56	32	31	0	no	1.000000	2	1.000000	NA	0.789474	72.800000
trnR(ccg)	tRNA	trnR(ccg)	trnR(ccg)	55458	55529	-1	72	LSC	0.440000	22	22	0	0	no	1.000000	2	1.000000	NA	0.694444	70.200000
IGS_071	igs	trnR(ccg)|orf205	trnR(ccg)-orf205	55530	56360	0	831	LSC	0.440000	275	206	4	0	no	1.000000	2	1.000000	NA	0.752106	78.000000
orf205	gene	orf205	orf205	56361	56978	-1	618	LSC	0.473002	219	155	0	25	yes	1.000000	2	1.000000	NA	0.749191	77.900000
IGS_072	igs	orf205|orf307	orf205-orf307	56979	57029	0	51	LSC	0.272727	6	29	25	53	no	1.000000	2	1.000000	NA	0.431373	67.300000
orf307	gene	orf307	orf307	57030	57953	-1	924	LSC	0.468661	329	222	8	0	no	1.000000	2	1.000000	NA	0.759740	78.200000
IGS_073	igs	orf307|orf216	orf307-orf216	57954	57959	0	6	LSC	0.333333	2	0	1	1	no	1.000000	2	1.000000	NA	1.000000	72.600000
orf216	gene	orf216	orf216	57960	58610	-1	651	LSC	0.479129	264	100	3	21	yes	1.000000	2	1.000000	NA	0.846390	80.900000
IGS_074	igs	orf216|rbcL	orf216-rbcL	58611	58951	0	341	LSC	0.424908	116	68	9	0	no	1.000000	2	1.000000	NA	0.800587	74.000000
rbcL	gene	rbcL	rbcL	58952	60379	-1	1428	LSC	0.489916	583	238	0	4	yes	1.000000	2	1.000000	NA	0.833333	80.300000
IGS_075	igs	rbcL|atpB	rbcL-atpB	60380	60737	0	358	LSC	0.449477	129	71	1	1	no	1.000000	2	1.000000	NA	0.801676	74.500000
atpB	gene	atpB	atpB	60738	62180	1	1443	LSC	0.495050	550	332	1	1	yes	1.000000	2	1.000000	NA	0.769924	78.600000
IGS_076	igs	atpB|atpE	atpB-atpE	62181	62308	0	128	LSC	0.300971	31	25	1	11	no	1.000000	2	1.000000	NA	0.804688	73.300000
atpE	gene	atpE	atpE	62309	62710	1	402	LSC	0.474747	141	105	15	11	no	1.000000	2	1.000000	NA	0.738806	74.400000
IGS_077	igs	atpE|rps4	atpE-rps4	62711	62840	0	130	LSC	0.462264	49	24	5	0	no	1.000000	2	1.000000	NA	0.815385	73.600000
rps4	gene	rps4	rps4	62841	63440	1	600	LSC	0.460554	216	131	1	0	no	1.000000	2	1.000000	NA	0.781667	78.900000
IGS_078	igs	rps4|trnS(gga)	rps4-trnS(gga)	63441	63608	0	168	LSC	0.344086	32	75	0	17	no	1.000000	2	1.000000	NA	0.553571	66.900000
trnS(gga)	tRNA	trnS(gga)	trnS(gga)	63609	63693	1	85	LSC	0.449275	31	16	3	4	no	1.000000	2	1.000000	NA	0.811765	73.700000
IGS_079	igs	trnS(gga)|psaI	trnS(gga)-psaI	63694	63781	0	88	LSC	0.341463	28	6	0	0	no	1.000000	2	1.000000	NA	0.931818	76.800000
psaI	gene	psaI	psaI	63782	63892	-1	111	LSC	0.153153	17	0	0	2	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_080	igs	psaI|chlI	psaI-chlI	63893	64011	0	119	LSC	0.287129	29	18	5	24	no	1.000000	2	1.000000	NA	0.848739	74.900000
chlI	gene	chlI	chlI	64012	65118	-1	1107	LSC	0.163534	174	43	8	9	yes	1.000000	2	1.000000	NA	0.961156	83.100000
