feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 4 78 -1 75 LSC 0.000000 0 0 300 96 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 79 485 0 407 LSC 0.003325 2 6 300 173 no 1.000000 3 1.000000 0.003325 0.985258 56.200000 psbA gene psbA psbA 486 1547 -1 1062 LSC 0.000628 1 0 267 102 no 0.333333 2 0.500000 0.000628 1.000000 39.300000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1548 1810 0 263 LSC 0.002535 1 8 300 207 no 0.333333 2 0.500000 0.002614 1.000000 45.100000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1811 1845 -1 35 LSC 0.000000 0 0 160 172 no 0.000000 1 0.000000 0.000000 1.000000 30.800000 matK gene matK matK 2130 3641 -1 1512 LSC 0.000441 1 0 111 300 no 0.333333 2 0.500000 0.000441 1.000000 39.800000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3642 4400 0 759 LSC 0.001757 2 0 300 189 no 1.000000 3 1.000000 0.001757 1.000000 59.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4401 4437 -1 37 LSC 0.000000 0 0 200 152 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4438 5256 0 819 LSC 0.004884 6 0 237 300 yes 1.000000 3 1.000000 0.004884 1.000000 61.900000 rps16 gene rps16 rps16 5257 6350 -1 1094 LSC 0.000609 1 0 39 297 no 0.333333 2 0.500000 0.000609 1.000000 34.600000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6351 7319 0 969 LSC 0.002752 4 8 300 300 yes 1.000000 3 1.000000 0.002769 1.000000 61.500000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7320 7391 -1 72 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7392 7747 0 356 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.900000 psbK gene psbK psbK 7748 7927 1 180 LSC 0.000000 0 0 300 268 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_009 igs psbK|psbI psbK-psbI 7928 8378 0 451 LSC 0.004444 3 1 300 121 yes 1.000000 3 1.000000 0.004444 0.997783 52.800000 psbI gene psbI psbI 8379 8489 1 111 LSC 0.000000 0 0 105 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8490 8629 0 140 LSC 0.009524 2 0 216 300 no 1.000000 3 1.000000 0.009524 1.000000 58.600000 trnS-GCU tRNA trnS-GCU trnS-GCU 8630 8717 -1 88 LSC 0.000000 0 0 49 300 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_011 igs trnS-GCU|trnC-GCA trnS-GCU-trnC-GCA 8718 9451 0 734 LSC 0.002725 3 1 137 300 no 0.333333 2 0.500000 0.002729 1.000000 43.400000 trnC-GCA tRNA trnC-GCA trnC-GCA 9452 9522 1 71 LSC 0.000000 0 0 219 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_012 igs trnC-GCA|petN trnC-GCA-petN 9523 10316 0 794 LSC 0.005907 7 12 290 257 yes 1.000000 3 1.000000 0.005946 0.994962 64.100000 petN gene petN petN 10317 10406 1 90 LSC 0.000000 0 0 59 167 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_013 igs petN|psbM petN-psbM 10407 10906 0 500 LSC 0.008000 6 0 149 300 no 0.333333 2 0.500000 0.008000 1.000000 45.400000 psbM gene psbM psbM 10907 11011 -1 105 LSC 0.000000 0 0 142 300 no 0.000000 1 0.000000 0.000000 1.000000 29.400000 IGS_014 igs psbM|trnD-GUC psbM-trnD-GUC 11012 11652 0 641 LSC 0.001040 1 0 247 300 no 0.333333 2 0.500000 0.001040 1.000000 46.900000 trnD-GUC tRNA trnD-GUC trnD-GUC 11653 11726 -1 74 LSC 0.000000 0 0 287 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_015 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 11727 11818 0 92 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 11819 11902 -1 84 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_016 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 11903 12105 0 203 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnE-UUC tRNA trnE-UUC trnE-UUC 12106 12176 -1 71 LSC 0.000000 0 0 300 267 