feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 146 223 -1 78 LSC 0.000000 0 0 6 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 224 417 0 194 LSC 0.010309 2 0 84 300 no 1.000000 2 1.000000 NA 1.000000 49.700000 psbA gene psbA psbA 418 1479 -1 1062 LSC 0.001883 2 0 49 184 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1480 1783 0 304 LSC 0.009868 3 0 167 140 no 1.000000 2 1.000000 NA 1.000000 53.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1784 1818 -1 35 LSC 0.000000 0 0 74 105 no 0.000000 1 0.000000 NA 1.000000 24.300000 matK gene matK matK 2097 3614 -1 1518 LSC 0.010540 16 0 10 161 no 1.000000 2 1.000000 NA 1.000000 50.500000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3615 4347 0 733 LSC 0.011096 8 12 74 54 no 1.000000 2 1.000000 NA 0.983629 55.700000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4348 4384 -1 37 LSC 0.000000 0 0 74 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4385 5048 0 664 LSC 0.022624 15 1 111 215 no 1.000000 2 1.000000 NA 0.998494 65.200000 rps16 gene rps16 rps16 5049 6209 -1 1161 LSC 0.008628 10 2 128 185 no 1.000000 2 1.000000 NA 0.998277 58.500000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6210 7976 0 1767 LSC 0.044490 65 306 134 300 yes 1.000000 2 1.000000 NA 0.826825 79.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7977 8048 -1 72 LSC 0.000000 0 0 41 300 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 8049 8414 0 366 LSC 0.002732 1 0 113 32 no 1.000000 2 1.000000 NA 1.000000 42.800000 psbK gene psbK psbK 8415 8600 1 186 LSC 0.010753 2 0 14 8 no 1.000000 2 1.000000 NA 1.000000 44.300000 IGS_009 igs psbK|psbI psbK-psbI 8601 9028 0 428 LSC 0.014286 6 8 132 184 no 1.000000 2 1.000000 NA 0.981308 60.100000 psbI gene psbI psbI 9029 9139 1 111 LSC 0.000000 0 0 86 73 no 0.000000 1 0.000000 NA 1.000000 24.200000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 9140 9217 0 78 LSC 0.012821 1 0 197 162 no 1.000000 2 1.000000 NA 1.000000 57.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 9218 9305 -1 88 LSC 0.000000 0 0 4 74 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_011 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 9306 10916 0 1611 LSC 0.020270 30 131 92 43 no 1.000000 2 1.000000 NA 0.918684 62.200000 trnR-UCU tRNA trnR-UCU trnR-UCU 10917 10988 1 72 LSC 0.013889 1 0 62 14 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_012 igs trnR-UCU|atpA trnR-UCU-atpA 10989 11084 0 96 LSC 0.031250 3 0 28 124 no 1.000000 2 1.000000 NA 1.000000 57.600000 atpA gene atpA atpA 11085 12596 -1 1512 LSC 0.006614 10 0 15 300 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_013 igs atpA|atpF atpA-atpF 12597 12664 0 68 LSC 0.000000 0 0 7 264 no 0.000000 1 0.000000 NA 1.000000 19.300000 atpF gene atpF atpF 12665 13219 -1 555 LSC 0.007207 4 0 75 109 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_014 igs atpF|atpH atpF-atpH 13220 13837 0 618 LSC 0.021488 13 13 124 300 no 1.000000 2 1.000000 NA 0.978964 67.400000 atpH gene atpH atpH 13838 14086 -1 249 LSC 0.000000 0 0 52 113 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_015 igs atpH|atpI atpH-atpI 14087 14354 0 268 LSC 0.007519 2 2 300 300 no 1.000000 2 1.000000 NA 0.992537 57.500000 atpI gene atpI atpI 14355 15098 -1 744 LSC 0.002688 2 0 29 50 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_016 igs atpI|rps2 atpI-rps2 15099 15347 0 249 LSC 0.012048 3 0 35 300 no 1.000000 2 1.000000 NA 1.000000 47.100000 rps2 gene rps2 rps2 15348 16058 -1 711 LSC 0.005626 4 0 162 232 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_017 igs rps2|rpoC2 rps2-rpoC2 16059 16294 0 236 LSC 0.004902 1 32 229 108 no 1.000000 2 