Hotspot

trnT-UGU-trnL-UAA

LSC · 49132-49585 · 454 bp

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Pi 0.0011
MarkerSeek score 47.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 503-504 bp 1.0 79.4
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 534-535 bp 1.0 79.1
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 511-512 bp 1.0 78.9
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 542-543 bp 1.0 78.6
trnT-UGU-trnL-UAA_p5 TGAAAAGCCAGCTATCGGAG ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 551-552 bp 1.0 77.9