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_017 igs trnE-UUC|rpoB trnE-UUC-rpoB 12177 12943 0 767 LSC 0.000869 1 0 300 300 no 0.333333 2 0.500000 0.000869 1.000000 46.800000 rpoB gene rpoB rpoB 12944 16126 1 3183 LSC 0.000419 2 0 300 300 no 0.333333 2 0.500000 0.000419 1.000000 43.100000 IGS_018 igs rpoB|rpoC2 rpoB-rpoC2 16127 19052 0 2926 LSC 0.001367 6 0 300 300 no 1.000000 3 1.000000 0.001367 1.000000 56.700000 rpoC2 gene rpoC2 rpoC2 19053 23195 1 4143 LSC 0.000483 3 0 117 196 no 1.000000 3 1.000000 0.000483 1.000000 47.900000 IGS_019 igs rpoC2|rps2 rpoC2-rps2 23196 23418 0 223 LSC 0.005979 2 1 300 300 no 1.000000 3 1.000000 0.005993 1.000000 56.800000 rps2 gene rps2 rps2 23419 24129 1 711 LSC 0.000000 0 0 25 300 no 0.000000 1 0.000000 0.000000 1.000000 26.900000 IGS_020 igs rps2|atpI rps2-atpI 24130 24344 0 215 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpI gene atpI atpI 24345 25088 1 744 LSC 0.000896 1 0 300 300 no 0.333333 2 0.500000 0.000896 1.000000 46.800000 IGS_021 igs atpI|atpH atpI-atpH 25089 26182 0 1094 LSC 0.000610 1 1 300 283 yes 1.000000 3 1.000000 0.000610 0.999086 59.200000 atpH gene atpH atpH 26183 26428 1 246 LSC 0.000000 0 0 114 37 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 IGS_022 igs atpH|atpF atpH-atpF 26429 26820 0 392 LSC 0.003401 2 0 300 300 no 0.333333 2 0.500000 0.003401 1.000000 44.100000 atpF gene atpF atpF 26821 28080 1 1260 LSC 0.001058 2 0 300 300 no 0.333333 2 0.500000 0.001058 1.000000 46.900000 IGS_023 igs atpF|atpA atpF-atpA 28081 28153 0 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpA gene atpA atpA 28154 29680 1 1527 LSC 0.000000 0 0 300 279 no 0.000000 1 0.000000 0.000000 1.000000 39.900000 IGS_024 igs atpA|trnR-UCU atpA-trnR-UCU 29681 29796 0 116 LSC 0.000000 0 0 300 163 no 0.000000 1 0.000000 0.000000 1.000000 31.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 29797 29868 -1 72 LSC 0.000000 0 0 300 91 no 0.000000 1 0.000000 0.000000 1.000000 25.600000 IGS_025 igs trnR-UCU|psbD trnR-UCU-psbD 29869 32350 0 2482 LSC 0.001612 6 9 300 300 no 1.000000 3 1.000000 0.001616 1.000000 58.100000 psbD gene psbD psbD 32351 33412 1 1062 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 psbC gene psbC psbC 33360 34781 1 1422 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_027 igs psbC|trnS-UGA psbC-trnS-UGA 34782 35009 0 228 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 35010 35092 -1 83 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_028 igs trnS-UGA|psbZ trnS-UGA-psbZ 35093 35426 0 334 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.500000 psbZ gene psbZ psbZ 35427 35615 1 189 LSC 0.000000 0 0 300 293 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_029 igs psbZ|trnG-UCC psbZ-trnG-UCC 35616 35915 0 300 LSC 0.002222 1 0 300 129 no 0.333333 2 0.500000 0.002222 1.000000 36.100000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 35916 35953 1 38 LSC 0.000000 0 0 6 91 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 35949 35986 1 38 LSC 0.000000 0 0 39 58 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 IGS_032 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 35987 36187 0 201 LSC 0.003317 1 0 77 105 no 0.333333 2 0.500000 0.003317 1.000000 32.900000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36188 36261 -1 74 LSC 0.000000 0 0 142 31 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_033 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36262 36411 0 150 LSC 0.004444 1 0 216 300 no 0.333333 2 0.500000 0.004444 1.000000 42.800000 rps14 gene rps14 rps14 36412 36714 -1 303 LSC 