1.000000 NA 0.864407 50.800000 rpoC2 gene rpoC2 rpoC2 16295 20431 -1 4137 LSC 0.005801 24 0 3 46 no 1.000000 2 1.000000 NA 1.000000 42.400000 IGS_018 igs rpoC2|rpoC1 rpoC2-rpoC1 20432 20618 0 187 LSC 0.005348 1 0 197 276 no 1.000000 2 1.000000 NA 1.000000 55.300000 rpoC1 gene rpoC1 rpoC1 20619 23433 -1 2815 LSC 0.004263 12 0 140 12 no 1.000000 2 1.000000 NA 1.000000 44.400000 IGS_019 igs rpoC1|rpoB rpoC1-rpoB 23434 23459 0 26 LSC 0.038462 1 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 74.600000 rpoB gene rpoB rpoB 23460 26669 -1 3210 LSC 0.004673 15 0 13 12 no 1.000000 2 1.000000 NA 1.000000 43.900000 IGS_020 igs rpoB|trnC-GCA rpoB-trnC-GCA 26670 27953 0 1284 LSC 0.015974 20 32 3 241 no 1.000000 2 1.000000 NA 0.975078 55.500000 trnC-GCA tRNA trnC-GCA trnC-GCA 27954 28025 1 72 LSC 0.000000 0 0 35 169 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_021 igs trnC-GCA|petN trnC-GCA-petN 28026 28245 0 220 LSC 0.004545 1 0 107 120 no 1.000000 2 1.000000 NA 1.000000 48.100000 petN gene petN petN 28246 28335 1 90 LSC 0.000000 0 0 50 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_022 igs petN|psbM petN-psbM 28336 29064 0 729 LSC 0.009709 7 8 140 114 no 1.000000 2 1.000000 NA 0.989026 58.900000 psbM gene psbM psbM 29065 29169 -1 105 LSC 0.000000 0 0 300 9 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_023 igs psbM|trnD-GUC psbM-trnD-GUC 29170 30166 0 997 LSC 0.012487 12 36 300 53 no 1.000000 2 1.000000 NA 0.963892 58.300000 trnD-GUC tRNA trnD-GUC trnD-GUC 30167 30240 -1 74 LSC 0.013514 1 0 37 19 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_024 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30241 30698 0 458 LSC 0.032911 13 63 20 300 no 1.000000 2 1.000000 NA 0.862445 63.000000 trnY-GUA tRNA trnY-GUA trnY-GUA 30699 30782 -1 84 LSC 0.000000 0 0 8 219 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_025 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 30783 30841 0 59 LSC 0.000000 0 0 92 160 no 0.000000 1 0.000000 NA 1.000000 25.700000 trnE-UUC tRNA trnE-UUC trnE-UUC 30842 30914 -1 73 LSC 0.000000 0 0 151 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_026 igs trnE-UUC|psbD trnE-UUC-psbD 30915 33258 0 2344 LSC 0.020175 46 64 224 239 yes 1.000000 2 1.000000 NA 0.972696 71.200000 psbD gene psbD psbD 33259 34320 1 1062 LSC 0.002825 3 0 155 186 no 1.000000 2 1.000000 NA 1.000000 57.000000 psbC gene psbC psbC 34268 35689 1 1422 LSC 0.004923 7 0 300 7 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_028 igs psbC|trnS-UGA psbC-trnS-UGA 35690 35937 0 248 LSC 0.012097 3 0 72 142 no 1.000000 2 1.000000 NA 1.000000 49.900000 trnS-UGA tRNA trnS-UGA trnS-UGA 35938 36030 -1 93 LSC 0.000000 0 8 161 49 no 1.000000 2 1.000000 NA 0.913978 45.000000 IGS_029 igs trnS-UGA|psbZ trnS-UGA-psbZ 36031 36363 0 333 LSC 0.006006 2 0 254 270 no 1.000000 2 1.000000 NA 1.000000 56.600000 psbZ gene psbZ psbZ 36364 36552 1 189 LSC 0.000000 0 0 189 81 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_030 igs psbZ|trnG-UCC psbZ-trnG-UCC 36553 37222 0 670 LSC 0.041916 28 2 300 148 yes 1.000000 2 1.000000 NA 0.997015 79.200000 trnG-UCC tRNA trnG-UCC trnG-UCC 37223 37293 1 71 LSC 0.000000 0 0 6 77 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_031 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 37294 37436 0 143 LSC 0.020979 3 0 77 86 no 1.000000 2 1.000000 NA 1.000000 55.300000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 37437 37510 -1 74 LSC 0.000000 0 0 27 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_032 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37511 37677 0 167 LSC 0.012422 2 6 101 202 no 1.000000 2 1.000000 NA 0.964072 