primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 992 1176 252-274 1.000000 84.8 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.199180 992 1176 266-288 1.000000 84.5 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 992 1176 265-287 1.000000 84.5 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 992 1176 267-289 1.000000 84.5 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG TCCTCTAGACCTAGCTGCTG 20 20 55.0 55.0 58.1 57.6 0.0 13.4 0.485584 992 1176 253-275 1.000000 82.5 trnK-UUU_p1 trnK-UUU 1 ACTCCCAAGCACACGAATTT TGTCCGAGCGGTTTGATTTT 20 20 45.0 45.0 58.0 58.4 0.0 9.0 0.418720 2440 5075 2936-2993 1.000000 79.5 trnK-UUU_p2 trnK-UUU 2 ACTCCCAAGCACACGAATTT TTGTCCGAGCGGTTTGATTT 20 20 45.0 45.0 58.0 58.4 0.0 9.0 0.418720 2440 5075 2937-2994 1.000000 79.5 trnK-UUU_p3 trnK-UUU 3 ACTCCCAAGCACACGAATTT TTTGTCCGAGCGGTTTGATT 20 20 45.0 45.0 58.0 58.4 0.0 9.0 0.418720 2440 5075 2938-2995 1.000000 79.5 trnK-UUU_p4 trnK-UUU 4 ACTCCCAAGCACACGAATTT TTTTGTCCGAGCGGTTTGAT 20 20 45.0 45.0 58.0 58.4 0.0 9.0 0.418720 2440 5075 2939-2996 1.000000 79.5 trnK-UUU_p5 trnK-UUU 5 ACTCCCAAGCACACGAATTT ATTTTTGTCCGAGCGGTTTG 20 20 45.0 45.0 58.0 57.6 0.0 9.0 0.434441 2440 5075 2941-2998 1.000000 79.4 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCCCTCGCTTCATCCAAATG AGGAACTGTTCGGGATCTTT 20 20 50.0 45.0 58.0 56.5 0.0 13.9 1.591763 5076 5784 814-833 1.000000 70.8 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCGATGGTATGGACGAATCC AGGAACTGTTCGGGATCTTT 20 20 55.0 45.0 57.9 56.5 0.0 13.9 1.629363 5076 5784 831-850 1.000000 70.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CGATGGTATGGACGAATCCC AGGAACTGTTCGGGATCTTT 20 20 55.0 45.0 57.9 56.5 0.0 13.9 1.629363 5076 5784 830-849 1.000000 70.5 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT AGGAACTGTTCGGGATCTTT 20 20 50.0 45.0 58.2 56.5 20.3 13.9 1.717497 5076 5784 769-788 1.000000 70.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAAGCCGAGTACTCTACCGT AGGAACTGTTCGGGATCTTT 20 20 50.0 45.0 58.2 56.5 20.3 13.9 1.717497 5076 5784 770-789 1.000000 70.0 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10717 10852 209-216 1.000000 69.4 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10717 10852 212-219 1.000000 69.1 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 10717 10852 215-222 1.000000 68.6 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 10717 10852 218-225 1.000000 68.3 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 10717 10852 213-220 1.000000 