IGS_081	igs	chlI|petA	chlI-petA	65119	65409	0	291	LSC	0.309645	61	94	2	5	no	1.000000	2	1.000000	NA	0.676976	69.800000
petA	gene	petA	petA	65410	66369	1	960	LSC	0.165612	157	12	3	6	no	1.000000	2	1.000000	NA	0.987500	80.200000
IGS_082	igs	petA|petL	petA-petL	66370	66419	0	50	LSC	0.200000	10	0	0	3	no	1.000000	2	1.000000	NA	1.000000	72.500000
petL	gene	petL	petL	66420	66515	1	96	LSC	0.166667	16	0	3	23	no	1.000000	2	1.000000	NA	1.000000	72.700000
IGS_083	igs	petL|petG	petL-petG	66516	66609	0	94	LSC	0.423077	22	42	3	11	no	1.000000	2	1.000000	NA	0.553191	67.100000
petG	gene	petG	petG	66610	66723	1	114	LSC	0.078947	9	0	2	2	no	1.000000	2	1.000000	NA	1.000000	70.000000
IGS_084	igs	petG|psbD	petG-psbD	66724	66928	0	205	LSC	0.309645	61	8	28	9	no	1.000000	2	1.000000	NA	0.960976	77.000000
psbD	gene	psbD	psbD	66929	67987	1	1059	LSC	0.091596	97	0	0	24	no	1.000000	2	1.000000	NA	1.000000	77.700000
psbC	gene	psbC	psbC	67935	69356	1	1422	LSC	0.126582	180	0	1	0	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_086	igs	psbC|orf105	psbC-orf105	69357	69983	0	627	LSC	0.401945	248	10	9	1	yes	1.000000	2	1.000000	NA	0.984051	80.400000
orf105	gene	orf105	orf105	69984	70301	1	318	LSC	0.460064	144	5	2	0	no	1.000000	2	1.000000	NA	0.984277	74.400000
IGS_087	igs	orf105|psbA	orf105-psbA	70302	71124	0	823	IRb	0.415519	332	24	2	0	yes	1.000000	2	1.000000	NA	0.970838	81.600000
psbA	gene	psbA	psbA	71125	72183	-1	1059	IRb	0.464870	483	20	1	1	yes	1.000000	2	1.000000	NA	0.981114	80.700000
IGS_088	igs	psbA|psbM	psbA-psbM	72184	72628	0	445	IRb	0.460674	205	0	0	20	no	1.000000	2	1.000000	NA	1.000000	75.500000
psbM	gene	psbM	psbM	72629	72742	1	114	IRb	0.145631	15	11	0	0	no	1.000000	2	1.000000	NA	0.903509	76.000000
IGS_089	igs	psbM|trnD(guc)	psbM-trnD(guc)	72743	72992	0	250	IRb	0.476190	100	40	0	3	no	1.000000	2	1.000000	NA	0.840000	74.200000
trnD(guc)	tRNA	trnD(guc)	trnD(guc)	72993	73066	1	74	IRb	0.027027	2	0	4	1	no	1.000000	2	1.000000	NA	1.000000	53.100000
IGS_090	igs	trnD(guc)|trnMe(cau)	trnD(guc)-trnMe(cau)	73067	73449	0	383	IRb	0.458498	116	130	4	32	no	1.000000	2	1.000000	NA	0.660574	71.200000
trnMe(cau)	tRNA	trnMe(cau)	trnMe(cau)	73450	73523	1	74	IRb	0.027027	2	0	0	1	no	1.000000	2	1.000000	NA	1.000000	53.000000
IGS_091	igs	trnMe(cau)|trnS(gcu)	trnMe(cau)-trnS(gcu)	73524	73534	0	11	IRb	0.454545	5	0	29	45	no	1.000000	2	1.000000	NA	1.000000	74.700000
trnS(gcu)	tRNA	trnS(gcu)	trnS(gcu)	73535	73622	1	88	IRb	0.056818	5	0	0	2	no	1.000000	2	1.000000	NA	1.000000	67.100000
IGS_092	igs	trnS(gcu)|orf195	trnS(gcu)-orf195	73623	73656	0	34	IRb	0.400000	12	4	26	7	no	1.000000	2	1.000000	NA	0.882353	76.000000