55.600000 rps14 gene rps14 rps14 37678 37980 -1 303 LSC 0.006601 2 0 26 200 no 1.000000 2 1.000000 NA 1.000000 43.300000 IGS_033 igs rps14|psaB rps14-psaB 37981 38108 0 128 LSC 0.000000 0 0 93 72 no 0.000000 1 0.000000 NA 1.000000 24.100000 psaB gene psaB psaB 38109 40313 -1 2205 LSC 0.003628 8 0 221 271 no 1.000000 2 1.000000 NA 1.000000 59.400000 IGS_034 igs psaB|psaA psaB-psaA 40314 40338 0 25 LSC 0.000000 0 0 248 246 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 40339 42591 -1 2253 LSC 0.003551 8 0 273 86 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_035 igs psaA|ycf3 psaA-ycf3 42592 43333 0 742 LSC 0.009576 7 11 254 300 no 1.000000 2 1.000000 NA 0.985175 65.700000 ycf3 gene ycf3 ycf3 43334 45325 -1 1992 LSC 0.004534 9 7 229 300 no 1.000000 2 1.000000 NA 0.996486 60.700000 IGS_036 igs ycf3|trnS-GGA ycf3-trnS-GGA 45326 46047 0 722 LSC 0.006925 5 0 258 110 no 1.000000 2 1.000000 NA 1.000000 56.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 46048 46134 1 87 LSC 0.000000 0 0 191 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_037 igs trnS-GGA|rps4 trnS-GGA-rps4 46135 46424 0 290 LSC 0.017241 5 0 278 56 no 1.000000 2 1.000000 NA 1.000000 51.600000 rps4 gene rps4 rps4 46425 47021 -1 597 LSC 0.011725 7 0 30 204 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_038 igs rps4|trnT-UGU rps4-trnT-UGU 47022 47547 0 526 LSC 0.021277 11 9 17 160 no 1.000000 2 1.000000 NA 0.982890 57.300000 trnT-UGU tRNA trnT-UGU trnT-UGU 47548 47620 -1 73 LSC 0.000000 0 0 15 87 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_039 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 47621 48434 0 814 LSC 0.019729 16 3 88 108 no 1.000000 2 1.000000 NA 0.996314 62.000000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 48435 48471 1 37 LSC 0.000000 0 0 0 71 no 0.000000 1 0.000000 NA 1.000000 18.800000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 48980 49029 1 50 LSC 0.000000 0 0 300 57 no 0.000000 1 0.000000 NA 1.000000 23.000000 IGS_042 igs trnL-UAA|ndhJ trnL-UAA-ndhJ 49030 50245 0 1216 LSC 0.012397 15 6 300 33 no 1.000000 2 1.000000 NA 0.995066 53.800000 ndhJ gene ndhJ ndhJ 50246 50722 -1 477 LSC 0.008386 4 0 20 256 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_043 igs ndhJ|ndhK ndhJ-ndhK 50723 50837 0 115 LSC 0.000000 0 0 182 141 no 0.000000 1 0.000000 NA 1.000000 29.300000 ndhK gene ndhK ndhK 50838 51518 -1 681 LSC 0.002937 2 0 297 116 no 1.000000 2 1.000000 NA 1.000000 54.100000 IGS_044 igs ndhK|ndhC ndhK-ndhC 51519 51574 0 56 LSC 0.000000 0 0 164 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 ndhC gene ndhC ndhC 51575 51937 -1 363 LSC 0.002755 1 0 220 110 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_045 igs ndhC|trnV-UAC ndhC-trnV-UAC 51938 52855 0 918 LSC 0.026018 23 34 300 41 no 1.000000 2 1.000000 NA 0.962963 65.300000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 52856 52892 -1 37 LSC 0.000000 0 0 292 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 53486 53521 -1 36 LSC 0.000000 0 0 82 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_048 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 53522 53706 0 185 LSC 0.021622 4 0 118 271 no 1.000000 2 1.000000 NA 1.000000 58.