primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCTACCAACGGTATGGACGA CCTTGAAAAAGGCGCTCAAC 20 20 50.0 50.0 57.9 58.2 10.6 7.6 0.356314 4180 4878 892-910 1.000000 79.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TCTACCAACGGTATGGACGA CTTGAAAAAGGCGCTCAACC 20 20 50.0 50.0 57.9 58.2 10.6 7.6 0.356314 4180 4878 891-909 1.000000 79.7 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAGCCGAGTACTCTACCGTT CCTTGAAAAAGGCGCTCAAC 20 20 50.0 50.0 58.2 58.2 20.3 7.6 0.397463 4180 4878 826-844 1.000000 79.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT CTTGAAAAAGGCGCTCAACC 20 20 50.0 50.0 58.2 58.2 20.3 7.6 0.397463 4180 4878 825-843 1.000000 79.6 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCTACCAACGGTATGGACGA TGAAAAAGGCGCTCAACCTA 20 20 50.0 45.0 57.9 57.7 10.6 7.6 0.391276 4180 4878 889-907 1.000000 79.5 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 ACCGATCATGTCCTTCAAGC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.105939 6029 6803 840-864 1.000000 82.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CCACAACCGATCATGTCCTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.189961 6029 6803 845-869 1.000000 81.7 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 ACCGATCATGTCCTTCAAGC CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.0 57.8 0.0 16.9 0.241191 6029 6803 844-868 1.000000 81.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CCACAACCGATCATGTCCTT CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 57.9 57.8 0.0 16.9 0.325213 6029 6803 849-873 1.000000 80.6 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ATCCACAACCGATCATGTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.7 58.1 0.0 16.9 0.408164 6029 6803 847-871 1.000000 79.9 atpH-atpI_p1 atpH-atpI 1 TCCAGGTCCAATAGAAGCCA ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 58.0 57.9 0.0 21.3 0.100384 13265 14227 1068-1068 1.000000 79.9 atpH-atpI_p2 atpH-atpI 2 ATAACGGAAGCGGCAGAAAT ATAGGGGAATCCATGGAGGG 20 20 45.0 55.0 58.0 57.9 1.4 21.3 0.104185 13265 14227 1025-1025 1.000000 79.9 atpH-atpI_p3 atpH-atpI 3 TACCTTGACCAACTCCAGGT ATAGGGGAATCCATGGAGGG 20 20 50.0 55.0 57.9 57.9 0.0 21.3 0.178077 13265 14227 1081-1081 1.000000 79.2 atpH-atpI_p4 atpH-atpI 4 GATACCTTCTACGGCTTGGC ATAGGGGAATCCATGGAGGG 20 20 55.0 55.0 58.1 57.9 0.0 21.3 0.198632 13265 14227 1110-1110 1.000000 79.1 atpH-atpI_p5 atpH-atpI 5 CGATACCTTCTACGGCTTGG ATAGGGGAATCCATGGAGGG 20 20 55.0 55.0 57.9 57.9 0.0 21.3 0.201463 13265 14227 1111-1111 1.000000 79.0 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 58.0 57.6 0.0 0.0 1.413468 28631 29786 1311-1323 1.000000 69.0 petN-psbM_p2 petN-psbM 2 AGTAAGTCTTGCTTGGGCTG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.598551 28631 29786 1317-1329 1.000000 67.5 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 28631 29786 1257-1269 1.000000 66.3 petN-psbM_p4 petN-psbM 4 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTC 20 20 45.0 45.0 58.0 56.1 0.0 0.0 1.936016 28631 29786 1311-1323 1.000000 64.8 petN-psbM_p5 petN-psbM 5 AGTAAGTCTTGCTTGGGCTG TGCTACTGCACTGTTCATTC 20 20 50.0 45.0 57.8 56.1 0.0 0.0 2.121100 28631 29786 1317-1329 1.000000 63.3 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 ACACGATCAACCTCCTTTCG GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.086257 31712 32381 818-826 1.000000 80.5 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CACGATCAACCTCCTTTCGT GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.086257 31712 32381 817-825 1.000000 80.5 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 31712 32381 803-811 1.000000 79.9 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 ACACGATCAACCTCCTTTCG TGGAAAAAGCCCCTTATCGG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.218096 31712 32381 842-850 1.000000 79.4 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CACGATCAACCTCCTTTCGT TGGAAAAAGCCCCTTATCGG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.218096 31712 32381 841-849 1.000000 79.4 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 GCAGCAGGGTTTGAAAAAGG GAGAGATGGCTGAGTGGTTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.151581 36239 36434 357-357 1.000000 79.9 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 GCAGCAGGGTTTGAAAAAGG GTCTTTCGGAGAGATGGCTG 20 20 50.0 55.0 58.1 58.1 0.0 1.2 0.196980 36239 36434 365-365 1.000000 79.5 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 GCAGCAGGGTTTGAAAAAGG ATAGCCCCGGTCTTGAAAAC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.254503 36239 36434 337-337 1.000000 79.2 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 GCAGCAGGGTTTGAAAAAGG TCTTTCGGAGAGATGGCTGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.277594 36239 36434 364-364 1.000000 78.9 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 GCAGCAGGGTTTGAAAAAGG GGGTTCGAATCCCTCTCTCT 20 20 50.0 55.0 58.1 58.2 0.0 17.2 0.347155 36239 36434 288-288 1.000000 78.6 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CATTTATCCGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 21 20 47.6 50.0 58.0 58.1 8.2 0.0 1.134847 45439 46043 677-694 1.000000 74.0 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CATTTATCCGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 21 20 47.6 50.0 58.0 58.2 8.2 0.0 1.191833 45439 46043 698-715 1.000000 73.4 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CATTTATCCGCGATCTAGGCA TTCCAATGCTACGCCTTGAA 21 20 47.6 45.0 58.0 57.8 8.2 5.6 1.233148 45439 46043 648-665 1.000000 73.3 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CATTTATCCGCGATCTAGGCA ACCCTCGGTAAACAAAAGCC 21 20 47.6 50.0 58.0 58.4 8.2 0.0 1.427808 45439 46043 678-695 1.000000 71.6 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TTTATCCGCGATCTAGGCAT CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.6 58.1 8.2 0.0 1.514239 45439 46043 675-692 1.000000 70.9 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 GGGTGTCGGCCTTTTACTAG CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.0 57.9 0.0 0.0 0.152688 47024 47427 541-551 1.000000 82.0 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 TTCTGAGATCACTTCCGGGT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.194155 47024 47427 557-567 1.000000 81.6 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 GGGTGTCGGCCTTTTACTAG ATGGTCATCGGTTCGATTCC 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.260441 47024 47427 509-519 1.000000 81.3 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 TTCTGAGATCACTTCCGGGT ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.301909 47024 47427 525-535 1.000000 80.9 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 GGGTGTCGGCCTTTTACTAG TTTATGTGAGCCCGCTTAGC 20 20 55.0 50.0 58.0 58.3 0.0 0.0 0.356253 47024 47427 560-570 1.000000 80.