0.000000 0 0 118 300 no 0.000000 1 0.000000 0.000000 1.000000 27.700000 IGS_034 igs rps14|psaB rps14-psaB 36715 36847 0 133 LSC 0.000000 0 0 300 201 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaB gene psaB psaB 36848 39052 -1 2205 LSC 0.000302 1 0 300 300 no 0.333333 2 0.500000 0.000302 1.000000 45.000000 IGS_035 igs psaB|psaA psaB-psaA 39053 39077 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 39078 41330 -1 2253 LSC 0.000296 1 0 300 300 no 0.333333 2 0.500000 0.000296 1.000000 44.900000 IGS_036 igs psaA|ycf3 psaA-ycf3 41331 42058 0 728 LSC 0.003663 4 0 300 300 yes 1.000000 3 1.000000 0.003663 1.000000 61.100000 ycf3 gene ycf3 ycf3 42059 44002 -1 1944 LSC 0.000686 2 0 69 60 no 0.333333 2 0.500000 0.000686 1.000000 35.300000 IGS_037 igs ycf3|trnS-GGA ycf3-trnS-GGA 44003 44898 0 896 LSC 0.001488 2 0 236 97 no 1.000000 3 1.000000 0.001488 1.000000 52.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 44899 44984 1 86 LSC 0.000000 0 0 300 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_038 igs trnS-GGA|rps4 trnS-GGA-rps4 44985 45290 0 306 LSC 0.004357 2 0 300 300 no 1.000000 3 1.000000 0.004357 1.000000 55.400000 rps4 gene rps4 rps4 45291 45896 -1 606 LSC 0.000000 0 0 12 250 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_039 igs rps4|trnT-UGU rps4-trnT-UGU 45897 46253 0 357 LSC 0.001867 1 1 300 300 no 0.333333 2 0.500000 0.001873 1.000000 42.700000 trnT-UGU tRNA trnT-UGU trnT-UGU 46254 46326 -1 73 LSC 0.000000 0 0 106 300 no 0.000000 1 0.000000 0.000000 1.000000 26.700000 IGS_040 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 46327 46942 0 616 LSC 0.003247 3 0 179 300 no 1.000000 3 1.000000 0.003247 1.000000 59.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 46943 46979 1 37 LSC 0.000000 0 0 12 300 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47420 47469 1 50 LSC 0.000000 0 0 300 5 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_043 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47470 47816 0 347 LSC 0.003842 2 0 300 300 no 1.000000 3 1.000000 0.003842 1.000000 55.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 47817 47890 1 74 LSC 0.000000 0 0 84 300 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 IGS_044 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47891 48618 0 728 LSC 0.004579 5 16 158 300 yes 1.000000 3 1.000000 0.004651 1.000000 61.000000 ndhJ gene ndhJ ndhJ 48619 49095 -1 477 LSC 0.001398 1 0 101 300 no 0.333333 2 0.500000 0.001398 1.000000 37.200000 IGS_045 igs ndhJ|ndhK ndhJ-ndhK 49096 49200 0 105 LSC 0.000000 0 0 152 300 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 ndhK gene ndhK ndhK 49201 49878 -1 678 LSC 0.000000 0 0 257 121 no 0.000000 1 0.000000 0.000000 1.000000 34.100000 IGS_046 igs ndhK|ndhC ndhK-ndhC 49879 49930 0 52 LSC 0.000000 0 0 300 69 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 ndhC gene ndhC ndhC 49931 50293 -1 363 LSC 0.001837 1 0 300 269 no 0.333333 2 0.500000 0.001837 1.000000 42.500000 IGS_047 igs ndhC|trnV-UAC ndhC-trnV-UAC 50294 51046 0 753 LSC 0.009739 10 65 293 300 yes 1.000000 3 1.000000 0.008414 1.000000 70.100000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 51047 51083 -1 37 LSC 0.000000 0 0 29 300 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 51657 51694 -1 38 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_050 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 51695 51869 0 175 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 51870 51942 1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_051 igs trnM-CAU|atpE trnM-CAU-atpE 51943 