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 53707 53778 1 72 LSC 0.000000 0 0 17 199 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_049 igs trnM-CAU|atpE trnM-CAU-atpE 53779 53986 0 208 LSC 0.004808 1 0 89 41 no 1.000000 2 1.000000 NA 1.000000 43.300000 atpE gene atpE atpE 53987 54388 -1 402 LSC 0.002488 1 0 8 244 no 1.000000 2 1.000000 NA 1.000000 41.700000 IGS_050 igs atpE|atpB atpE-atpB 54389 54410 0 22 LSC 0.000000 0 0 300 222 no 0.000000 1 0.000000 NA 1.000000 33.800000 atpB gene atpB atpB 54411 55886 -1 1476 LSC 0.008130 12 0 300 300 no 1.000000 2 1.000000 NA 1.000000 63.400000 IGS_051 igs atpB|rbcL atpB-rbcL 55887 56662 0 776 LSC 0.002597 2 6 25 67 no 1.000000 2 1.000000 NA 0.992268 47.900000 rbcL gene rbcL rbcL 56663 58090 1 1428 LSC 0.007703 11 0 226 210 no 1.000000 2 1.000000 NA 1.000000 63.200000 IGS_052 igs rbcL|accD rbcL-accD 58091 58522 0 432 LSC 0.018779 8 6 300 3 no 1.000000 2 1.000000 NA 0.986111 52.600000 accD gene accD accD 58523 60031 1 1509 LSC 0.006627 10 0 52 5 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_053 igs accD|psaI accD-psaI 60032 60557 0 526 LSC 0.011407 6 0 33 168 no 1.000000 2 1.000000 NA 1.000000 51.200000 psaI gene psaI psaI 60558 60659 1 102 LSC 0.000000 0 0 3 66 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_054 igs psaI|ycf4 psaI-ycf4 60660 60934 0 275 LSC 0.007273 2 0 105 89 no 1.000000 2 1.000000 NA 1.000000 48.400000 ycf4 gene ycf4 ycf4 60935 61489 1 555 LSC 0.009009 5 0 56 163 no 1.000000 2 1.000000 NA 1.000000 52.200000 IGS_055 igs ycf4|cemA ycf4-cemA 61490 62281 0 792 LSC 0.087071 66 34 101 11 yes 1.000000 2 1.000000 NA 0.957071 81.700000 cemA gene cemA cemA 62282 62977 1 696 LSC 0.004310 3 0 251 73 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_056 igs cemA|petA cemA-petA 62978 63100 0 123 LSC 0.008333 1 3 81 300 no 1.000000 2 1.000000 NA 0.975610 50.700000 petA gene petA petA 63101 64063 1 963 LSC 0.002079 2 1 49 98 no 1.000000 2 1.000000 NA 0.998962 48.700000 IGS_057 igs petA|psbJ petA-psbJ 64064 64948 0 885 LSC 0.017083 13 124 116 257 no 1.000000 2 1.000000 NA 0.859887 64.300000 psbJ gene psbJ psbJ 64949 65071 -1 123 LSC 0.000000 0 0 102 134 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_058 igs psbJ|psbL psbJ-psbL 65072 65211 0 140 LSC 0.021898 3 3 225 300 no 1.000000 2 1.000000 NA 0.978571 67.100000 psbL gene psbL psbL 65212 65328 -1 117 LSC 0.000000 0 0 2 300 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_059 igs psbL|psbF psbL-psbF 65329 65354 0 26 LSC 0.000000 0 0 119 300 no 0.000000 1 0.000000 NA 1.000000 27.700000 psbF gene psbF psbF 65355 65474 -1 120 LSC 0.000000 0 0 145 300 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_060 igs psbF|psbE psbF-psbE 65475 65483 0 9 LSC 0.000000 0 0 265 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 65484 65735 -1 252 LSC 0.000000 0 0 274 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_061 igs psbE|petL psbE-petL 65736 66844 0 1109 LSC 0.024954 27 27 300 108 yes 1.000000 2 1.000000 NA 0.975654 68.500000 petL gene petL petL 66845 66940 1 96 LSC 0.000000 0 0 183 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_062 igs petL|petG petL-petG 66941 67130 0 190 LSC 0.010929 2 7 279 142 no 1.000000 2 1.000000 NA 0.963158 58.000000 petG gene petG petG 67131 67244 1 114 LSC 0.000000 0 0 93 28 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_063 igs petG|trnW-CCA petG-trnW-CCA 67245 67392 0 148 LSC 0.006757 1 0 207 95 no 1.000000 2 1.000000 NA 1.000000 48.500000 trnW-CCA tRNA trnW-CCA trnW-CCA 67393 67465 -1 73 LSC 0.000000 0 0 119 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_064 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 67466 67655 0 190 LSC 0.016484 3 8 192 135 no 1.000000 2 1.000000 NA 0.957895 61.100000 trnP-UGG tRNA trnP-UGG trnP-UGG 67656 67729 -1 74 LSC 0.000000 0 0 12 61 no 0.000000 1 0.000000 NA 1.000000 19.700000 trnP-GGG tRNA trnP-GGG trnP-GGG 67658 67728 -1 71 LSC 0.000000 0 0 14 62 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_066 igs trnP-GGG|psaJ trnP-GGG-psaJ 67729 68152 0 424 LSC 0.023585 10 0 85 158 no 1.000000 2 1.000000 