66.9 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.233476 29159 29876 774-777 1.000000 80.3 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.432990 29159 29876 835-838 1.000000 78.5 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGGGACTGCAAATCCTTTT AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 58.4 58.2 14.7 0.0 0.506839 29159 29876 792-795 1.000000 78.1 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.4 57.6 14.7 0.0 0.706353 29159 29876 853-856 1.000000 76.3 trnC-GCA-petN_p5 trnC-GCA-petN 5 TTTCCCCAGTTCAAATCCGG GCCCAAGCGAGACTTACTAT 20 20 50.0 50.0 58.1 57.1 0.0 0.0 0.974912 29159 29876 773-776 1.000000 74.4 petN-psbM_p1 petN-psbM 1 TAGTAAGTCTCGCTTGGGCT TGCTACTGCACTGTTCATCC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.250489 29967 31102 1310-1344 1.000000 79.0 petN-psbM_p2 petN-psbM 2 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATCC 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.450004 29967 31102 1249-1283 1.000000 77.4 petN-psbM_p3 petN-psbM 3 TAGTAAGTCTCGCTTGGGCT GCTACTGCACTGTTCATCCT 20 20 50.0 50.0 58.2 57.6 0.0 0.0 0.544620 29967 31102 1309-1343 1.000000 76.6 petN-psbM_p4 petN-psbM 4 ATGGGGAAGAAGTGGACTCT GCTACTGCACTGTTCATCCT 20 20 50.0 50.0 57.6 57.6 0.0 0.0 0.744134 29967 31102 1248-1282 1.000000 75.1 petN-psbM_p5 petN-psbM 5 ATAGTAAGTCTCGCTTGGGC TGCTACTGCACTGTTCATCC 20 20 50.0 50.0 57.1 57.9 0.0 0.0 0.991926 29967 31102 1311-1345 1.000000 73.0 trnG-UCC-trnfM-CAU_p1 trnG-UCC-trnfM-CAU 1 ATGCGGATATGGTCGAATGG CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 57.9 58.0 0.0 4.2 0.137348 38246 38439 292-301 1.000000 83.2 trnG-UCC-trnfM-CAU_p2 trnG-UCC-trnfM-CAU 2 TCTTTGCCAAGGAGAAGACG CTTGAGGTCACGGGTTCAAA 20 20 50.0 50.0 57.8 58.0 0.0 4.2 0.208039 38246 38439 263-272 1.000000 83.1 trnG-UCC-trnfM-CAU_p3 trnG-UCC-trnfM-CAU 3 ATGCGGATATGGTCGAATGG GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.124730 38246 38439 328-337 1.000000 82.9 trnG-UCC-trnfM-CAU_p4 trnG-UCC-trnfM-CAU 4 TCTTTGCCAAGGAGAAGACG GGGTAGAGCAGTTTGGTAGC 20 20 50.0 55.0 57.8 58.0 0.0 0.0 0.195421 38246 38439 299-308 1.000000 82.7 trnG-UCC-trnfM-CAU_p5 trnG-UCC-trnfM-CAU 5 ATGCGGATATGGTCGAATGG TGAGGTCACGGGTTCAAATC 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.278053 38246 38439 290-299 1.000000 82.1 trnL-UAA-trnF-GAA_p1 trnL-UAA-trnF-GAA 1 ACATGTCAATACCGGCAACA TCTACCAGCTGAGCTATCCC 20 20 45.0 55.0 57.8 58.0 0.0 17.4 0.195169 49957 50318 475-475 1.000000 79.6 trnL-UAA-trnF-GAA_p2 trnL-UAA-trnF-GAA 