52145 0 203 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpE gene atpE atpE 52146 52547 -1 402 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.900000 atpB gene atpB atpB 52544 54040 -1 1497 LSC 0.000000 0 0 300 23 no 0.000000 1 0.000000 0.000000 1.000000 26.700000 IGS_053 igs atpB|rbcL atpB-rbcL 54041 54764 0 724 LSC 0.000921 1 9 300 104 no 0.333333 2 0.500000 0.000932 1.000000 41.100000 rbcL gene rbcL rbcL 54765 56243 1 1479 LSC 0.003155 7 0 300 300 yes 1.000000 3 1.000000 0.003155 1.000000 60.800000 IGS_054 igs rbcL|accD rbcL-accD 56244 56822 0 579 LSC 0.001151 1 1 113 77 no 0.333333 2 0.500000 0.001153 1.000000 37.500000 accD gene accD accD 56823 58268 1 1446 LSC 0.000922 2 0 62 203 no 0.333333 2 0.500000 0.000922 1.000000 36.500000 IGS_055 igs accD|psaI accD-psaI 58269 58934 0 666 LSC 0.010010 10 0 252 145 yes 1.000000 3 1.000000 0.010010 1.000000 61.000000 psaI gene psaI psaI 58935 59045 1 111 LSC 0.000000 0 0 166 34 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_056 igs psaI|ycf4 psaI-ycf4 59046 59435 0 390 LSC 0.009402 5 0 277 300 yes 1.000000 3 1.000000 0.009402 1.000000 60.200000 ycf4 gene ycf4 ycf4 59436 59990 1 555 LSC 0.000000 0 0 33 201 no 0.000000 1 0.000000 0.000000 1.000000 26.500000 IGS_057 igs ycf4|cemA ycf4-cemA 59991 60370 0 380 LSC 0.004386 2 7 300 300 no 1.000000 3 1.000000 0.002665 1.000000 58.900000 cemA gene cemA cemA 60371 61060 1 690 LSC 0.000966 1 0 52 39 no 0.333333 2 0.500000 0.000966 1.000000 34.800000 IGS_058 igs cemA|petA cemA-petA 61061 61304 0 244 LSC 0.005464 2 0 300 300 no 1.000000 3 1.000000 0.005464 1.000000 56.000000 petA gene petA petA 61305 62267 1 963 LSC 0.000000 0 0 115 288 no 0.000000 1 0.000000 0.000000 1.000000 33.600000 IGS_059 igs petA|psbJ petA-psbJ 62268 63030 0 763 LSC 0.001754 2 4 300 300 yes 1.000000 3 1.000000 0.001756 0.996068 60.400000 psbJ gene psbJ psbJ 63031 63153 -1 123 LSC 0.000000 0 0 260 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_060 igs psbJ|psbL psbJ-psbL 63154 63301 0 148 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbL gene psbL psbL 63302 63418 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_061 igs psbL|psbF psbL-psbF 63419 63440 0 22 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 63441 63560 -1 120 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_062 igs psbF|psbE psbF-psbE 63561 63569 0 9 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 63570 63821 -1 252 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_063 igs psbE|petL psbE-petL 63822 65047 0 1226 LSC 0.001631 3 11 300 26 no 1.000000 3 1.000000 0.001644 1.000000 47.800000 petL gene petL petL 65048 65143 1 96 LSC 0.006944 1 0 300 300 no 0.333333 2 0.500000 0.006944 1.000000 44.400000 IGS_064 igs petL|petG petL-petG 65144 65296 0 153 LSC 0.000000 0 0 69 300 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 petG gene petG petG 65297 65410 1 114 LSC 0.000000 0 0 222 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_065 igs petG|trnW-CCA petG-trnW-CCA 65411 65527 0 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 65528 65600 -1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_066 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 65601 65756 0 156 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnP-UGG tRNA trnP-UGG trnP-UGG 65757 65830 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_067 igs trnP-UGG|psaJ trnP-UGG-psaJ 65831 66170 0 340 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.600000 psaJ gene psaJ psaJ 66171 66305 1 135 LSC 0.000000 0 0 300 212 