NA 1.000000 60.000000 psaJ gene psaJ psaJ 68153 68287 1 135 LSC 0.000000 0 0 121 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_067 igs psaJ|rpl33 psaJ-rpl33 68288 68777 0 490 LSC 0.008529 4 21 256 19 no 1.000000 2 1.000000 NA 0.957143 51.900000 rpl33 gene rpl33 rpl33 68778 68978 1 201 LSC 0.004975 1 0 279 38 no 1.000000 2 1.000000 NA 1.000000 43.200000 IGS_068 igs rpl33|rps18 rpl33-rps18 68979 69546 0 568 LSC 0.037402 19 60 181 34 yes 1.000000 2 1.000000 NA 0.894366 69.900000 rps18 gene rps18 rps18 69547 69894 1 348 LSC 0.025862 9 0 23 24 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_069 igs rps18|rpl20 rps18-rpl20 69895 70109 0 215 LSC 0.014085 3 2 26 87 no 1.000000 2 1.000000 NA 0.990698 48.400000 rpl20 gene rpl20 rpl20 70110 70439 -1 330 LSC 0.015152 5 0 156 4 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_070 igs rpl20|rps12 rpl20-rps12 70440 71247 0 808 LSC 0.003713 3 0 47 158 no 1.000000 2 1.000000 NA 1.000000 49.400000 rps12_part1 gene rps12 rps12 71248 71361 -1 114 LSC 0.000000 0 0 300 44 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_071 igs rps12|clpP rps12-clpP 71362 71533 0 172 LSC 0.087209 15 0 300 34 yes 1.000000 2 1.000000 NA 1.000000 73.500000 clpP gene clpP clpP 71534 72921 -1 1388 LSC 0.056957 79 1 1 15 yes 1.000000 2 1.000000 NA 0.999280 73.500000 IGS_072 igs clpP|psbB clpP-psbB 72922 73359 0 438 LSC 0.014670 6 29 23 47 no 1.000000 2 1.000000 NA 0.933790 54.800000 psbB gene psbB psbB 73360 74886 1 1527 LSC 0.005894 9 0 71 86 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_073 igs psbB|psbT psbB-psbT 74887 75056 0 170 LSC 0.011765 2 0 285 144 no 1.000000 2 1.000000 NA 1.000000 55.100000 psbT gene psbT psbT 75057 75164 1 108 LSC 0.000000 0 0 5 36 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_074 igs psbT|psbN psbT-psbN 75165 75223 0 59 LSC 0.033898 2 0 113 144 no 1.000000 2 1.000000 NA 1.000000 65.500000 psbN gene psbN psbN 75224 75355 -1 132 LSC 0.000000 0 0 21 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_075 igs psbN|psbH psbN-psbH 75356 75453 0 98 LSC 0.040816 4 0 153 247 yes 1.000000 2 1.000000 NA 1.000000 72.400000 psbH gene psbH psbH 75454 75675 1 222 LSC 0.000000 0 0 55 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_076 igs psbH|petB psbH-petB 75676 75785 0 110 LSC 0.009091 1 0 277 211 no 1.000000 2 1.000000 NA 1.000000 57.700000 petB gene petB petB 75786 77229 1 1444 LSC 0.006925 10 0 84 300 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_077 igs petB|petD petB-petD 77230 77448 0 219 LSC 0.000000 0 0 102 103 no 0.000000 1 0.000000 NA 1.000000 26.400000 petD gene petD petD 77449 78642 1 1194 LSC 0.010110 12 7 300 24 no 1.000000 2 1.000000 NA 0.994137 51.900000 IGS_078 igs petD|rpoA petD-rpoA 78643 78807 0 165 LSC 0.012121 2 0 154 54 no 1.000000 2 1.000000 NA 1.000000 48.500000 rpoA gene rpoA rpoA 78808 79794 -1 987 LSC 0.007092 7 0 90 61 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_079 igs rpoA|rps11 rpoA-rps11 79795 79875 0 81 LSC 0.025000 2 1 26 171 no 1.000000 2 1.000000 NA 0.987654 55.000000 rps11 gene rps11 rps11 79876 80292 -1 417 LSC 0.021583 9 0 17 106 no 1.000000 2 1.000000 NA 1.000000 53.600000 IGS_080 igs rps11|rpl36 rps11-rpl36 80293 80419 0 127 LSC 0.007937 1 1 3 47 no 1.000000 2 1.000000 NA 0.992126 43.000000 rpl36 gene rpl36 rpl36 80420 80533 -1 114 LSC 0.008772 1 0 20 92 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_081 igs rpl36|rps8 rpl36-rps8 80534 81030 0 497 LSC 0.014085 7 0 66 129 no 1.000000 2 1.000000 NA 1.000000 54.700000 rps8 gene rps8 rps8 81031 81435 -1 405 LSC 0.009877 4 0 14 221 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_082 igs