orf195	gene	orf195	orf195	73657	74244	-1	588	IRb	0.429293	170	192	2	2	no	1.000000	2	1.000000	NA	0.673469	75.700000
IGS_093	igs	orf195|rrs	orf195-rrs	74245	74885	0	641	IRb	0.391304	171	204	1	43	no	1.000000	2	1.000000	NA	0.681747	76.100000
rrs	rRNA	rrs	rrs	74886	76381	1	1496	IRb	0.033693	50	12	6	8	no	1.000000	2	1.000000	NA	0.991979	64.300000
IGS_094	igs	rrs|trnI(gau)	rrs-trnI(gau)	76382	76470	0	89	IRb	0.325843	29	0	89	76	no	1.000000	2	1.000000	NA	1.000000	78.200000
trnI(gau)	tRNA	trnI(gau)	trnI(gau)	76471	76544	1	74	IRb	0.000000	0	0	0	2	no	0.000000	1	0.000000	NA	1.000000	18.800000
IGS_095	igs	trnI(gau)|trnA(ugc)	trnI(gau)-trnA(ugc)	76545	76587	0	43	IRb	0.279070	12	0	74	80	no	1.000000	2	1.000000	NA	1.000000	78.000000
trnA(ugc)	tRNA	trnA(ugc)	trnA(ugc)	76588	76660	1	73	IRb	0.000000	0	0	2	7	no	0.000000	1	0.000000	NA	1.000000	18.900000
IGS_096	igs	trnA(ugc)|rrl	trnA(ugc)-rrl	76661	76747	0	87	IRb	0.333333	29	0	75	9	no	1.000000	2	1.000000	NA	1.000000	73.200000
rrl	rRNA	rrl	rrl	76748	79668	1	2921	IRb	0.063122	184	6	1	3	no	1.000000	2	1.000000	NA	0.997946	71.400000
IGS_097	igs	rrl|rrf	rrl-rrf	79669	79822	0	154	IRb	0.448052	69	0	10	3	no	1.000000	2	1.000000	NA	1.000000	72.700000
rrf	rRNA	rrf	rrf	79823	79942	1	120	IRb	0.083333	10	0	9	2	no	1.000000	2	1.000000	NA	1.000000	70.600000
IGS_098	igs	rrf|trnG(gcc)	rrf-trnG(gcc)	79943	80229	0	287	IRb	0.365854	105	0	25	15	no	1.000000	2	1.000000	NA	1.000000	73.600000
trnG(gcc)	tRNA	trnG(gcc)	trnG(gcc)	80230	80301	1	72	IRb	0.041667	3	0	6	0	no	1.000000	2	1.000000	NA	1.000000	61.500000
IGS_099	igs	trnG(gcc)|trnS(uga)	trnG(gcc)-trnS(uga)	80302	80559	0	258	IRb	0.403101	104	0	13	45	no	1.000000	2	1.000000	NA	1.000000	73.500000
trnS(uga)	tRNA	trnS(uga)	trnS(uga)	80560	80643	1	84	IRb	0.083333	7	0	0	0	no	1.000000	2	1.000000	NA	1.000000	70.400000
IGS_100	igs	trnS(uga)|trnL(uag)	trnS(uga)-trnL(uag)	80644	80796	0	153	IRb	0.536232	37	84	26	81	no	1.000000	2	1.000000	NA	0.450980	67.600000
trnL(uag)	tRNA	trnL(uag)	trnL(uag)	80797	80877	1	81	IRb	0.000000	0	0	2	0	no	0.000000	1	0.000000	NA	1.000000	18.800000
IGS_101	igs	trnL(uag)|cysT	trnL(uag)-cysT	80878	81116	0	239	IRb	0.408511	96	4	83	5	no	1.000000	2	1.000000	NA	0.983264	74.500000
cysT	gene	cysT	cysT	81117	81935	1	819	SSC	0.208791	171	0	2	1	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_102	igs	cysT|ycf1	cysT-ycf1	81936	82000	0	65	SSC	0.307692	20	0	9	9	no	1.000000	2	1.000000	NA	1.000000	73.200000
ycf1	gene	ycf1	ycf1	82001	84427	1	2427	SSC	0.285596	688	18	4	6	no	1.000000	2	1.000000	NA	0.992583	77.800000
