primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AGTCGCACTTAAAAGCCGAG GCGCTCAACCTACAGTAACT 20 20 50.0 50.0 58.6 57.6 6.4 0.0 0.935945 4078 4834 845-952 1.000000 80.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TAGTCGCACTTAAAAGCCGA GCGCTCAACCTACAGTAACT 20 20 45.0 50.0 57.3 57.6 3.0 0.0 1.094097 4078 4834 846-953 1.000000 79.4 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCGCACTTAAAAGCCGAGTA GCGCTCAACCTACAGTAACT 20 20 45.0 50.0 57.3 57.6 3.0 0.0 1.094097 4078 4834 843-950 1.000000 79.4 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CGCACTTAAAAGCCGAGTAC GCGCTCAACCTACAGTAACT 20 20 50.0 50.0 57.2 57.6 0.0 0.0 1.147606 4078 4834 842-949 1.000000 79.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGTCGCACTTAAAAGCCGAG GGCGCTCAACCTACAGTAAC 20 20 50.0 55.0 58.6 58.6 6.4 7.6 1.213599 4078 4834 846-953 1.000000 78.5 trnS_GCU-trnG_UCC_p1 trnS_GCU-trnG_UCC 1 CAATCCGACGCTTTAGTCCA AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.0 56.4 0.0 0.0 1.640998 8232 9379 787-1335 1.000000 76.1 trnS_GCU-trnG_UCC_p2 trnS_GCU-trnG_UCC 2 AATCCGACGCTTTAGTCCAC AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.0 56.4 0.0 0.0 1.642386 8232 9379 786-1334 1.000000 76.1 trnS_GCU-trnG_UCC_p3 trnS_GCU-trnG_UCC 3 GATAGAGCGGAGAGAGAGGG AACCGAAAGACCCCTTAACT 20 20 60.0 45.0 58.2 56.4 0.0 0.0 1.815199 8232 9379 847-1395 1.000000 74.5 trnS_GCU-trnG_UCC_p4 trnS_GCU-trnG_UCC 4 CAATCCGACGCTTTAGTCCA AAACCGAAAGACCCCTTAACT 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.875121 8232 9379 788-1336 1.000000 74.2 trnS_GCU-trnG_UCC_p5 trnS_GCU-trnG_UCC 5 AATCCGACGCTTTAGTCCAC AAACCGAAAGACCCCTTAACT 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.876509 8232 9379 787-1335 1.000000 74.2 rpoB-trnC_GCA_p1 rpoB-trnC_GCA 1 CCAATTCTTCCGTCAAGCCT TAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.2 57.5 0.0 14.6 0.698720 27015 27880 987-1144 1.000000 83.5 rpoB-trnC_GCA_p2 rpoB-trnC_GCA 2 TCCAATTCTTCCGTCAAGCC TAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.2 57.5 0.0 14.6 0.703889 27015 27880 988-1145 1.000000 83.4 rpoB-trnC_GCA_p3 rpoB-trnC_GCA 3 CCAATTCTTCCGTCAAGCCT TTTGTTCATCAGGCGACACC 20 20 50.0 50.0 58.2 58.8 0.0 0.0 0.938794 27015 27880 1024-1181 1.000000 81.4 rpoB-trnC_GCA_p4 rpoB-trnC_GCA 4 TCCAATTCTTCCGTCAAGCC TTTGTTCATCAGGCGACACC 20 20 50.0 50.0 58.2 58.8 0.0 0.0 0.943963 27015 27880 1025-1182 1.000000 81.3 rpoB-trnC_GCA_p5 rpoB-trnC_GCA 5 CCAATTCTTCCGTCAAGCCT GACACCCGGATTTGAACTGG 20 20 50.0 55.0 58.2 58.8 0.0 0.7 1.008345 27015 27880 1010-1167 1.000000 80.9 trnI_CAU-ycf2_p1 trnI_CAU-ycf2 1 GTTGGGCGCTTTAACCATTC AGGATTTTAATTGATGTCGTTTCA 20 24 50.0 29.2 58.0 55.4 7.6 0.0 6.646853 86982 87177 203-628 0.846154 40.6 trnI_CAU-ycf2_p2 trnI_CAU-ycf2 2 AGTTGGGCGCTTTAACCATT AGGATTTTAATTGATGTCGTTTCA 20 24 45.0 29.2 58.4 55.4 7.6 0.0 7.009789 86982 87177 204-629 0.846154 40.6 trnI_CAU-ycf2_p3 trnI_CAU-ycf2 3 TTGGGCGCTTTAACCATTCA AGGATTTTAATTGATGTCGTTTCA 20 24 45.0 29.2 58.4 55.4 7.6 0.0 7.015660 86982 87177 202-627 0.846154 40.6 trnI_CAU-ycf2_p4 trnI_CAU-ycf2 4 GTTGGGCGCTTTAACCATTC GGATTTTAATTGATGTCGTTTCA 20 23 50.0 30.4 58.0 54.0 7.6 0.0 7.044270 86982 87177 202-627 0.846154 40.6 trnI_CAU-ycf2_p5 trnI_CAU-ycf2 