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 47501 48210 760-760 1.000000 80.6 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 47501 48210 768-768 1.000000 80.0 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG AACCCAATCAAGTCCGTAGC 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.242165 47501 48210 784-784 1.000000 79.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 47501 48210 792-792 1.000000 79.7 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 47501 48210 800-800 1.000000 79.1 atpB-rbcL_p1 atpB-rbcL 1 CATCCAGTACCGGACCAATG AATGCCGCCAAAGTATCAGT 20 20 55.0 45.0 58.0 57.9 9.5 0.0 0.175212 55527 56241 931-959 1.000000 78.9 atpB-rbcL_p2 atpB-rbcL 2 ATCCAGTACCGGACCAATGA AATGCCGCCAAAGTATCAGT 20 20 50.0 45.0 58.1 57.9 9.5 0.0 0.254641 55527 56241 930-958 1.000000 78.3 atpB-rbcL_p3 atpB-rbcL 3 TCCAGTACCGGACCAATGAT AATGCCGCCAAAGTATCAGT 20 20 50.0 45.0 58.1 57.9 9.5 0.0 0.254641 55527 56241 929-957 1.000000 78.3 atpB-rbcL_p4 atpB-rbcL 4 AAACCCCAGGACCAGAAGTA AATGCCGCCAAAGTATCAGT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.256422 55527 56241 871-899 1.000000 78.3 atpB-rbcL_p5 atpB-rbcL 5 GATTTGAGCGATACGTCCCA AATGCCGCCAAAGTATCAGT 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.347724 55527 56241 912-940 1.000000 77.6 ycf4-cemA_p1 ycf4-cemA 1 TGCGCGTACCAATTGAAGTA GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.9 58.1 8.4 0.0 0.158370 61604 62372 868-884 1.000000 80.7 ycf4-cemA_p2 ycf4-cemA 2 AAAAAGCTGCAGAATTGGCC GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 20.4 0.0 0.251008 61604 62372 895-911 1.000000 79.9 ycf4-cemA_p3 ycf4-cemA 3 AAAGCTGCAGAATTGGCCTA GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 20.4 0.0 0.297297 61604 62372 893-909 1.000000 79.5 ycf4-cemA_p4 ycf4-cemA 4 CCCCTGACTCGTACTGATGA GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 58.2 58.1 0.0 0.0 0.312676 61604 62372 941-957 1.000000 79.3 ycf4-cemA_p5 ycf4-cemA 5 TCCCCTGACTCGTACTGATG GAGAAATCCACCAGGGCAAA 20 20 55.0 50.0 58.2 58.1 0.0 0.0 0.312676 61604 62372 942-958 1.000000 79.3 cemA_p1 cemA 1 CGAGTAATGAGGCGGTTTCA TCCCTATCCACGATTCTGCT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.092687 62373 63062 842-842 1.000000 79.5 cemA_p2 cemA 2 GTCGAGTAATGAGGCGGTTT TCCCTATCCACGATTCTGCT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.094075 62373 63062 844-844 1.000000 79.5 cemA_p3 cemA 3 GGATTGGGGAGAGTCGAGTA TCCCTATCCACGATTCTGCT 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.156939 62373 63062 856-856 1.000000 79.0 cemA_p4 cemA 4 GGAAATAGCGGATTGGGGAG TCCCTATCCACGATTCTGCT 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.190545 62373 63062 865-865 1.000000 78.8 cemA_p5 cemA 5 AATAGCGGATTGGGGAGAGT TCCCTATCCACGATTCTGCT 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.280291 62373 63062 862-862 1.000000 78.0 petB_p1 petB 1 AGTTCGACCGTGGAATTTCT AATACTATTGTCCCTCCCCC 20 20 45.0 50.0 57.2 55.6 0.0 0.0 3.187319 75610 77101 1596-1601 1.000000 55.2 petB_p2 petB 2 AGTTCGACCGTGGAATTTCT GAAATACTATTGTCCCTCCCCC 