IGS_103	igs	ycf1|ccsA	ycf1-ccsA	84428	84499	0	72	SSC	0.338235	23	4	6	0	no	1.000000	2	1.000000	NA	0.944444	77.200000
ccsA	gene	ccsA	ccsA	84500	85411	1	912	SSC	0.280936	252	15	1	4	no	1.000000	2	1.000000	NA	0.983553	80.400000
IGS_104	igs	ccsA|trnR(acg)	ccsA-trnR(acg)	85412	85461	0	50	SSC	0.306122	15	1	9	49	no	1.000000	2	1.000000	NA	0.980000	75.100000
trnR(acg)	tRNA	trnR(acg)	trnR(acg)	85462	85535	1	74	SSC	0.027027	2	0	2	3	no	1.000000	2	1.000000	NA	1.000000	53.200000
IGS_105	igs	trnR(acg)|minD	trnR(acg)-minD	85536	85672	0	137	SSC	0.405660	43	31	8	3	no	1.000000	2	1.000000	NA	0.773723	72.600000
minD	gene	minD	minD	85673	86524	1	852	SSC	0.201878	172	0	1	0	no	1.000000	2	1.000000	NA	1.000000	78.800000
IGS_106	igs	minD|psaC	minD-psaC	86525	86592	0	68	SSC	0.397059	27	0	2	11	no	1.000000	2	1.000000	NA	1.000000	72.600000
psaC	gene	psaC	psaC	86593	86838	1	246	SSC	0.092050	22	7	3	17	no	1.000000	2	1.000000	NA	0.971545	74.200000
IGS_107	igs	psaC|ycf20	psaC-ycf20	86839	86919	0	81	SSC	0.344262	21	20	27	5	no	1.000000	2	1.000000	NA	0.753086	72.200000
ycf20	gene	ycf20	ycf20	86920	87234	1	315	SSC	0.254839	79	5	14	1	no	1.000000	2	1.000000	NA	0.984127	74.400000
IGS_108	igs	ycf20|trnN(guu)	ycf20-trnN(guu)	87235	87290	0	56	SSC	0.400000	22	1	1	6	no	1.000000	2	1.000000	NA	0.982143	74.300000
trnN(guu)	tRNA	trnN(guu)	trnN(guu)	87291	87362	1	72	SSC	0.027778	2	0	2	0	no	1.000000	2	1.000000	NA	1.000000	53.500000
IGS_109	igs	trnN(guu)|rpl32	trnN(guu)-rpl32	87363	87430	0	68	SSC	0.411765	28	0	7	1	no	1.000000	2	1.000000	NA	1.000000	72.600000
rpl32	gene	rpl32	rpl32	87431	87586	-1	156	SSC	0.243590	38	0	0	3	no	1.000000	2	1.000000	NA	1.000000	72.500000
IGS_110	igs	rpl32|trnL(uag)	rpl32-trnL(uag)	87587	87861	0	275	IRa	0.280000	77	0	3	83	no	1.000000	2	1.000000	NA	1.000000	72.700000
trnL(uag)	tRNA	trnL(uag)	trnL(uag)	87862	87942	-1	81	IRa	0.000000	0	0	0	2	no	0.000000	1	0.000000	NA	1.000000	18.800000
IGS_111	igs	trnL(uag)|trnS(uga)	trnL(uag)-trnS(uga)	87943	88095	0	153	IRa	0.536232	37	84	81	26	no	1.000000	2	1.000000	NA	0.450980	67.600000
trnS(uga)	tRNA	trnS(uga)	trnS(uga)	88096	88179	-1	84	IRa	0.083333	7	0	0	0	no	1.000000	2	1.000000	NA	1.000000	70.400000
IGS_112	igs	trnS(uga)|trnG(gcc)	trnS(uga)-trnG(gcc)	88180	88437	0	258	IRa	0.403101	104	0	45	13	no	1.000000	2	1.000000	NA	1.000000	73.500000
trnG(gcc)	tRNA	trnG(gcc)	trnG(gcc)	88438	88509	-1	72	IRa	0.041667	3	0	0	6	no	1.000000	2	1.000000	NA	1.000000	61.500000
IGS_113	igs	trnG(gcc)|rrf	trnG(gcc)-rrf	88510	88796	0	287	IRa	0.365854	105	0	15	25	no	1.000000	2	1.000000	NA	1.000000	73.600000
rrf	rRNA	rrf	rrf	88797	88916	-1	120	IRa	0.083333	10	0	2	9	no	1.000000	2	1.000000	NA	1.000000	70.600000