5 ATTGAACATTGGCGTGCATC AGGATTTTAATTGATGTCGTTTCA 20 24 45.0 29.2 57.7 55.4 0.0 0.0 6.920353 86982 87177 259-684 0.846154 40.2 trnN_GUU-ycf1_p1 trnN_GUU-ycf1 1 TAGCATAGCAAAGACGCGTT GGAAGAGATAAGAGGGCCCT 20 20 45.0 55.0 58.0 57.9 15.5 29.2 0.115336 109476 109809 823-1649 1.000000 91.1 trnN_GUU-ycf1_p2 trnN_GUU-ycf1 2 TAGCATAGCAAAGACGCGTT CCTTCTTCCATAACCCGAGC 20 20 45.0 55.0 58.0 58.0 15.5 0.0 0.049656 109476 109809 851-1677 0.974359 90.6 trnN_GUU-ycf1_p3 trnN_GUU-ycf1 3 GGCAGAATAGCAGAGCAAGT CCTTCTTCCATAACCCGAGC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.080603 109476 109809 882-1708 0.974359 90.3 trnN_GUU-ycf1_p4 trnN_GUU-ycf1 4 GAGCGAGCCCTTTAATTCCA CCTTCTTCCATAACCCGAGC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.083460 109476 109809 587-1413 0.974359 90.3 trnN_GUU-ycf1_p5 trnN_GUU-ycf1 5 GTAACCCAGGCCAGAATCAG CCTTCTTCCATAACCCGAGC 20 20 55.0 55.0 58.0 58.0 5.0 0.0 0.089196 109476 109809 999-1520 0.923077 87.1 ycf1_p1 ycf1 1 TAGCATAGCAAAGACGCGTT CAAATGGAGTTGGGGTTGGA 20 20 45.0 50.0 58.0 58.0 15.5 0.0 0.012825 109810 111146 1319-2600 0.769231 82.7 ycf1_p2 ycf1 2 CCCGGAACTTCTTCGTAGTG CAAATGGAGTTGGGGTTGGA 20 20 55.0 50.0 58.0 58.0 0.7 0.0 0.016073 109810 111146 853-2174 0.769231 82.6 ycf1_p3 ycf1 3 CCGGAACTTCTTCGTAGTGG CAAATGGAGTTGGGGTTGGA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.016073 109810 111146 852-2173 0.769231 82.6 ycf1_p4 ycf1 4 GAGCGAGCCCTTTAATTCCA CAAATGGAGTTGGGGTTGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.046629 109810 111146 1055-2336 0.769231 82.4 ycf1_p5 ycf1 5 GAGCTACTGAGGAACAACGG CAAATGGAGTTGGGGTTGGA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.010573 109810 111146 939-2220 0.743590 81.7 ndhF-rpl32_p1 ndhF-rpl32 1 TGCATATTGATATGTATGTTCCA AGAAAGAGCTTTTACTGCAGT 23 21 30.4 38.1 53.7 55.4 11.5 25.1 10.883754 113373 114147 849-974 1.000000 49.5 ndhF-rpl32_p2 ndhF-rpl32 2 TGCATATTGATATGTATGTTCCA AAGAAAGAGCTTTTACTGCAGT 23 22 30.4 36.4 53.7 56.2 11.5 25.1 11.119561 113373 114147 850-975 1.000000 49.5 ndhF-rpl32_p3 ndhF-rpl32 3 TGCATATTGATATGTATGTTCCA AGAAAGAGCTTTTACTGCAGTT 23 22 30.4 36.4 53.7 56.2 11.5 27.1 11.119561 113373 114147 849-974 1.000000 49.5 ndhF-rpl32_p4 ndhF-rpl32 4 ATGCATATTGATATGTATGTTCCA AGAAAGAGCTTTTACTGCAGT 24 21 29.2 38.1 54.3 55.4 12.0 25.1 11.303980 113373 114147 850-975 1.000000 49.5 ndhF-rpl32_p5 ndhF-rpl32 5 TGCATATTGATATGTATGTTCCAT AGAAAGAGCTTTTACTGCAGT 24 21 29.2 38.1 54.3 55.4 11.5 25.1 11.303980 113373 114147 849-974 1.000000 49.5 rpl32-trnL_UAG_p1 rpl32-trnL_UAG 1 ACTCCTTTTTGAATGGCGGT AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.012454 114298 115132 1019-1053 0.974359 88.6 rpl32-trnL_UAG_p2 rpl32-trnL_UAG 2 ACTCCTTTTTGAATGGCGGT CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.013825 114298 115132 1020-1054 0.974359 88.5 rpl32-trnL_UAG_p3 rpl32-trnL_UAG 3 ACTCCTTTTTGAATGGCGGT TGGCGAAACCTTGGGTAAAA 20 20 45.0 45.0 58.0 57.9 0.0 0.0 0.073458 114298 115132 1491-1531 0.974359 86.6 rpl32-trnL_UAG_p4 rpl32-trnL_UAG 4 TCGCACGCTGAACTTAATCA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.080947 114298 115132 1306-1406 0.897436 85.0 rpl32-trnL_UAG_p5 rpl32-trnL_UAG 5 TCGCACGCTGAACTTAATCA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.082318 