rps8|rpl14 rps8-rpl14 81436 81593 0 158 LSC 0.000000 0 1 25 63 no 1.000000 2 1.000000 NA 0.993671 40.000000 rpl14 gene rpl14 rpl14 81594 81962 -1 369 LSC 0.008130 3 0 183 130 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_083 igs rpl14|rpl16 rpl14-rpl16 81963 82065 0 103 LSC 0.000000 0 0 147 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 rpl16 gene rpl16 rpl16 82066 82503 -1 438 LSC 0.006849 3 0 250 246 no 1.000000 2 1.000000 NA 1.000000 59.300000 IGS_084 igs rpl16|rps3 rpl16-rps3 82504 82660 0 157 LSC 0.000000 0 0 228 89 no 0.000000 1 0.000000 NA 1.000000 25.400000 rps3 gene rps3 rps3 82661 83311 -1 651 LSC 0.010753 7 0 300 125 no 1.000000 2 1.000000 NA 1.000000 59.300000 IGS_085 igs rps3|rps19 rps3-rps19 83312 83810 0 499 LSC 0.008016 4 0 76 85 no 1.000000 2 1.000000 NA 1.000000 52.000000 rps19 gene rps19 rps19 83811 84089 -1 279 LSC 0.017921 5 0 10 300 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_086 igs rps19|rpl2 rps19-rpl2 84090 84150 0 61 IRb 0.000000 0 0 5 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 rpl2 gene rpl2 rpl2 84151 85655 -1 1505 IRb 0.001334 2 6 66 59 no 1.000000 2 1.000000 NA 0.996013 49.300000 IGS_087 igs rpl2|rpl23 rpl2-rpl23 85656 85673 0 18 IRb 0.000000 0 0 188 41 no 0.000000 1 0.000000 NA 1.000000 21.800000 rpl23 gene rpl23 rpl23 85674 85955 -1 282 IRb 0.003546 1 0 206 25 no 1.000000 2 1.000000 NA 1.000000 41.400000 IGS_088 igs rpl23|trnI-CAU rpl23-trnI-CAU 85956 86300 0 345 IRb 0.042105 8 155 240 142 yes 1.000000 2 1.000000 NA 0.550725 65.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 86301 86374 -1 74 IRb 0.000000 0 0 1 68 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_089 igs trnI-CAU|ycf2 trnI-CAU-ycf2 86375 86456 0 82 IRb 0.178571 10 26 75 13 yes 1.000000 2 1.000000 NA 0.682927 70.800000 ycf2 gene ycf2 ycf2 86457 93386 1 6930 IRb 0.004816 33 78 2 118 no 1.000000 2 1.000000 NA 0.988745 41.500000 IGS_090 igs ycf2|trnL-CAA ycf2-trnL-CAA 93387 93795 0 409 IRb 0.007335 3 0 300 121 no 1.000000 2 1.000000 NA 1.000000 53.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 93796 93876 -1 81 IRb 0.000000 0 0 65 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_091 igs trnL-CAA|ndhB trnL-CAA-ndhB 93877 94303 0 427 IRb 0.018735 8 0 146 300 no 1.000000 2 1.000000 NA 1.000000 61.900000 ndhB gene ndhB ndhB 94304 96526 -1 2223 IRb 0.001802 4 3 58 50 no 1.000000 2 1.000000 NA 0.998650 47.200000 IGS_092 igs ndhB|rps7 ndhB-rps7 96527 96849 0 323 IRb 0.006192 2 0 300 70 no 1.000000 2 1.000000 NA 1.000000 46.800000 rps7 gene rps7 rps7 96850 97317 -1 468 IRb 0.010684 5 0 198 105 no 1.000000 2 1.000000 NA 1.000000 55.000000 IGS_093 igs rps7|rps12 rps7-rps12 97318 97376 0 59 IRb 0.000000 0 0 201 46 no 0.000000 1 0.000000 NA 1.000000 22.200000 rps12_part2 gene rps12 rps12 97377 97622 -1 246 IRb 0.004065 1 0 260 300 no 1.000000 2 1.000000 NA 1.000000 54.800000 IGS_094 igs rps12|trnV-GAC rps12-trnV-GAC 97623 99105 0 1483 IRb 0.002044 3 15 199 300 no 1.000000 2 1.000000 NA 0.989885 60.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 99106 99177 1 72 IRb 0.000000 0 0 47 300 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_095 igs trnV-GAC|rrn16 trnV-GAC-rrn16 99178 99404 0 227 IRb 0.000000 0 0 119 248 no 0.000000 1 0.000000 NA 1.000000 27.700000 rrn16 rRNA rrn16 rrn16 99405 100895 1 1491 IRb 0.002012 3 0 300 185 no 1.000000 2 1.000000 NA 1.000000 58.800000 IGS_096 igs rrn16|trnI-GAU rrn16-trnI-GAU 100896 101187 0 292 IRb 0.003425 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101188 101229 1 42 IRb 0.000000 0 0 106 300 no 0.000000 1 0.000000 NA 1.000000 26.700000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102177 