IGS_114	igs	rrf|rrl	rrf-rrl	88917	89070	0	154	IRa	0.448052	69	0	3	10	no	1.000000	2	1.000000	NA	1.000000	72.700000
rrl	rRNA	rrl	rrl	89071	91991	-1	2921	IRa	0.063122	184	6	3	1	no	1.000000	2	1.000000	NA	0.997946	71.400000
IGS_115	igs	rrl|trnA(ugc)	rrl-trnA(ugc)	91992	92078	0	87	IRa	0.333333	29	0	9	75	no	1.000000	2	1.000000	NA	1.000000	73.200000
trnA(ugc)	tRNA	trnA(ugc)	trnA(ugc)	92079	92151	-1	73	IRa	0.000000	0	0	7	2	no	0.000000	1	0.000000	NA	1.000000	18.900000
IGS_116	igs	trnA(ugc)|trnI(gau)	trnA(ugc)-trnI(gau)	92152	92194	0	43	IRa	0.279070	12	0	80	74	no	1.000000	2	1.000000	NA	1.000000	78.000000
trnI(gau)	tRNA	trnI(gau)	trnI(gau)	92195	92268	-1	74	IRa	0.000000	0	0	2	0	no	0.000000	1	0.000000	NA	1.000000	18.800000
IGS_117	igs	trnI(gau)|rrs	trnI(gau)-rrs	92269	92357	0	89	IRa	0.325843	29	0	76	89	no	1.000000	2	1.000000	NA	1.000000	78.200000
rrs	rRNA	rrs	rrs	92358	93853	-1	1496	IRa	0.033693	50	12	8	6	no	1.000000	2	1.000000	NA	0.991979	64.300000
IGS_118	igs	rrs|orf195	rrs-orf195	93854	94494	0	641	IRa	0.391304	171	204	43	1	no	1.000000	2	1.000000	NA	0.681747	76.100000
orf195	gene	orf195	orf195	94495	95082	1	588	IRa	0.429293	170	192	2	2	no	1.000000	2	1.000000	NA	0.673469	75.700000
IGS_119	igs	orf195|trnS(gcu)	orf195-trnS(gcu)	95083	95116	0	34	IRa	0.400000	12	4	7	26	no	1.000000	2	1.000000	NA	0.882353	76.000000
trnS(gcu)	tRNA	trnS(gcu)	trnS(gcu)	95117	95204	-1	88	IRa	0.056818	5	0	2	0	no	1.000000	2	1.000000	NA	1.000000	67.100000
IGS_120	igs	trnS(gcu)|trnMe(cau)	trnS(gcu)-trnMe(cau)	95205	95215	0	11	IRa	0.454545	5	0	45	29	no	1.000000	2	1.000000	NA	1.000000	74.700000
trnMe(cau)	tRNA	trnMe(cau)	trnMe(cau)	95216	95289	-1	74	IRa	0.027027	2	0	1	0	no	1.000000	2	1.000000	NA	1.000000	53.000000
IGS_121	igs	trnMe(cau)|trnD(guc)	trnMe(cau)-trnD(guc)	95290	95672	0	383	IRa	0.458498	116	130	32	4	no	1.000000	2	1.000000	NA	0.660574	71.200000
trnD(guc)	tRNA	trnD(guc)	trnD(guc)	95673	95746	-1	74	IRa	0.027027	2	0	1	4	no	1.000000	2	1.000000	NA	1.000000	53.100000
IGS_122	igs	trnD(guc)|psbM	trnD(guc)-psbM	95747	95996	0	250	IRa	0.476190	100	40	3	0	no	1.000000	2	1.000000	NA	0.840000	74.200000
psbM	gene	psbM	psbM	95997	96110	-1	114	IRa	0.145631	15	11	0	0	no	1.000000	2	1.000000	NA	0.903509	76.000000
IGS_123	igs	psbM|psbA	psbM-psbA	96111	96555	0	445	IRa	0.470998	203	14	20	0	no	1.000000	2	1.000000	NA	0.968539	78.600000
psbA	gene	psbA	psbA	96556	97614	1	1059	IRa	0.490385	510	19	0	0	yes	1.000000	2	1.000000	NA	0.982059	80.500000
IGS_124	igs	psbA|atpA	psbA-atpA	97615	148	0	874	IRa	0.480576	334	179	2	176	no	1.000000	2	1.000000	NA	0.795195	79.400000