114298 115132 1307-1407 0.897436 85.0 ycf1_p1 ycf1 1 ATTTTGCGTCTTTGAGCACG GAAAGCGGAAGAGGAAGAGG 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.053694 128557 128676 291-432 0.923077 88.5 ycf1_p2 ycf1 2 CTGAATCCCGTCTGCTAACC GAAAGCGGAAGAGGAAGAGG 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.075813 128557 128676 859-1135 0.923077 88.3 ycf1_p3 ycf1 3 CAAAGCCAGTTCTTCCTCGT GAAAGCGGAAGAGGAAGAGG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.132903 128557 128676 217-358 0.923077 87.9 ycf1_p4 ycf1 4 ATTTTGCGTCTTTGAGCACG CCCAAGAAAAGCCAAACGTG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.184898 128557 128676 204-345 0.923077 87.4 ycf1_p5 ycf1 5 TCAAAGCCAGTTCTTCCTCG GAAAGCGGAAGAGGAAGAGG 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.186970 128557 128676 218-359 0.923077 87.4 ycf1-trnN_GUU_p1 ycf1-trnN_GUU 1 GGAAGAGATAAGAGGGCCCT TAGCATAGCAAAGACGCGTT 20 20 55.0 45.0 57.9 58.0 29.2 15.5 0.115336 130912 131245 823-1649 1.000000 91.1 ycf1-trnN_GUU_p2 ycf1-trnN_GUU 2 CCTTCTTCCATAACCCGAGC TAGCATAGCAAAGACGCGTT 20 20 55.0 45.0 58.0 58.0 0.0 15.5 0.049656 130912 131245 851-1677 0.974359 90.6 ycf1-trnN_GUU_p3 ycf1-trnN_GUU 3 CCTTCTTCCATAACCCGAGC GGCAGAATAGCAGAGCAAGT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.080603 130912 131245 882-1708 0.974359 90.3 ycf1-trnN_GUU_p4 ycf1-trnN_GUU 4 CCTTCTTCCATAACCCGAGC GAGCGAGCCCTTTAATTCCA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.083460 130912 131245 587-1413 0.974359 90.3 ycf1-trnN_GUU_p5 ycf1-trnN_GUU 5 CCTTCTTCCATAACCCGAGC GTAACCCAGGCCAGAATCAG 20 20 55.0 55.0 58.0 58.0 0.0 5.0 0.089196 130912 131245 999-1520 0.923077 86.4 ycf2_p1 ycf2 1 TCAGCCAATTGTCTCGATCG TCGAACCGAGAGATCCATGA 20 20 50.0 50.0 58.1 57.9 9.4 0.0 0.126221 151046 151165 743-806 1.000000 89.5 ycf2_p2 ycf2 2 TCAGCCAATTGTCTCGATCG GGGGATACACGTTACACCAC 20 20 50.0 55.0 58.1 58.0 9.4 0.0 0.087774 151046 151165 1176-1392 1.000000 88.4 ycf2_p3 ycf2 3 AAGCCTCGGACCAATCAATC GGGGATACACGTTACACCAC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.058458 151046 151165 705-882 0.897436 81.7 ycf2_p4 ycf2 4 AAGCCTCGGACCAATCAATC TCGAACCGAGAGATCCATGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.096905 151046 151165 278-296 0.897436 81.3 ycf2_p5 ycf2 5 AAGAAACGCAAACGAAGTGC GGGGATACACGTTACACCAC 20 20 45.0 55.0 58.2 58.0 0.0 0.0 0.191754 151046 151165 748-925 0.897436 80.5 ycf2-trnI_CAU_p1 ycf2-trnI_CAU 1 AGGATTTTAATTGATGTCGTTTCA GTTGGGCGCTTTAACCATTC 24 20 29.2 50.0 55.4 58.0 0.0 7.6 6.646853 153544 153739 203-628 0.846154 40.4 ycf2-trnI_CAU_p2 ycf2-trnI_CAU 2 AGGATTTTAATTGATGTCGTTTCA TTGGGCGCTTTAACCATTCA 24 20 29.2 45.0 55.4 58.4 0.0 7.6 7.015660 153544 153739 202-627 0.846154 40.4 ycf2-trnI_CAU_p3 ycf2-trnI_CAU 3 GGATTTTAATTGATGTCGTTTCA GTTGGGCGCTTTAACCATTC 23 20 30.4 50.0 54.0 58.0 0.0 7.6 7.044270 153544 153739 202-627 0.846154 40.4 ycf2-trnI_CAU_p4 ycf2-trnI_CAU 4 AGGATTTTAATTGATGTCGTTTCA AGTTGGGCGCTTTAACCATT 24 20 29.2 45.0 55.4 58.4 0.0 7.6 7.009789 153544 153739 204-629 0.846154 40.3 ycf2-trnI_CAU_p5 ycf2-trnI_CAU 5 AGGATTTTAATTGATGTCGTTTCA ATTGAACATTGGCGTGCATC 24 20 29.2 45.0 55.4 57.7 0.0 0.0 6.920353 153544 153739 259-684 0.846154 39.9