20 22 45.0 50.0 57.2 57.6 0.0 0.0 3.202197 75610 77101 1598-1603 1.000000 55.1 petB_p3 petB 3 CAGTTCGACCGTGGAATTTC AATACTATTGTCCCTCCCCC 20 20 50.0 50.0 57.1 55.6 0.0 0.0 3.228768 75610 77101 1597-1602 1.000000 54.9 petB_p4 petB 4 CAGTTCGACCGTGGAATTTC GAAATACTATTGTCCCTCCCCC 20 22 50.0 50.0 57.1 57.6 0.0 0.0 3.243645 75610 77101 1599-1604 1.000000 54.8 petB_p5 petB 5 AGTTCGACCGTGGAATTTCT AAATACTATTGTCCCTCCCCC 20 21 45.0 47.6 57.2 56.5 0.0 0.0 3.377396 75610 77101 1597-1602 1.000000 53.7 rpoA_p1 rpoA 1 CCTTCGGGGGATGGATCTAT TTGTCAGAGACGTAACCCCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.047082 78670 79683 1823-1829 1.000000 79.9 rpoA_p2 rpoA 2 CTCGAGCCGGATGATGAAAA TTGTCAGAGACGTAACCCCT 20 20 50.0 50.0 58.1 58.0 5.0 0.0 0.065396 78670 79683 1859-1865 1.000000 79.8 rpoA_p3 rpoA 3 CCTTCGGGGGATGGATCTAT GTAGGAATGGACGCATTGGT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.080099 78670 79683 2144-2150 1.000000 79.7 rpoA_p4 rpoA 4 CCTTCGGGGGATGGATCTAT AAGGGATGCAGCATTACGAG 20 20 55.0 50.0 58.0 58.0 0.0 9.9 0.082670 78670 79683 1873-1879 1.000000 79.6 rpoA_p5 rpoA 5 CCTTCGGGGGATGGATCTAT GAAGGGATGCAGCATTACGA 20 20 55.0 50.0 58.0 58.0 0.0 9.9 0.088153 78670 79683 1874-1880 1.000000 79.6 rpl16_p1 rpl16 1 GGCCCCTTTCCTTTAGTTCC AGGGTTGAATAACAATTCGATTGA 20 24 55.0 33.3 58.2 56.9 0.0 12.5 5.229629 81995 83343 1404-1414 1.000000 40.9 rpl16_p2 rpl16 2 GGGCCCCTTTCCTTTAGTTC AGGGTTGAATAACAATTCGATTGA 20 24 55.0 33.3 58.2 56.9 12.2 12.5 5.229629 81995 83343 1405-1415 1.000000 40.9 rpl16_p3 rpl16 3 GGCCCCTTTCCTTTAGTTCC GGGTTGAATAACAATTCGATTGAC 20 24 55.0 37.5 58.2 56.9 0.0 12.5 5.259938 81995 83343 1403-1413 1.000000 40.9 rpl16_p4 rpl16 4 CAAGGGCCCCTTTCCTTTAG AGGGTTGAATAACAATTCGATTGA 20 24 55.0 33.3 58.1 56.9 21.4 12.5 5.225648 81995 83343 1408-1418 1.000000 40.8 rpl16_p5 rpl16 5 CAAGGGCCCCTTTCCTTTAG GGGTTGAATAACAATTCGATTGAC 20 24 55.0 37.5 58.1 56.9 21.4 12.5 5.255957 81995 83343 1407-1417 1.000000 40.8 rps12-trnV-GAC_p1 rps12-trnV-GAC 1 GATCGCTAGCCAGAAGAAGG CCTGCAGGAACATTCACAGT 20 20 55.0 50.0 57.9 58.1 9.7 29.9 0.245845 102049 102168 227-235 1.000000 81.8 rps12-trnV-GAC_p2 rps12-trnV-GAC 2 AGGACGGAGAGTAAGCTTGA CCTGCAGGAACATTCACAGT 20 20 50.0 50.0 57.8 58.1 9.9 29.9 0.315919 102049 102168 204-212 1.000000 81.7 rps12-trnV-GAC_p3 rps12-trnV-GAC 3 GATCGCTAGCCAGAAGAAGG GTTTAGCGGACCTTTGGGAA 20 20 55.0 50.0 57.9 58.1 9.7 0.0 0.247190 102049 102168 298-306 1.000000 80.9 rps12-trnV-GAC_p4 rps12-trnV-GAC 4 GATCGCTAGCCAGAAGAAGG TTAGCGGACCTTTGGGAATG 20 20 55.0 50.0 57.9 57.9 9.7 0.0 0.270219 102049 102168 296-304 1.000000 80.8 rps12-trnV-GAC_p5 rps12-trnV-GAC 5 AGGACGGAGAGTAAGCTTGA GTTTAGCGGACCTTTGGGAA 20 20 50.0 50.0 57.8 58.1 9.9 0.0 0.317265 102049 102168 275-283 1.000000 80.6 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG AAAATGGTTAACCCCGTCGA 20 20 55.0 45.0 58.0 57.4 0.0 22.0 0.567377 114839 115904 1875-1902 1.000000 76.8 ycf1_p2 ycf1 2 ACTGAGGAACAACGGCAAAT AAAATGGTTAACCCCGTCGA 20 20 45.0 45.0 58.0 57.4 0.0 22.0 0.583789 114839 115904 1870-1897 1.000000 76.7 ycf1_p3 ycf1 3 GAGGAACAACGGCAAATTCG AAAATGGTTAACCCCGTCGA 20 20 50.0 45.0 58.0 57.4 0.0 22.0 0.601299 114839 115904 1867-1894 1.000000 76.6 ycf1_p4 ycf1 4 GAGCTACTGAGGAACAACGG CAAAATGGTTAACCCCGTCG 20 20 55.0 