Hotspot

trnT-UGU-trnL-UAA

LSC · 47797-48884 · 1088 bp

Back to Oreocnide

Pi 0.0036
MarkerSeek score 55.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1133-1208 bp 1.0 82.5
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 1164-1239 bp 1.0 82.2
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1141-1216 bp 1.0 81.9
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 1172-1247 bp 1.0 81.6
trnT-UGU-trnL-UAA_p5 TGGAGAAAAGCCAGCTATCG ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1184-1259 bp 1.0 80.9