102211 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_099 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102212 102278 0 67 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102279 102316 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103110 103144 1 35 IRb 0.000000 0 0 30 300 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_102 igs trnA-UGC|trnR-ACG trnA-UGC-trnR-ACG 103145 106919 0 3775 IRb 0.001857 7 5 65 100 no 1.000000 2 1.000000 NA 0.998675 45.500000 trnR-ACG tRNA trnR-ACG trnR-ACG 106920 106993 1 74 IRb 0.000000 0 0 258 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_103 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 106994 107641 0 648 IRb 0.013201 8 42 300 29 no 1.000000 2 1.000000 NA 0.935185 57.800000 trnN-GUU tRNA trnN-GUU trnN-GUU 107642 107713 -1 72 IRb 0.013889 1 0 300 86 no 1.000000 2 1.000000 NA 1.000000 51.900000 IGS_104 igs trnN-GUU|ndhF trnN-GUU-ndhF 107714 107996 0 283 IRb 0.010601 3 0 42 1 no 1.000000 2 1.000000 NA 1.000000 43.700000 ndhF gene ndhF ndhF 107997 110228 -1 2232 SSC 0.005864 13 15 78 105 no 1.000000 2 1.000000 NA 0.993280 52.100000 IGS_105 igs ndhF|trnL-UAG ndhF-trnL-UAG 110229 112651 0 2423 SSC 0.016972 37 243 165 134 no 1.000000 2 1.000000 NA 0.899711 64.900000 trnL-UAG tRNA trnL-UAG trnL-UAG 112652 112731 1 80 SSC 0.000000 0 0 27 54 no 0.000000 1 0.000000 NA 1.000000 20.800000 IGS_106 igs trnL-UAG|ccsA trnL-UAG-ccsA 112732 112820 0 89 SSC 0.162791 14 3 107 91 yes 1.000000 2 1.000000 NA 0.966292 82.600000 ccsA gene ccsA ccsA 112821 113786 1 966 SSC 0.006211 6 0 6 46 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_107 igs ccsA|ndhD ccsA-ndhD 113787 114038 0 252 SSC 0.023810 6 0 144 141 no 1.000000 2 1.000000 NA 1.000000 61.800000 ndhD gene ndhD ndhD 114039 115541 -1 1503 SSC 0.003327 5 0 77 210 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_108 igs ndhD|psaC ndhD-psaC 115542 115685 0 144 SSC 0.000000 0 1 300 66 no 1.000000 2 1.000000 NA 0.993056 43.100000 psaC gene psaC psaC 115686 115931 -1 246 SSC 0.004065 1 0 300 76 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_109 igs psaC|ndhE psaC-ndhE 115932 116187 0 256 SSC 0.013216 3 29 179 271 no 1.000000 2 1.000000 NA 0.886719 61.400000 ndhE gene ndhE ndhE 116188 116493 -1 306 SSC 0.006536 2 0 130 26 no 1.000000 2 1.000000 NA 1.000000 43.300000 IGS_110 igs ndhE|ndhG ndhE-ndhG 116494 116773 0 280 SSC 0.032143 9 0 3 81 no 1.000000 2 1.000000 NA 1.000000 56.200000 ndhG gene ndhG ndhG 116774 117337 -1 564 SSC 0.008865 5 0 5 71 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_111 igs ndhG|ndhI ndhG-ndhI 117338 117608 0 271 SSC 0.014815 4 1 9 244 no 1.000000 2 1.000000 NA 0.996310 47.000000 ndhI gene ndhI ndhI 117609 118112 -1 504 SSC 0.007937 4 0 104 7 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_112 igs ndhI|ndhA ndhI-ndhA 118113 118194 0 82 SSC 0.012195 1 0 5 214 no 1.000000 2 1.000000 NA 1.000000 44.900000 ndhA gene ndhA ndhA 118195 120353 -1 2159 SSC 0.008870 19 17 74 46 no 1.000000 2 1.000000 NA 0.992126 51.700000 IGS_113 igs ndhA|ndhH ndhA-ndhH 120354 120354 0 1 SSC 0.000000 0 0 18 45 no 0.000000 1 0.000000 NA 1.000000 20.100000 ndhH gene ndhH ndhH 120355 121536 -1 1182 SSC 0.005076 6 0 19 46 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_114 igs ndhH|rps15 ndhH-rps15 121537 121639 0 103 SSC 0.019417 2 0 8 34 no 1.000000 2 1.000000 NA 1.000000 49.300000 rps15 gene rps15 rps15 121640 121912 -1 273 SSC 0.010989 3 0 37 42 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_115 igs rps15|ycf1 rps15-ycf1 121913 122310 0 398 SSC 0.028571 11 13 125 184 yes 1.000000 2 1.000000 NA 0.967337 68.400000 ycf1 gene ycf1 ycf1 122311 127869 -1 5559 SSC 0.020482 113 42 61 17 yes 1.000000 2 1.000000 NA 0.992445 51.300000 IGS_116 igs ycf1|trnN-GUU ycf1-trnN-GUU 127870 128381 0 512 IRa 0.063063 28 68 21 96 yes 1.000000 2 1.000000 NA 0.867188 75.