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_068 igs psaJ|rpl33 psaJ-rpl33 66306 66735 0 430 LSC 0.001550 1 0 300 300 no 0.333333 2 0.500000 0.001550 1.000000 43.700000 rpl33 gene rpl33 rpl33 66736 66936 1 201 LSC 0.000000 0 0 217 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_069 igs rpl33|rps18 rpl33-rps18 66937 67123 0 187 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps18 gene rps18 rps18 67124 67429 1 306 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.900000 IGS_070 igs rps18|rpl20 rps18-rpl20 67430 67713 0 284 LSC 0.000000 0 5 300 300 no 0.333333 2 0.500000 0.000000 1.000000 42.000000 rpl20 gene rpl20 rpl20 67714 68076 -1 363 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.100000 IGS_071 igs rpl20|rps12 rpl20-rps12 68077 68818 0 742 LSC 0.000000 0 0 300 60 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 rps12_part1 gene rps12 rps12 68819 68932 -1 114 LSC 0.005848 1 0 300 300 no 0.333333 2 0.500000 0.005848 1.000000 43.700000 IGS_072 igs rps12|clpP rps12-clpP 68933 69106 0 174 LSC 0.000000 0 0 53 300 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 clpP gene clpP clpP 69107 71131 -1 2025 LSC 0.000990 3 6 227 169 no 1.000000 3 1.000000 0.000990 0.997531 56.200000 IGS_073 igs clpP|psbB clpP-psbB 71132 71592 0 461 LSC 0.001456 1 4 300 300 no 1.000000 3 1.000000 0.001457 0.993492 57.600000 psbB gene psbB psbB 71593 73119 1 1527 LSC 0.000437 1 0 291 281 no 0.333333 2 0.500000 0.000437 1.000000 46.500000 IGS_074 igs psbB|psbT psbB-psbT 73120 73313 0 194 LSC 0.000000 0 1 300 87 no 0.333333 2 0.500000 0.000000 0.994845 32.000000 psbT gene psbT psbT 73314 73415 1 102 LSC 0.006536 1 1 300 300 no 0.333333 2 0.500000 0.006601 1.000000 45.300000 IGS_075 igs psbT|psbN psbT-psbN 73416 73485 0 70 LSC 0.000000 0 0 14 300 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 psbN gene psbN psbN 73486 73617 -1 132 LSC 0.000000 0 0 84 300 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 IGS_076 igs psbN|psbH psbN-psbH 73618 73701 0 84 LSC 0.000000 0 0 216 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbH gene psbH psbH 73702 73941 1 240 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_077 igs psbH|petB psbH-petB 73942 74065 0 124 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petB gene petB petB 74066 75481 1 1416 LSC 0.000471 1 0 300 300 no 0.333333 2 0.500000 0.000471 1.000000 46.600000 IGS_078 igs petB|petD petB-petD 75482 75676 0 195 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petD gene petD petD 75677 76877 1 1201 LSC 0.001110 2 0 300 25 no 1.000000 3 1.000000 0.001110 1.000000 46.300000 IGS_079 igs petD|rpoA petD-rpoA 76878 77072 0 195 LSC 0.006838 2 1 300 300 no 0.333333 2 0.500000 0.006873 1.000000 44.900000 rpoA gene rpoA rpoA 77073 78080 -1 1008 LSC 0.000000 0 0 47 300 no 0.000000 1 0.000000 0.000000 1.000000 28.500000 IGS_080 igs rpoA|rps11 rpoA-rps11 78081 78160 0 80 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps11 gene rps11 rps11 78161 78571 -1 411 LSC 0.000000 0 0 300 237 no 0.000000 1 0.000000 0.000000 1.000000 36.100000 IGS_081 igs rps11|rpl36 rps11-rpl36 78572 78676 0 105 LSC 0.000000 0 0 300 132 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 rpl36 gene rpl36 rpl36 78677 78790 -1 114 LSC 0.000000 0 0 300 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_082 igs rpl36|infA rpl36-infA 78791 78904 0 114 LSC 0.005848 1 0 300 300 no 0.333333 2 0.500000 0.005848 1.000000 43.700000 infA gene infA infA 78905 79138 -1 234 LSC 0.000000 0 0 95 295 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_083 igs infA|rps8 infA-rps8 79139 