2 ACATGTCAATACCGGCAACA TTTGAACTGGTGACACGAGG 20 20 45.0 50.0 57.8 58.1 0.0 20.1 0.244559 49957 50318 511-511 1.000000 79.1 trnL-UAA-trnF-GAA_p3 trnL-UAA-trnF-GAA 3 ACATGTCAATACCGGCAACA GTGCCAGGAACCAGATTTGA 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.282964 49957 50318 526-526 1.000000 78.8 trnL-UAA-trnF-GAA_p4 trnL-UAA-trnF-GAA 4 ACATGTCAATACCGGCAACA TCAGTCCTCTGCTCTACCAG 20 20 45.0 55.0 57.8 57.9 0.0 0.0 0.328962 49957 50318 487-487 1.000000 78.5 trnL-UAA-trnF-GAA_p5 trnL-UAA-trnF-GAA 5 ACATGTCAATACCGGCAACA CATGTGCCAGGAACCAGATT 20 20 45.0 50.0 57.8 58.2 0.0 0.0 0.349295 49957 50318 529-529 1.000000 78.3 petA-psbJ_p1 petA-psbJ 1 CTTACGTGTCCAAGGCCTTT GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 58.1 58.1 17.6 0.0 1.201437 64488 65464 1033-1167 1.000000 75.9 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTGGC GCTGGTATTCTTGTGATCGGT 20 21 50.0 47.6 57.8 58.1 0.0 0.0 1.248500 64488 65464 1020-1154 1.000000 75.5 petA-psbJ_p3 petA-psbJ 3 CTTACGTGTCCAAGGCCTTT AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 58.1 57.8 17.6 0.0 1.293037 64488 65464 1034-1168 1.000000 75.2 petA-psbJ_p4 petA-psbJ 4 GGCCTTTTGTTCTTCTTGGC AGCTGGTATTCTTGTGATCGG 20 21 50.0 47.6 57.8 57.8 0.0 0.0 1.340100 64488 65464 1021-1155 1.000000 74.8 petA-psbJ_p5 petA-psbJ 5 GATCCCTTACGTGTCCAAGG GCTGGTATTCTTGTGATCGGT 20 21 55.0 47.6 57.7 58.1 7.7 0.0 1.404770 64488 65464 1038-1172 1.000000 74.3 trnW-CCA-trnP-UGG_p1 trnW-CCA-trnP-UGG 1 GCGTTCTACCGAACTGAACT CTTGGTAGCGCGTTTGTTTT 20 20 50.0 45.0 57.9 57.9 0.0 8.4 0.175650 67816 67972 239-244 1.000000 85.6 trnW-CCA-trnP-UGG_p2 trnW-CCA-trnP-UGG 2 GCGTTCTACCGAACTGAACT CGCGTTTGTTTTGGGTACAA 20 20 50.0 45.0 57.9 57.8 0.0 0.0 0.252065 67816 67972 231-236 1.000000 85.2 trnW-CCA-trnP-UGG_p3 trnW-CCA-trnP-UGG 3 GCGTTCTACCGAACTGAACT TTGGTAGCGCGTTTGTTTTG 20 20 50.0 45.0 57.9 58.2 0.0 8.4 0.232908 67816 67972 238-243 1.000000 85.1 trnW-CCA-trnP-UGG_p4 trnW-CCA-trnP-UGG 4 ACCTACGACATCGGGTTTTG CTTGGTAGCGCGTTTGTTTT 20 20 50.0 45.0 57.9 57.9 6.2 8.4 0.202860 67816 67972 266-271 1.000000 84.6 trnW-CCA-trnP-UGG_p5 trnW-CCA-trnP-UGG 5 ACCTACGACATCGGGTTTTG TTGGTAGCGCGTTTGTTTTG 20 20 50.0 45.0 57.9 58.2 6.2 8.4 0.260118 67816 67972 265-270 1.000000 84.2 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 AAAACAAACGCGCTACCAAG GGTGCCACGGAAAGATATGT 20 20 45.0 50.0 57.9 58.0 5.7 0.0 0.152297 68047 68425 449-449 1.000000 79.7 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CAAAACAAACGCGCTACCAA GGTGCCACGGAAAGATATGT 20 