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 128382 128453 1 72 IRa 0.000000 0 0 134 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_117 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 128454 129101 0 648 IRa 0.014851 9 42 206 300 yes 1.000000 2 1.000000 NA 0.935185 71.600000 trnR-ACG tRNA trnR-ACG trnR-ACG 129102 129175 -1 74 IRa 0.000000 0 0 26 258 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_118 igs trnR-ACG|trnA-UGC trnR-ACG-trnA-UGC 129176 132950 0 3775 IRa 0.001857 7 5 100 65 no 1.000000 2 1.000000 NA 0.998675 45.500000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 132951 132985 -1 35 IRa 0.000000 0 0 300 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 133779 133816 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_121 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 133817 133883 0 67 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 133884 133918 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 134866 134907 -1 42 IRa 0.000000 0 0 300 106 no 0.000000 1 0.000000 NA 1.000000 26.700000 IGS_124 igs trnI-GAU|rrn16 trnI-GAU-rrn16 134908 135199 0 292 IRa 0.003425 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 rrn16 rRNA rrn16 rrn16 135200 136690 -1 1491 IRa 0.002012 3 0 185 300 no 1.000000 2 1.000000 NA 1.000000 58.800000 IGS_125 igs rrn16|trnV-GAC rrn16-trnV-GAC 136691 136917 0 227 IRa 0.000000 0 0 248 119 no 0.000000 1 0.000000 NA 1.000000 27.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 136918 136989 -1 72 IRa 0.000000 0 0 300 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_126 igs trnV-GAC|rps7 trnV-GAC-rps7 136990 138777 0 1788 IRa 0.002256 4 15 300 201 no 1.000000 2 1.000000 NA 0.991611 60.300000 rps7 gene rps7 rps7 138778 139245 1 468 IRa 0.010684 5 0 105 198 no 1.000000 2 1.000000 NA 1.000000 55.000000 IGS_127 igs rps7|ndhB rps7-ndhB 139246 139568 0 323 IRa 0.006192 2 0 70 300 no 1.000000 2 1.000000 NA 1.000000 46.800000 ndhB gene ndhB ndhB 139569 141791 1 2223 IRa 0.001802 4 3 50 58 no 1.000000 2 1.000000 NA 0.998650 47.200000 IGS_128 igs ndhB|trnL-CAA ndhB-trnL-CAA 141792 142218 0 427 IRa 0.018735 8 0 300 146 no 1.000000 2 1.000000 NA 1.000000 61.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 142219 142299 1 81 IRa 0.000000 0 0 40 65 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_129 igs trnL-CAA|ycf2 trnL-CAA-ycf2 142300 142708 0 409 IRa 0.007335 3 0 121 300 no 1.000000 2 1.000000 NA 1.000000 53.100000 ycf2 gene ycf2 ycf2 142709 149638 -1 6930 IRa 0.004816 33 78 118 2 no 1.000000 2 1.000000 NA 0.988745 41.500000 IGS_130 igs ycf2|trnI-CAU ycf2-trnI-CAU 149639 149720 0 82 IRa 0.178571 10 26 13 75 yes 1.000000 2 1.000000 NA 0.682927 70.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 149721 149794 1 74 IRa 0.000000 0 0 68 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_131 igs trnI-CAU|rpl23 trnI-CAU-rpl23 149795 150139 0 345 IRa 0.042105 8 155 142 240 yes 1.000000 2 1.000000 NA 0.550725 65.300000 rpl23 gene rpl23 rpl23 150140 150421 1 282 IRa 0.003546 1 0 25 206 no 1.000000 2 1.000000 NA 1.000000 41.400000 IGS_132 igs rpl23|rpl2 rpl23-rpl2 150422 150439 0 18 IRa 0.000000 0 0 41 188 no 0.000000 1 0.000000 NA 1.000000 21.800000 rpl2 gene rpl2 rpl2 150440 151944 1 1505 IRa 0.002001 3 6 59 91 no 1.000000 2 1.000000 NA 0.996013 49.700000 IGS_133 igs rpl2|trnH-GUG rpl2-trnH-GUG 151945 145 0 203 LSC 0.050000 5 103 213 81 no 1.000000 2 1.000000 NA 0.492611 62.800000