79259 0 121 LSC 0.000000 0 0 300 174 no 0.000000 1 0.000000 0.000000 1.000000 31.800000 rps8 gene rps8 rps8 79260 79664 -1 405 LSC 0.001646 1 0 300 203 no 0.333333 2 0.500000 0.001646 1.000000 43.200000 IGS_084 igs rps8|rpl14 rps8-rpl14 79665 79864 0 200 LSC 0.000000 0 0 230 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 rpl14 gene rpl14 rpl14 79865 80233 -1 369 LSC 0.001807 1 0 300 84 no 0.333333 2 0.500000 0.001807 1.000000 33.900000 IGS_085 igs rpl14|rpl16 rpl14-rpl16 80234 80351 0 118 LSC 0.005650 1 2 300 300 no 1.000000 3 1.000000 0.005698 1.000000 58.000000 rpl16 gene rpl16 rpl16 80352 80711 -1 360 LSC 0.000000 0 0 33 220 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_086 igs rpl16|rps3 rpl16-rps3 80712 81947 0 1236 LSC 0.002157 4 0 300 297 yes 1.000000 3 1.000000 0.002157 1.000000 60.100000 rps3 gene rps3 rps3 81948 82604 -1 657 LSC 0.001015 1 0 128 38 no 0.333333 2 0.500000 0.001015 1.000000 34.700000 rpl22 gene rpl22 rpl22 82589 83059 -1 471 LSC 0.002831 2 0 300 106 no 1.000000 3 1.000000 0.002831 1.000000 50.800000 IGS_088 igs rpl22|rps19 rpl22-rps19 83060 83144 0 85 LSC 0.000000 0 0 116 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 rps19 gene rps19 rps19 83145 83423 -1 279 LSC 0.002389 1 0 201 300 no 0.333333 2 0.500000 0.002389 1.000000 41.500000 IGS_089 igs rps19|rpl2 rps19-rpl2 83424 83476 0 53 IRb 0.000000 0 0 257 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl2 gene rpl2 rpl2 83477 84971 -1 1495 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_090 igs rpl2|rpl23 rpl2-rpl23 84972 84989 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 84990 85271 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_091 igs rpl23|trnI-CAU rpl23-trnI-CAU 85272 85436 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 85437 85510 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_092 igs trnI-CAU|ycf2 trnI-CAU-ycf2 85511 85621 0 111 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf2 gene ycf2 ycf2 85622 92290 1 6669 IRb 0.000200 2 0 300 300 no 1.000000 3 1.000000 0.000200 1.000000 52.600000 IGS_093 igs ycf2|trnL-CAA ycf2-trnL-CAA 92291 92717 0 427 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.400000 trnL-CAA tRNA trnL-CAA trnL-CAA 92718 92798 -1 81 IRb 0.000000 0 0 300 238 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_094 igs trnL-CAA|ndhB trnL-CAA-ndhB 92799 93374 0 576 IRb 0.001157 1 0 300 300 no 0.333333 2 0.500000 0.001157 1.000000 46.500000 ndhB gene ndhB ndhB 93375 95578 -1 2204 IRb 0.000302 1 0 300 300 no 0.333333 2 0.500000 0.000302 1.000000 45.000000 IGS_095 igs ndhB|rps7 ndhB-rps7 95579 95867 0 289 IRb 0.000000 0 0 92 300 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 rps7 gene rps7 rps7 95868 96335 -1 468 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_096 igs rps7|rps12 rps7-rps12 96336 96388 0 53 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps12_part2 gene rps12 rps12 96389 97176 -1 788 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_097 igs rps12|ycf15 rps12-ycf15 97177 98134 0 958 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf15 gene ycf15 ycf15 98135 98326 -1 192 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_098 igs ycf15|trnV-GAC ycf15-trnV-GAC 98327 99006 0 680 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 99007 99078 1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_099 igs trnV-GAC|trnI-GAU trnV-GAC-trnI-GAU 99079 101087 0 2009 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.900000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101088 101129 