50.0 58.0 57.4 0.0 22.0 0.624877 114839 115904 1876-1903 1.000000 76.4 ycf1_p5 ycf1 5 ACTGAGGAACAACGGCAAAT CAAAATGGTTAACCCCGTCG 20 20 45.0 50.0 58.0 57.4 0.0 22.0 0.641290 114839 115904 1871-1898 1.000000 76.2 ndhF_p1 ndhF 1 AAAAGAGAAAAACCTCTGGT ATATAAGAGCCGGTGAATCG 20 20 35.0 45.0 52.5 54.8 0.0 1.9 8.694679 115907 118135 2319-2319 0.500000 20.0 ndhF_p2 ndhF 2 AAAAAGAGAAAAACCTCTGGT ATATAAGAGCCGGTGAATCG 21 20 33.3 45.0 53.4 54.8 0.0 1.9 8.741333 115907 118135 2320-2320 0.500000 20.0 ndhF_p3 ndhF 3 AAAAGAGAAAAACCTCTGGT CGGTGAATCGGAAACAATTA 20 20 35.0 40.0 52.5 54.0 0.0 0.0 9.502036 115907 118135 2309-2309 0.500000 20.0 ndhF_p4 ndhF 4 AAAAGAGAAAAACCTCTGGT CGGTGAATCGGAAACAATTAAAC 20 23 35.0 39.1 52.5 57.0 0.0 0.0 9.517450 115907 118135 2309-2309 0.500000 20.0 ndhF_p5 ndhF 5 AAAAAGAGAAAAACCTCTGGT CGGTGAATCGGAAACAATTA 21 20 33.3 40.0 53.4 54.0 0.0 0.0 9.548689 115907 118135 2310-2310 0.500000 20.0 ccsA_p1 ccsA 1 TCCATTGTTGGGAGACATCC TGCGTATTGAGTTTGTAAGACCT 20 23 50.0 39.1 57.2 58.1 0.0 0.0 3.916857 119421 120404 1047-1052 1.000000 49.7 ccsA_p2 ccsA 2 CCATTGTTGGGAGACATCCT TGCGTATTGAGTTTGTAAGACCT 20 23 50.0 39.1 57.2 58.1 0.0 0.0 3.924718 119421 120404 1046-1051 1.000000 49.6 ccsA_p3 ccsA 3 TCCATTGTTGGGAGACATCC TGCGTATTGAGTTTGTAAGACC 20 22 50.0 40.9 57.2 56.7 0.0 0.0 4.069908 119421 120404 1047-1052 1.000000 48.4 ccsA_p4 ccsA 4 CCATTGTTGGGAGACATCCT TGCGTATTGAGTTTGTAAGACC 20 22 50.0 40.9 57.2 56.7 0.0 0.0 4.077768 119421 120404 1046-1051 1.000000 48.4 ccsA_p5 ccsA 5 TTCCATTGTTGGGAGACATCC TGCGTATTGAGTTTGTAAGACCT 21 23 47.6 39.1 57.9 58.1 0.0 0.0 4.195864 119421 120404 1048-1053 1.000000 47.4 ccsA-ndhD_p1 ccsA-ndhD 1 GCAATTGTGGCTTCTATGGG TCAATTGACAAGGTCGAAGCT 20 21 50.0 42.9 57.1 57.9 7.4 3.4 2.003044 120405 120553 310-317 1.000000 68.3 ccsA-ndhD_p2 ccsA-ndhD 2 GGGCTGCATAGTTATGGTTCA TCAATTGACAAGGTCGAAGCT 21 21 47.6 42.9 58.1 57.9 0.5 3.4 2.195051 120405 120553 241-248 1.000000 68.0 ccsA-ndhD_p3 ccsA-ndhD 3 AGGGCTGCATAGTTATGGTTC TCAATTGACAAGGTCGAAGCT 21 21 47.6 42.9 57.8 57.9 0.5 3.4 2.340697 120405 120553 242-249 1.000000 66.8 ccsA-ndhD_p4 ccsA-ndhD 4 GCAATTGTGGCTTCTATGGG TCAATTGACAAGGTCGAAGC 20 20 50.0 45.0 57.1 56.4 7.4 3.4 2.512270 120405 120553 310-317 1.000000 64.2 ccsA-ndhD_p5 ccsA-ndhD 5 GCAATTGTGGCTTCTATGGG CAATTGACAAGGTCGAAGCT 20 20 50.0 45.0 57.1 56.4 7.4 0.0 2.522005 120405 120553 309-316 1.000000 64.2 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 GCTTGTGTTTCAATGACGGG GATCGCTAGCCAGAAGAAGG 20 20 50.0 55.0 57.9 57.9 0.0 9.7 0.197913 147090 147209 338-346 1.000000 81.0 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GTTTAGCGGACCTTTGGGAA GATCGCTAGCCAGAAGAAGG 20 20 50.0 55.0 58.1 57.9 0.0 9.7 0.247190 147090 147209 298-306 1.000000 80.9 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 TTAGCGGACCTTTGGGAATG GATCGCTAGCCAGAAGAAGG 20 20 50.0 55.0 57.9 57.9 0.0 9.7 0.270219 147090 147209 296-304 1.000000 80.8 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 GCTTGTGTTTCAATGACGGG AGGACGGAGAGTAAGCTTGA 20 20 50.0 50.0 57.9 57.8 0.0 9.9 0.267987 147090 147209 315-323 1.000000 80.6 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 GTTTAGCGGACCTTTGGGAA AGGACGGAGAGTAAGCTTGA 20 20 50.0 50.0 58.1 57.8 0.0 9.9 0.317265 147090 147209 275-283 1.000000 80.6