20 45.0 50.0 58.2 58.0 5.7 0.0 0.209555 68047 68425 450-450 1.000000 79.2 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 TTGTACCCAAAACAAACGCG GGTGCCACGGAAAGATATGT 20 20 45.0 50.0 57.8 58.0 3.5 0.0 0.228712 68047 68425 457-457 1.000000 79.0 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 AAAACAAACGCGCTACCAAG GACCTGCTAAAGACCCGAAC 20 20 45.0 55.0 57.9 58.3 5.7 0.0 0.390691 68047 68425 487-487 1.000000 77.7 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TACCCAAAACAAACGCGCTA GGTGCCACGGAAAGATATGT 20 20 45.0 50.0 58.4 58.0 5.7 0.0 0.447454 68047 68425 454-454 1.000000 77.3 psbT-psbN_p1 psbT-psbN 1 GAGAACCGCCTAAAGTTCCA TCGAGGAACATGGGGACTAG 20 20 50.0 55.0 57.5 58.2 0.0 0.0 0.690904 75730 75815 138-138 1.000000 76.8 psbT-psbN_p2 psbT-psbN 2 GAGAACCGCCTAAAGTTCCA TTCGAGGAACATGGGGACTA 20 20 50.0 50.0 57.5 57.8 0.0 0.0 0.708847 75730 75815 139-139 1.000000 76.6 psbT-psbN_p3 psbT-psbN 3 GAGAACCGCCTAAAGTTCCA GATCCCTTCGAGGAACATGG 20 20 50.0 55.0 57.5 57.8 0.0 0.0 0.714285 75730 75815 145-145 1.000000 76.5 psbT-psbN_p4 psbT-psbN 4 GAGAACCGCCTAAAGTTCCA GGGTACGCCTTATATACCGC 20 20 50.0 55.0 57.5 57.7 0.0 0.0 0.751829 75730 75815 193-193 1.000000 75.6 psbT-psbN_p5 psbT-psbN 5 GAGAACCGCCTAAAGTTCCA GTTTTACCGGGTACGCCTTA 20 20 50.0 50.0 57.5 57.6 0.0 6.3 0.846011 75730 75815 201-201 1.000000 74.8 rps11-rpl36_p1 rps11-rpl36 1 CCCCTTTGGTATTCTCCGTG ATTTGTTCCAACCCAAGACA 20 20 55.0 40.0 58.0 55.3 0.0 0.0 2.693490 80872 80988 240-240 1.000000 59.5 rps11-rpl36_p2 rps11-rpl36 2 CCCCTTTGGTATTCTCCGTG TTTGTTCCAACCCAAGACAT 20 20 55.0 40.0 58.0 55.3 0.0 0.0 2.693490 80872 80988 239-239 1.000000 59.5 rps11-rpl36_p3 rps11-rpl36 3 CCCCTTTGGTATTCTCCGTG AATTTGTTCCAACCCAAGACA 20 21 55.0 38.1 58.0 56.2 0.0 0.0 2.880162 80872 80988 241-241 1.000000 58.0 rps11-rpl36_p4 rps11-rpl36 4 CCCCTTTGGTATTCTCCGTG ATTTGTTCCAACCCAAGACAT 20 21 55.0 38.1 58.0 55.9 0.0 0.0 3.105385 80872 80988 240-240 1.000000 56.2 rps11-rpl36_p5 rps11-rpl36 5 CCCCTTTGGTATTCTCCGTG GTTCCAACCCAAGACATAAACA 20 22 55.0 40.9 58.0 56.8 0.0 0.0 3.232399 80872 80988 236-236 1.000000 55.2 ycf2_p1 ycf2 1 TGCATGTATTAGATATATCCTGTCGA GGCCCGGGAAACAAAGATAA 26 20 34.6 50.0 57.5 58.2 9.2 29.3 6.677747 91136 91285 260-260 1.000000 42.5 ycf2_p2 ycf2 2 TGCATGTATTAGATATATCCTGTCG GGCCCGGGAAACAAAGATAA 25 20 36.0 50.0 56.2 58.2 9.2 29.3 6.930097 91136 91285 260-260 1.000000 42.5 ycf2_p3 ycf2 3 GCATGTATTAGATATATCCTGTCGA GGCCCGGGAAACAAAGATAA 25 20 36.0 50.0 56.0 58.2 9.2 29.3 7.165243 91136 91285 259-259 1.000000 