1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 101902 101936 1 35 IRb 0.000000 0 0 298 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_102 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 101937 102000 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102001 102038 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 102860 102894 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_105 igs trnA-UGC|trnR-ACG trnA-UGC-trnR-ACG 102895 106675 0 3781 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 106676 106749 1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_106 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 106750 107213 0 464 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 107214 107286 -1 73 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_107 igs trnN-GUU|ycf1 trnN-GUU-ycf1 107287 107613 0 327 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.300000 ycf1 gene ycf1 ycf1 107614 108207 1 594 IRb 0.000000 0 0 300 5 no 0.000000 1 0.000000 0.000000 1.000000 25.200000 ndhF gene ndhF ndhF 108204 110429 -1 2226 SSC 0.001797 6 0 300 169 no 1.000000 3 1.000000 0.001797 1.000000 56.100000 IGS_109 igs ndhF|rpl32 ndhF-rpl32 110430 111478 0 1049 SSC 0.002542 4 1 300 300 yes 1.000000 3 1.000000 0.002543 1.000000 60.500000 rpl32 gene rpl32 rpl32 111479 111643 1 165 SSC 0.000000 0 0 126 149 no 0.000000 1 0.000000 0.000000 1.000000 28.200000 IGS_110 igs rpl32|trnL-UAG rpl32-trnL-UAG 111644 112431 0 788 SSC 0.005930 7 1 291 300 yes 1.000000 3 1.000000 0.005930 0.998731 62.600000 trnL-UAG tRNA trnL-UAG trnL-UAG 112432 112511 1 80 SSC 0.000000 0 0 294 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_111 igs trnL-UAG|ccsA trnL-UAG-ccsA 112512 112627 0 116 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ccsA gene ccsA ccsA 112628 113596 1 969 SSC 0.000688 1 0 300 300 no 0.333333 2 0.500000 0.000688 1.000000 46.700000 IGS_112 igs ccsA|ndhD ccsA-ndhD 113597 113870 0 274 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhD gene ndhD ndhD 113871 115391 -1 1521 SSC 0.000438 1 0 300 234 no 0.333333 2 0.500000 0.000438 1.000000 46.500000 IGS_113 igs ndhD|psaC ndhD-psaC 115392 115487 0 96 SSC 0.000000 0 0 300 138 no 0.000000 1 0.000000 0.000000 1.000000 29.100000 psaC gene psaC psaC 115488 115733 -1 246 SSC 0.002710 1 0 300 118 no 0.333333 2 0.500000 0.002710 1.000000 35.600000 IGS_114 igs psaC|ndhE psaC-ndhE 115734 115985 0 252 SSC 0.002699 1 5 107 126 no 1.000000 3 1.000000 0.002699 0.980159 49.100000 ndhE gene ndhE ndhE 115986 116291 -1 306 SSC 0.002179 1 0 133 89 no 0.333333 2 0.500000 0.002179 1.000000 33.200000 IGS_115 igs ndhE|ndhG ndhE-ndhG 116292 116516 0 225 SSC 0.002963 1 0 179 300 no 0.333333 2 0.500000 0.002963 1.000000 40.300000 ndhG gene ndhG ndhG 116517 117047 -1 531 SSC 0.000000 0 0 135 229 no 0.000000 1 0.000000 0.000000 1.000000 33.700000 IGS_116 igs ndhG|ndhI ndhG-ndhI 117048 117407 0 360 SSC 0.003704 2 0 300 300 no 1.000000 3 1.000000 0.003704 1.000000 56.100000 ndhI gene ndhI ndhI 117408 117908 -1 501 SSC 0.000000 0 0 117 4 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_117 igs ndhI|ndhA ndhI-ndhA 117909 117986 0 78 SSC 0.008547 1 0 300 300 no 0.333333 2 0.500000 0.008547 1.000000 45.400000 ndhA gene ndhA ndhA 117987 120135 -1 2149 SSC 0.004653 14 0 73 300 yes 1.000000 3 1.000000 0.004653 1.000000 50.800000 IGS_118 igs ndhA|ndhH ndhA-ndhH 120136 120136 0 1 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhH gene ndhH ndhH 120137 121315 -1 1179 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_119 igs ndhH|rps15 ndhH-rps15 121316 121406 0 91 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps15 gene rps15 rps15 121407 121685 -1 279 SSC 0.000000 0 0 300 158 no 0.000000 1 0.000000 0.000000 1.000000 30.600000 IGS_120 igs rps15|ycf1 rps15-ycf1 121686 126397 0 4712 SSC 0.001556 11 0 300 0 yes 1.000000 3 1.000000 0.001556 1.000000 38.900000 ycf1 gene ycf1 ycf1 126398 126991 -1 594 IRa 0.011223 10 0 73 300 no 0.333333 2 0.500000 0.011223 1.000000 43.800000 IGS_121 igs ycf1|trnN-GUU ycf1-trnN-GUU 126992 127318 0 327 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 127319 127391 1 73 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_122 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 127392 127855 0 464 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 127856 127929 -1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_123 igs trnR-ACG|trnA-UGC trnR-ACG-trnA-UGC 127930 131710 0 3781 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 131711 131745 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 132567 132604 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_126 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 132605 132668 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 132669 132703 -1 35 IRa 0.000000 0 0 300 298 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 133476 133517 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_129 igs trnI-GAU|trnV-GAC trnI-GAU-trnV-GAC 133518 135526 0 2009 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 135527 135598 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_130 igs trnV-GAC|ycf15 trnV-GAC-ycf15 135599 136278 0 680 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf15 gene ycf15 ycf15 136279 136470 1 192 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_131 igs ycf15|rps12 ycf15-rps12 136471 137428 0 958 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps12_part2 gene rps12 rps12 137429 138216 1 788 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_132 igs rps12|rps7 rps12-rps7 138217 138269 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 138270 138737 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_133 igs rps7|ndhB rps7-ndhB 138738 139026 0 289 IRa 0.000000 0 0 300 92 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 ndhB gene ndhB ndhB 139027 141230 1 2204 IRa 0.000302 1 0 300 300 no 0.333333 2 0.500000 0.000302 1.000000 45.000000 IGS_134 igs ndhB|trnL-CAA ndhB-trnL-CAA 141231 141806 0 576 IRa 0.001157 1 0 300 300 no 0.333333 2 0.500000 0.001157 1.000000 46.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 141807 141887 1 81 IRa 0.000000 0 0 238 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_135 igs trnL-CAA|ycf2 trnL-CAA-ycf2 141888 142314 0 427 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.400000 ycf2 gene ycf2 ycf2 142315 148983 -1 6669 IRa 0.000200 2 0 300 300 no 1.000000 3 1.000000 0.000200 1.000000 52.600000 IGS_136 igs ycf2|trnI-CAU ycf2-trnI-CAU 148984 149094 0 111 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 149095 149168 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_137 igs trnI-CAU|rpl23 trnI-CAU-rpl23 149169 149333 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 149334 149615 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_138 igs rpl23|rpl2 rpl23-rpl2 149616 149633 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 149634 151128 1 1495 IRa 0.000000 0 0 300 287 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_139 igs rpl2|trnH-GUG rpl2-trnH-GUG 151129 3 0 116 IRa 0.000000 0 1 300 171 no 0.333333 2 0.500000 0.000000 1.000000 38.800000