42.5 ycf2_p4 ycf2 4 TGCATGTATTAGATATATCCTGTCGAA GGCCCGGGAAACAAAGATAA 27 20 33.3 50.0 58.0 58.2 9.2 29.3 7.191080 91136 91285 260-260 1.000000 42.5 ycf2_p5 ycf2 5 TGCATGTATTAGATATATCCTGTCGA TGTAACTCACTAGAGGCCCG 26 20 34.6 55.0 57.5 58.5 9.2 0.0 7.048680 91136 91285 274-274 1.000000 42.3 ycf1_p1 ycf1 1 CCCGGAACTTCTTCGTAGTG AAAATCTGCAGGTAGTGGGC 20 20 55.0 50.0 58.0 58.2 0.7 15.1 0.168407 109820 111740 2331-2331 0.333333 52.0 ycf1_p2 ycf1 2 CCGGAACTTCTTCGTAGTGG AAAATCTGCAGGTAGTGGGC 20 20 55.0 50.0 58.0 58.2 0.0 15.1 0.168407 109820 111740 2330-2330 0.333333 52.0 ycf1_p3 ycf1 3 CAATTGTGGACTCTCGGGAG AAAATCTGCAGGTAGTGGGC 20 20 55.0 50.0 58.0 58.2 11.8 15.1 0.176312 109820 111740 2785-2785 0.333333 51.9 ycf1_p4 ycf1 4 ATCTCCCCAGGTAGGATTCG AAAATCTGCAGGTAGTGGGC 20 20 55.0 50.0 58.0 58.2 0.0 15.1 0.177481 109820 111740 2487-2487 0.333333 51.9 ycf1_p5 ycf1 5 TCAAAGCGAGCCCTTTTCTT AAAATCTGCAGGTAGTGGGC 20 20 45.0 50.0 58.0 58.2 0.0 15.1 0.179320 109820 111740 2540-2540 0.333333 51.9 ycf1-ndhF_p1 ycf1-ndhF 1 CCCTGCCCACACTAGAAAAA GTGGGCGCATCTCTTCTTAT 20 20 50.0 50.0 57.7 57.8 0.0 10.8 0.533083 111741 111782 854-885 1.000000 79.8 ycf1-ndhF_p2 ycf1-ndhF 2 CCCTGCCCACACTAGAAAAA GGGGAATAAGAGGATTGGCC 20 20 50.0 55.0 57.7 57.7 0.0 0.0 0.580814 111741 111782 974-1005 1.000000 79.3 ycf1-ndhF_p3 ycf1-ndhF 3 CCCTGCCCACACTAGAAAAA TGTTCGTTGGATCCCTAGGA 20 20 50.0 50.0 57.7 57.8 0.0 11.5 0.527645 111741 111782 1328-1359 1.000000 78.8 ycf1-ndhF_p4 ycf1-ndhF 4 CCCTGCCCACACTAGAAAAA AAAATCTGCAGGTAGTGGGC 20 20 50.0 50.0 57.7 58.2 0.0 15.1 0.446941 111741 111782 868-868 0.333333 49.8 ycf1-ndhF_p5 ycf1-ndhF 5 CTCATGAAGGCCTACCGTTG AAAATCTGCAGGTAGTGGGC 20 20 55.0 50.0 58.3 58.2 5.2 15.1 0.503924 111741 111782 166-166 0.333333 49.3 ndhF-rpl32_p1 ndhF-rpl32 1 GTTGCCGACGGAAAAAGAAG TAAGGCTGCCCAATATCCCT 20 20 50.0 50.0 58.0 58.2 20.5 16.6 0.199227 114006 115079 1207-1259 1.000000 84.2 ndhF-rpl32_p2 ndhF-rpl32 2 TGCCGACGGAAAAAGAAGAA TAAGGCTGCCCAATATCCCT 20 20 45.0 50.0 58.0 58.2 20.5 16.6 0.210516 114006 115079 1205-1257 1.000000 84.1 ndhF-rpl32_p3 ndhF-rpl32 3 TTGCCGACGGAAAAAGAAGA TAAGGCTGCCCAATATCCCT 20 20 45.0 50.0 58.0 58.2 20.5 16.6 0.210516 114006 115079 1206-1258 1.000000 84.1 ndhF-rpl32_p4 ndhF-rpl32 4 GTTGCCGACGGAAAAAGAAG GACAACGCTTTTAAGGCTGC 20 20 50.0 50.0 58.0 58.3 20.5 0.0 0.345950 114006 115079 1218-1270 1.000000 83.0 ndhF-rpl32_p5 ndhF-rpl32 5 AAAAGAAGAAGTCCCGCTCC TAAGGCTGCCCAATATCCCT 20 20 50.0 50.0 57.8 58.2 0.0 16.6 0.353345 114006 115079 1195-1247 1.000000 83.0